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Query: sp|Q96T21|SEBP2_HUMAN Selenocysteine insertion sequence-binding protein 2 OS=Homo sapiens GN=SECISBP2 PE=1 SV=2 (Range: 1-149), from NEW_HUMAN_DOMAINS

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MASEGPREPESEGIKLSADVKPFVPRFAGLNVAWLESSEACVFPSSAATYYPFVQEPPVTEQKIYTEDMAFGASTFPPQYLSSEITLHPYAYSPYTLDSTQNVYSVPGSQYLYNQPSCYRGFQTVKHRNENTCPLPQEMKALFKKKTYDLast
1 -5.900d2etsa1 a.24.26.1 (A:1-110) Hypothetical protein MW1337 {Staphylococcus aureus [TaxId: 1280]}  ali model 3D-neighbors follow..  22......VKSQQQDHDFYQTVKPYTEHIDSILNEIKLHREFIIEVPYM...................................................................................................... 62
2 -5.720d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  8LQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDV......................................................................................... 67
3 -5.650d2inba1 c.52.1.32 (A:5-139) FdxN element excision controlling factor protein {Nostoc punctiforme [TaxId: 272131]}  ali model 3D-neighbors follow..  19  36LGAEKLIAAEREGEKIAVEVKSFLERSSAISEFHTALGQFINYRGALRRRQP................................................................................................. 87
4 -5.450d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  10  8LQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTPVSKLHFRVWSHQ................................................................................. 75
5 -5.290d2cnza_ b.2.3.2 (A:) automated matches {Salmonella typhimurium [TaxId: 90371]}  ali model 3D-neighbors follow..  12  99VLTGPAQNVTADTYPITLDVVGYQP............................................................................................................................ 123
6 -5.230d1ftra2 d.58.33.1 (A:149-296) Formylmethanofuran:tetrahydromethanopterin formyltransferase {Methanopyrus kandleri [TaxId: 2320]}  ali model 3D-neighbors follow..  31.GLQAAEAAVDAIKGVEGAYAPFPGGIVASASKVGSKQYDFLPASTNDAYCPTVEDNELPEGVKCVYEIVINGLNEEAVKEAMRVGIEAACQQPGVVKISAGNFGGKLGQYE..................................... 141
7 -5.080d1p2fa2 c.23.1.1 (A:3-120) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  29  75LTLLSDDESVLKGFEAGADTKPFNPEI.......................................................................................................................... 104
8 -4.980d2q9qb1 a.278.1.4 (B:21-165) GINS complex subunit 4, SLD5 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  18  87VLEKEKTRPEGEPSSLSPEELAFAREFMANTESYLKNVALKHMPPNLQK.................................................................................................... 135
9 -4.960d3tewa1 f.60.1.1 (A:226-735) Anthrax protective antigen C-terminal-like {Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]}  ali model 3D-neighbors follow..  12  2................STASDPYSDFEKVTGRIDKNVSPEARHP--LVAAYPIVHVDMENIILSKNEDQSTQNTDSQTRTISKNTSTSRTHTSEPGSNSNSSTVAIDHSLSLAGERTWAETMGLNTADTAR.................. 114
10 -4.940d2jbaa_ c.23.1.1 (A:) automated matches {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  33  81LTARGEEEDRVRGLETGADTKPFSPKE.......................................................................................................................... 110

FFAS is supported by the NIH grant R01-GM087218-01
1 2 9 7 3 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhi D, Krishna SS, Cao H, Pevzner P, Godzik A. Representing and comparing protein structures as paths in three-dimensionalspace. BMC Bioinformatics. 2006 Oct 20;7:460.