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Query: sp|Q96T21|SEBP2_HUMAN Selenocysteine insertion sequence-binding protein 2 OS=Homo sapiens GN=SECISBP2 PE=1 SV=2, from NEW_HUMAN_DOMAINS

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MASEGPREPESEGIKLSADVKPFVPRFAGLNVAWLESSEACVFPSSAATYYPFVQEPPVTEQKIYTEDMAFGASTFPPQYLSSEITLHPYAYSPYTLDSTQNVYSVPGSQYLYNQPSCYRGFQTVKHRNENTCPLPQEMKALFKKKTYDLast
1 -9.240PF02159.15; F7CHI9_MONDO/42-176; Oestrogen receptor  ali follow..  10  26........................................................................APVYGSSNLTYNPSSETFSSNGLGGFHSLNNVSPSPLVLLHPPPQLSPFLHHHSQQVPYYLENEQSGYAMREAAP.. 100
2 -8.960PF14944.6; F6PHN7_XENTR/1-245; Tongue Cancer Chemotherapy Resistant Protein 1  ali follow..  1...............MNPVYSPGSSGVPYANAK-FPMGYAAAAPAYSPNMYAGPNPAFQPDTRFLHP----YMLLWTQTIIHCSRKGNFQLPLSRGTSNRNGKVSGAIFRYTPGTPYKVSCSPTSGTVPPYSSSPNPYQTAVYPVRS.. 139
3 -8.370PF18126.1; A0A060SJI2_PYCCI/6-169; Mitochondrial ribosomal protein mL59  ali follow..  25  7RLRELPRILKTKPNARPKVVNPFLPRKNPDSGRWAP-------PKYS...................................................................................................... 46
4 -7.580PF18601.1; A0A0G2FQC9_9PEZI/2-83; EZH2 N-terminal domain  ali follow..  21  15.ANSGRKKMAYEVVCIKSDKPR-VPEYK----HHVEISRNILTPNTMLKFIPHLRDMKDNEEERYT................................................................................... 75
5 -7.440PF02165.15; Q9PUT7_DANRE/1-291; Wilm`s tumour protein  ali follow..  10  140.......DGASNYGHTPSHHTPQFPNHSTQQSNMGDQQYPVPPPVYGCHTDSCTGSQALLLRNPYNSSDNLYQMASQLECMGWN-STIKSHPGGYESDPSTPMVYSCSTQYRIHTHGVFRGLQD-VRRVPGITPAIVRSTETNEKR... 291
6 -6.730PF16056.5; B4JX46_DROGR/64-449; Domain of unknown function (DUF4799 topsan)  ali follow..  15  37.YSASASSSSCPRTPLLRDLSNIMTPATPTTTA-PTTVYASTLPTFEAEFSP................................................................................................. 96
7 -6.440PF08192.11; SSY5_YEAST/2-693; Peptidase family S64  ali follow..  6LNKKKNEEKENTDLPADNEQNAAETSSSNVSGNEERIDPN--------SHDTNPENANNDDASTTFGSSIQSSSIFSRGRMTYGTGASSSMATSEMRSHSSGHSGSKNSKNLQGFKDVGKPLRAVSFLSPVKEEESQDTQNTLDVSSS. 145
8 -6.150PF03821.16; H0V9D9_CAVPO/28-261; Golgi 4-transmembrane spanning transporter  ali follow..  11  190....KYMNSASERSDSKSPPKVVLPSYEAISLPSKSPVGGPAPPPYS...................................................................................................... 233
9 -6.030PF03303.13; WTF23_SCHPO/1-275; WTF protein  ali follow..  8LRSSMDELSAKNDNEIDLEKGP-LPEY--------NSEDGSTLPPYSENINLKDPKQMGANNPNLFNTDESTTPPDYGEDSLSITHRENHSSGTADNSSTSP............................................... 100
10 -5.860PF11893.8; J7TLV1_MORMO/5-252; Domain of unknown function (DUF3413 topsan)  ali follow..  178...................TSHIMYIWADANFYRPVTMQRYNLPVS----YPMTARKFLERHGLLDSTSYEQQLLLHGDPTAQGVEYPINK.......................................................... 245

FFAS is supported by the NIH grant R01-GM087218-01
1 3 3 6 3 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Flexible structure alignment by chaining aligned fragment pairs allowing twists. Bioinformatics. 2003 Oct;19 Suppl 2:II246-II255.