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Query: 2q0j_A mol:protein length:321 Quinolone signal response protein, from PDB0516

Results of FFAS03 search in PDB0516
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSSSGLVPRGSHMLRLSAPGQLDDDLCLLGDVQVPVFLLRLGEASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDVRRRRLFCGDALGEFDEAEGVWRPLVFDDMEAYLESLERLQRLPTLLQLIPGHGGLLRGRLAADGAESAYTECLRLCRRLLWRQSMGESLDELSEELHRAWGGQSVDFLPGELHLGSMRRMLEILSRQALPLDLast
1 -103.0002q0j_A mol:protein length:321 Quinolone signal response protein  ali model  100  1MGSSSSGLVPRGSHMLRLSAPGQLDDDLCLLGDVQVPVFLLRLGEASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDVRRRRLFCGDALGEFDEAEGVWRPLVFDDMEAYLESLERLQRLPTLLQLIPGHGGLLRGRLAADGAESAYTECLRLCRRLLWRQSMGESLDELSEELHRAWGGQSVDFLPGELHLGSMRRMLEILSRQALPLD 315
2 -57.5003adr_A mol:protein length:261 Putative uncharacterized protein ST1585  ali model follow..  18  1.................MPCRGLHSIPAGPVEFPEIATVYVMCGEKLTVMIDAGVSNSIADF--------SFLDKLDYIVLTHLHIDHIGLLPELLQV-YKAKVLVKSGFKKYLTSEDGLKKLNESAEKVLLYYVYGGLEKKLDQDKVIEVEGNEEFDLGG-YRMRLIYTPGHARHHMSVLV--DDFLFTGDSAGAYFNGVVIPTTPPVIDYKMYMESLKRQIELKPKV-VGFAHGGLVSPKIMEEHLKQMLSKEEIQINVDIGGVAGEILRKQIEVNLRGLRESKK............................ 259
3 -56.0002zo4_A mol:protein length:317 Metallo-beta-lactamase family protein  ali model follow..  21  1.....MKALLPGLYLLPVPIPYPLK---------TVNLYLLQ-GAGEVALVDTALGTRAGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGL--GARVFLHEEEFARGHR-LDHGTPEGALQGIRETVEKTRERVH-PPQNPLPLRDGEALEVAGK-RLRVLWTPGHADGHAAFYLEEEGVLLAGDALLEKVSPNVGLWAYTRNPLKDFLRSLDRLADLGAR-VAYAGHFGPIADRQRAEELKAHHQARLEALLALLD--GPKTAWELSLHLFPQELDPAGRRFAFAEAHLEYLREEGAVGRGGP.... 310
4 -55.2005i0p_A mol:protein length:366 Beta-lactamase domain protein  ali model follow..  21  20.AAGDTFEVAPGVRWLRMPLPFSLD---------HINLWLLRDGQAGWTIVDCGISSAIRTHWEQIFDRHLDGLPVLRVLVTHCHPDHFGLANWLCEGGDNVRLWMTLGEYMFGCLARHGLTDPAALDKLRSRRSYYSDLVPAVPPRYRRLREGDAVKIGAR-TWRVVTGYGHSPEHCALHSEADGVLISGDMVLPRISTNVSVFDLEPNPLALYLESLGRYETMAPDTLVLPSHGKPFRGRTRIAQLRAHHDARLEEVRVACAE-KPMSAAGIVPIMFRRELDIHQMTFALGEAHLNLLWLAGELVREHGDD.. 352
5 -49.5001jt1_A mol:protein length:263 FEZ-1, class B3 metallo-beta-lactamase  ali model follow..  13  10....................PFRIAGNLYYVGTDDLASYLIVTPR-GNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQT-KAKYMVMDEDVSVILSGGKSDFHYANDSSTY-----------TQSTVDKVLHDGERVELGG-TVLTAHLTPGHTRGCTTWTMKLKDAVIIGS-IGVNPGYKLVDNITYPKIAEDYKHSIKVLESMRCD-IFLGSHAG------MFDLKNKYVLLSKGQNNPFVDPTGCKNYIEQKANDFYTELKKQETG.......................... 263
6 -49.3001sml_A mol:protein length:269 PROTEIN (PENICILLINASE)  ali model follow..  17  17..............WLQPMAPLQIADHTWQIGTEDLTALLVQTPD-GAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRT-GAKVAANAESAVLLARGGS------------DDLHFGDGITYPPANADRIVMDGEVITVGG-IVFTAHFMAGHTPGSTAWTWTDTRNGKPVRIA-SAPGYQLQGNPRYPHLIEDYRRSFATVRALPCD-VLLTPHPGASNWDYAAG------------ARAGAKALTCKAYADAAEQKFDGQLAKETAG.......................... 267
7 -48.8003lvz_A mol:protein length:294 Blr6230 protein  ali model follow..  15  40....................PFQLIDNIYYVGTDGIAVYVIKTSQ-GLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKET-GAQLVAGERDKPLLEG------------GYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLGD-TTLTAHATPGHSPGCTSWEMTVKDGKEDREVLGTVALNRLVGQPTYAGIVDDYRATFAKAKAMKID-VLLGPHPEVYGMQAKRAEMKDGAPN-------FIKPGELVTYATSLSEDFDKQLAKQTAA.......................... 290
8 -48.6004p62_A mol:protein length:295 Metallo-beta-lactamase AIM-1  ali model follow..  15  43....................PQKVYGNTWYVGTCGISALLVTSDA-GHILVDAATPQAGPQILANIRALGFRPEDVRAIVLSHEHFDHAGSLAELQKAT-GAPVYARAPAIDTLKRGLPDRTDPQFEVAEP-----------APVANIVTLADDGVVSVGPL-ALTAVASPGHTPGGTSWTGDDCRQMVYADSLTAISDDVYRYSDDAAHPLAAFRNTLARVAALDCD-ILVTPHPSASGLWNRIG---------PRAAAPLMDTTACRRYAQGARQRLEKRLAEEAAA.......................... 295
9 -48.5005iqk_A mol:protein length:271 beta-lactamase Rm3  ali model follow..  17  10..............WNADQAPFRLFGNTYYVGMKGLSSVLVTSPQ-GHVLIDGGLPESAPKIIANIGALGFRIEDVKLILNSHGHIDHAGGLAELQRRS-NALVAASPSAALDLASGEV----------GPDDPQYHALPKYPPVKDMRLARDGGQFNVGP-VYLTAHATPGHTPGGLSWTWQSCDGMVYADSINAVSRPGFKFSSEYPNALADLRHSFETLEKLPCD-VLISAHPE------ASQLWQRLEASATGGSDAFVDPQACRAYVAAARTLLDSRLDQEKQQ.......................... 271
10 -48.2004awy_B mol:protein length:303 METALLO-BETA-LACTAMASE AIM-1  ali model follow..  14  43....................PLKVYGNTWYVGTCGISALLVTSDA-GHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKAT-GAPVYARAPAIDTLKRGLPDRTDPQFEVAEP-----------APVANIVTLADDGVVSVGPL-ALTAVASPGHTPGGTSWTGDDCRQMVYADSLTAISDDVFRYSAAHPGYLAAFRNTLARVAALDCD-ILVTPHPSASGLWNRIG---------PRAAAPLMDTTACRRYAQGARQRLEKRLAEEAATSPSSGA.................... 301
11 -47.9003vpe_A mol:protein length:262 Metallo-beta-lactamase  ali model follow..  17  5..............WSSPQQPFTIYGNTHYVGTGGISAVLLSSPQ-GHILVDGTTEKGAQVVAANIRAMGFKLSDVKYILSTHSHEDHAGGISAMQKLT-GATVLAGAANVDTLRTGVSPKSDPQFGSLSN-----------PGSAKVRAVADGELVKLGP-LAVKAHATPGHTEGGITWTWQSCEQGKCKDVV-TAVSADSYRFSDHPEVVASLRGSFEAVEKLSCD-IAIAAHPE------VNDMWTRQQRAAKEGNSAYVDNGACRAIAAAGRKRLETRLASEKR........................... 262
12 -47.9005aeb_A mol:protein length:272 LRA-12  ali model follow..  14  17..............WSKPYRPFRIAGNLYYIGTYDLACYLIT-TKQGNIIVNTGLAASALQIKNNIKALGFKLTDTKILLTTQAHYDHLGAMAEIKKIT-GAKLMADEGDATVMADGGSSDYAFGGHGSMFE-----------PIIADRLLHDKDTIQLGD-TKLVMLHHPGHTKGSCSFLFDTKDILIANM-PTIVIEKKFSEVSSYPGIAKDYAYTLQAMKNLSFD-IWVASHAS------QFSMHSKHKPGDGYNPKSFMDRKGYDESLDKLQKEYEKHLNEN............................. 272
13 -43.1001ztc_A mol:protein length:221 hypothetical protein TM0894  ali model follow..  14  29...................................STVVYLEHKD-RRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIFNS----VLFENATFYVHEVYKTKNYLSFGTIVGRIYSKVISSWKN-------------VVLLKGEESLFDEK--VKVFHTPWHAREHLSFLENAGRVLITGDITPNRLSYYDIIKGYGSVQVKNFLDRVGRID------LLVFPHDAPLKPEVKK...................................................................... 215
14 -42.3002zwr_A mol:protein length:207 Metallo-beta-lactamase superfamily protein  ali model follow..  29  1.......................MRVFPVTLGPLQENAYLVETGEGP-VLIDPG--DEPEKLLALFQTTGL---IPLAILLTHAHFDHVGAVAPLVEAL-DLPVYLHPLDLPLYEGAD-------------LAARAWGLAIPKPPLPVRPLEEGMRL-----FGFQVLHLPGHSPGHVAFYDPEGAQVFSGDLL---FRGSVGRYDLPGADPKALFASLKRLLSLPPETRVHPGHGPGTT........................................................................... 189
15 -39.2004fek_A mol:protein length:262 Putative diflavin flavoprotein A 5  ali model follow..  14  10....QVLPIATNTKVLRAR---RFEIEYALERGTTSNSYVIE--GDKTAIIDPPVESFMKIYLEALQQT-VNLKKLDYVILGHFSPNRIPTFKALLELAPQITFVCSLPAAGDLR-----------------------AAFPDDNLNILPMRGKETLDLGKGHVLKFLPIP-RWPAGLCTYDVQTQILYTDKIFGAHICGDDVFDDNWESFKEDVEAALEKISDLQ-VRLYAVGHGPLVRTS......................................................................... 238
16 -38.5004bp0_A mol:protein length:250 METALLO-B-LACTAMASE  ali model follow..  15  15....TATKIDSDVFVVT--------------DFYSSNVLVAKMLDGTVVIVSSPFENLTQTLMDWVAK--TMKPKKVVAINTHFHLDGTGGNEIYKKM--GAETWSSDLTKQLRLEENKKDRIKAAEYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSFPGPAHSPDNVVVYFPKKKLLFGGCMI------PKELGYLGDANVKAWPDSARRLKKFDAK-IVIPGHGEW-GGPEMVNKTIKVAEKAVGEMR....................................................... 249
17 -37.9004ad9_A mol:protein length:289 BETA-LACTAMASE-LIKE PROTEIN 2  ali model follow..  16  7...QRVERLSNRVVRVLGCNPGPMT--------QGTNTYLVGTGPRR-ILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKK---------------------LPRNPQREEIIGNGEQQYVYLKDGDVIK-TEGATLRVLYTPGHTDDHMALLLEEENAIFSGDCI--------GEGTTVFEDLYDYMNSLKELLKIKAD-IIYPGHGPVIHNAKIQQYISHRNIREQQILTLFRENFEKSFTVMELVKIIYKNTPENLHEMAKHNLHLKKLEKEGKIFSNTDPDKK 284
18 -37.8003aj3_A mol:protein length:274 4-pyridoxolactonase  ali model follow..  18  35...................................VYSILIEHAE-GRFLIDTGYDYDHQTIPGALGLLGLEPRDIDVVVNSHFHFDHCGGN----KYFPHAKKICHRSEVPQACNPQPFEHLSAEAAEARGATAQLLEGTTRANSTFEGIDGDVDLARG----VKLISTPGHSIGHYSLLVEFPRILFTIDAAYTQKSLETLCQAAFHIDPVAGVNSMRKVKKLAEDAELMYSH................................................................................ 252
19 -36.2005a87_A mol:protein length:248 METALLO-BETA-LACTAMASE VIM-5  ali model follow..  18  27....RLYQIADGVWSH-------IATQSFDGAVYPSNGLIVR-DGDELLLIDTAWGAKTAALLAEIEK--QIGLPVTRAVSTHFHDDRVGGVDVLRKA--GVATYASPSTRRLAEAEGN---------------------EIPTHSLEGLSSSGDAVRFGPVELFYP--GAAHSTDNLVVYVPSANVLYGGCAV--LALSRTSAGNVADADLAEWPTSVERIQKHPEAEVVIPGHGLP-GGLDLLQHTANVVTAHKNRSVA...................................................... 247
20 -36.2004f6h_A mol:protein length:236 Beta-lactamase  ali model follow..  17  8....KIEKLDEGVYVHT-------FEEVNGWGVVPKHGLVVL-VNAEAYLIDTPFTAKTEKLVTWFVER---GYKIKGSISSHFHSDSTGGIEWLNSR--SIPTYASELTNELLKKDGKVQATNSF--------------------------SGVNYWLVKNKIEVFYPGPGHTPDNVVVWLPERKILFGGGFI-----KPYGLGNLGDANIEAWPKSAKLLKSKGKAKLVVPSHSEVGDASLLKLTLEQAVKGLNESKKPSKPSNWSHPQFEK......................................... 236
21 -35.9004v0h_A mol:protein length:266 METALLO-BETA-LACTAMASE DOMAIN-CONTAINING PROT  ali model follow..  23  68...................................AEAALEEAARGP-ILVDTGGPWAREALLGALAGQGVAPGDVTLVVGTHGHSDHIGNLGLF----PGAALLVSHDFCLPGGRYLP-----------------------------HGLGEGQPLRLGPG--LEVWATPGHGGQRDVSVTALGTVVVAGDVF--ERDGDEDSWQALSEDPAAQERSRKRVLVVAD--VVVPGHGPPFR........................................................................... 236
22 -35.5003q6v_A mol:protein length:233 Beta-lactamase  ali model follow..  14  7....TLTHFKGPLYIVE--------------EYVQENSMVYI-GTDGITIIGATWTPEAETLYKEIRK--VSPLPINEVINTNYHTDRAGGNAYWKTL--GAKIVATQMTYDLQKSQWG---------SIVNFTRQGNNKYPNLEKSLPDTVFPGDFNLQNGSIRAMYLGEAHTKDGIFVYFPAERVLYGNCIL-------ENLGNMSFANRTEYPKTLEKLKGL-KVDSIIAGHDTPIHDVGLIDHYLTLLEKAPK.......................................................... 233
23 -35.4003l6n_A mol:protein length:219 metallo-beta-lactamase  ali model follow..  15  35........................................YLVTKKGVVLFDVPWEKVYQSLMDTIKK--RHNLPVVAVFATHSHDDRAGDLSFFNNK--GIKTYATAKTNEFLKKDGK-------------------------ATSTEIIKTGKPYRIGGEEFVVDFLGEGHTADNVVVWFPKYNVLDGGCLV--KSNSATDLGYIKEANVEQWPKTINKLKAKSKATLIIPGHDEWKGGGHVEHTLELLNKK............................................................. 219
24 -35.3002nze_A mol:protein length:222 Beta-lactamase II  ali model follow..  15  12....SISQLNKNVWVHTELGSFN--------GEAVPSNGLVLNTSKGLVLVDSSWDDKTKELIEMVEK--KFQKRVTDVIITHAHADHIGGIKTLKER--GIKAHSTALTAELAKKNGY-------------------------EEPLGDLQTVTNLKFGNMKVETFYPGKGHTEDNIVVWLPQYNILVGGSLV--KSTSAKDLGNVADAYVNEWSTSIENVLKRRNINAVVPGHGEVGDKGLLLHTLD.................................................................. 219
25 -35.2001znb_A mol:protein length:232 METALLO-BETA-LACTAMASE  ali model follow..  18  12....SITQLSDKVYTYV-------LAEIEGWGMVPSNGMIVI-NNHQAALLDTPINDATETLVNWVAD--SLHAKVTTFIPNHWHGDCIGGLGYLQKK--GVQSYANQMTIDLAKEKGL-------------------------PVPEHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLPTENILFGGCML--KDNQATSIGNISDADVTAWPKTLDKVKAKPSARYVVPGHGDY-GGTELIEHTKQIVNQYIESTSK...................................................... 231
26 -35.2004wd6_A mol:protein length:233 Metallo-beta-lactamase  ali model follow..  13  8....RIEKVKENIFLHT-------YSRVNGFGLVSSNGLVVI-DKGNAFIVDTPWSDRTETLVHWIRKNG---YELLGSVSTHWHEDRTAGIKWLNDQ--SISTYATTSTNHLLKENKK--------------------------EPAKYTLKGNESTLVDGLIEVFYPGGGHTIDNVVVWLPKSKILFGGCFV--RSLDSEGLGYTGEAHIDQWSRSAQNALSYSEAQIVIPGHGKIGD----IALLKHTKSLAETASNKSIQPNANASA............................................ 232
27 -35.0002p97_A mol:protein length:201 Hypothetical protein  ali model follow..  16  23..................................DFNGFAWIRPEGN-ILIDPV--ALSNHDWKHLESLG----GVVWIVLTNS--DHVRSAKEIADQT-YTKIAGPVAEKENF-----------------------------PIYCDRWLSDGDELVPG----LKVMELQGKTPGELALLLEE-TTLITGDLVRAYRAGGLEILPEKLMNKQKVVASVRRLAALEKVEAVLVGDGWSVFRDGRDR..................................................................... 192
28 -35.0001a7t_A mol:protein length:232 METALLO-BETA-LACTAMASE  ali model follow..  18  12....SITQLSDKVYTYV-------LAEIEGWGMVPSNGMIVI-NNHQAALLDTPINDATEMLVNWVTD--SLHAKVTTFIPNHWHGDCIGGLGYLQRK--GVQSYANQMTIDLAKEKGL-------------------------PVPEHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLPTENILFGGCML--KDNQTTSIGNISDADVTAWPKTLDKVKAKPSARYVVPGHGNY-GGTELIEHTKQIVNQYIESTSK...................................................... 231
29 -35.0003fcz_A mol:protein length:222 Beta-lactamase 2  ali model follow..  14  12....SISQLNKNVWVHTELGSFN--------GEAVPSSGLVLNTSKGLVLVDSSWDDKTKELIEMVEK--KFQKRVTDAIITHAHADRIGGIKTLKER--GIKAHSTALTAELAKKNGY-------------------------EEPLGDLQTVTNLKFGNMKVETFYPGKGHTEDNIVVWLPQYNILVGGCLV--KSTSAKDLGNVADAYVNEWSTSIENVSKYRNINAVVPSHGEVGDKGLLLHTLD.................................................................. 219
30 -34.9004uwo_B mol:protein length:266 METALLO-BETA-LACTAMASE VIM-26  ali model follow..  18  45....RLYQIADGVWSH-------IATQSFDGAVYPSNGLIVR-DGDELLLIDTAWGKNTAALLAEIEK--QIGLPVTRAVSTHFHDDRVGGVDVLRAA--GVATYASPSTRRLAEAEGN---------------------EIPTHSLEGLSSSGDAVRFGPVELFYP--GAAHSTDNLVVYVPSANVLYGGCAV--LELSSTSAGNVADADLAEWPTSVERIQKHPEAEVVIPGHGLPGGLDLLQHTANVVKAHKNRSVAE...................................................... 266
31 -34.5002uyx_A mol:protein length:228 BETA-LACTAMASE II  ali model follow..  14  18....SISQLNKNVWVHTELGSFN--------GEAVPSNGLVLNTSKGLVLVDSSWDDKTKELIEMVEK--KFQKRVTDVIITHAHASRIGGIKTLKER--GIKAHSTALTAELAKKNGY-------------------------EEPLGDLQTVTNLKFGNMKVETFYPGKGHTEDNIVVWLPQYNILVGGCLV--KSTSAKDLGNVADAYVNEWSTSIENVLKYRNINAVVPGHGEVGDKGLLLHTLD.................................................................. 225
32 -34.4002r2d_A mol:protein length:276 Zn-dependent hydrolases  ali model follow..  16  43...................................VSAYLIQ-CTDATVLYDTGCHPECCNLPERLRQLGLSPDDISTVVLSHLHNDHAGCV----EYFGKSRLIAHEDEFATAVRYFATG-----DHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNL-LNFGTGHASGMLGLAVRLEKFLLVSDACYTATNYGPPARRAVLHDTIGYDRTVSHIRQYSRSLTVLFGH................................................................................ 259
33 -34.4001m2x_A mol:protein length:223 class B carbapenemase BlaB-1  ali model follow..  11  3....KIEKLKDNLYVYTTYNTFN--------GTKYAANAVYLVTDKGVVVIDCPWGEDFKSFTDEIYK--KHGKKVIMNIATHSHDDRAGGLEYFGKI--GAKTYSTKMTDSILAKENK-------------------------PRAQYTFDNNKSFKVGKSEFQVYYPGKGHTADNVVVWFPKEKVLVGGCII--KSADSKDLGYIGEAYVNDWTQSVHNIQQKSGAQYVVAGHDDW-KDQRSIQHTLDLINEYQQKQKAS..................................................... 222
34 -34.2003dha_A mol:protein length:254 N-Acyl Homoserine Lactone Hydrolase  ali model follow..  20  39...................................VWCYLLE-TEEGPILVDTGMPESADRIVNILKRVGYEPDDLLYIISSHLHFDHAGGN----GAFTNTPIIVQRTEYEAALHREE-----------------YMKECILPHLNYKIIEGDYEVVPG----VQLLYTPGHSPGHQSLFIETEQVLLTIDAS--TKENFEDEVPFAGFDPELALSSIKRLKEVVKKPIIFFGH................................................................................ 239
35 -34.1002yz3_A mol:protein length:266 Metallo-beta-lactamase  ali model follow..  18  45....RLYQIADGVWS-------HIATQSFDGAVYPSNGLIVR-DGDELLLIDTAWGKNTAALLAEIEK--QIGLPVTRAVSTHFHDDRVGGVDVLRAA--GVATYASPSTRRLAEVEGN----------------------IPTHSLEGLSSSGDAVRFGPVELFYP--GAAHSTDNLVVYVPSASVLYGGCAI--YELSRTSAGNVADADLAEWPTSIERIQQHPEAQFVIPGHGLPGGLDLLKHTTNVVKAHTNRSVVE...................................................... 266
36 -34.1002ynt_B mol:protein length:233 GIM-1 PROTEIN  ali model follow..  14  8....EVIKIEDGVYLHT-------FKNIEGYGLVDSNGLVVL-DNNQAYIIDTPWSEEDTKLL--LSWATDRGYQVMASISTHSHEDRTAGIKLLNSK--SIPTYTSELTKKLLAREGKP----------------------------THYFKDDEFTLGNGLIELYYPGAGHTEDNIVAWLPKSKILFGGCLV--RSHEWEALGYVGDASISSWADSIKNIVSKYPIQMVVPGHGKVGS----SDILDHTIDLAESASNKLMQPTAEASA............................................ 232
37 -34.1002br6_A mol:protein length:252 AIIA-LIKE PROTEIN  ali model follow..  20  37...................................VWCYLLE-TEEGPILVDTGMPESADRIVNILKRVGYEPDDLLYIISSHLHFDHAGGN----GAFTNTPIIVQRTEYEAALHREE-----------------YMKECILPHLNYKIIEGDYEVVPG----VQLLYTPGHSPGHQSLFIKTEQVLLTIDAS--TKENFEDEVPFAGFDPELALSSIKRLKEVVKKPIIFFGH................................................................................ 237
38 -33.9002xf4_A mol:protein length:210 HYDROXYACYLGLUTATHIONE HYDROLASE  ali model follow..  24  1.......................MNYRIIPVTAFSQNCSLI-EQTRLAALVDPG--GDAEKIKQEVDASGV---TLMQILLTHGHLDHVGAASELAQHY-GVPVIGPEKEDEFWLQ------------GLPAQSRMFGLDECQPLTPDRWLNDGDRVSVGN-VTLQVLHCPGHTPGHVVFFDEQSQLLISGDVI---FKGGVGRSDFPRGDHTQLIDAIRKLLPLGDDVTFIPGHGPLST........................................................................... 197
39 -33.9004gyq_A mol:protein length:243 Beta-lactamase NDM-1  ali model follow..  16  23....VFRQLAPNVWQHT-------YLDMPGFGAVASNGLIVR-DGGRVLVVDTAWTDDTAQILNWIKQ--EINLPVALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLAPQEGMVAAQHSLTF-----------------AANGWVEPATAPNFGPLKVFYP--GPGHTSDNITVGIDGTDIAFGGCLI--KDSKAKSLGNLGAADTEHYAASARAFGAAPKASMIVMSHSAPDSRAAITHTAR.................................................................. 237
40 -33.9001x8h_A mol:protein length:228 Beta-lactamase  ali model follow..  20  1.AGMSLTQVSGPVYVVE--------------NYYVQENSMVYFGAKGVTVVGATWTPDARELHKLIKR--VSRKPVLEVINTNYHTDRAGGNAYWKSI--GAKVVSTRQTRDLMKSDWAEIVAFTRKGLPEYPDLPL-------VLPNVVHDGDFTLQEGK---VRAFYGPAHTPDGIFVYFPDEQVLYGGCIL------KEKLGNLSFADVKAYPQTLERLKAMKPIKTVIGGHDSPLHGPELIDHYEALIKAAPQSS........................................................ 228
41 -33.9004ubq_A mol:protein length:229 Beta-lactamase  ali model follow..  14  9....KIEKLEEGVYVHT-------FEEVNGWGVVSKHGLVVL-VNTDAYLIDTPFTATTEKLVNWFVERG---YKIKGTISSHFHSDSTGGIEWLNSQ--SIPTYASELTNELLKKDGKVQAKNSF--------------------------SGVSYWLVKNKIEVFYPGPGHTQDNVVVWLPEKKILFGGCFV-----KPDGLGNLGDANLEAWPKSAKILMSKVKAKLVVSSHSEI-GDASLLKRTWEQAVKGLNESKKPSQPSN................................................ 229
42 -33.8001qh3_A mol:protein length:260 PROTEIN (HYDROXYACYLGLUTATHIONE HYDROLASE)  ali model follow..  18  14.....................................MYLVIDDETKAAIVDPV---QPQKVVDAARKHGV---KLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDRIGALT---------------------------------HKITHLSTLQVGS-LNVKCLATPCHTSGHICYFGSEPPAVFTGDTL--FVAGCGKFYEGTADEMCKALL--EVLGRLPPDTRVYCGHEYTINNLKFARHVEPGNAAIREKLAWAKEKYSIGEAEEFTYNPFMRVREKTVQQHAGETDPVTTMRAVRREKDQFKMPRD 260
43 -33.8002ohh_A mol:protein length:404 Type A flavoprotein fprA  ali model follow..  14  4....AAKRISDGVYWTGVLDWDLRNYHGYTLQGTTYNAYLVC-GDEGVALIDNSYPGTFDELMARVEDAQVGMERVDYIIQNHVEKDHSGVLVELHRRFPEAPIYCTEVAVKGLLK----------------------HYPSLREAEFMTVKTGDVLDLGGK-TLTFLETP-HWPDSMFTLLDEDGILFSNDAFGQHLCCPQRLDREIPEYVLKKFDEVKELGLLERIQMIAPSHGQIWTDPMKIIEAYTGWATGMVDERVTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVYCLHEDDRSEIVKDILESG.... 309
44 -33.8003spu_A mol:protein length:265 Beta-lactamase NDM-1  ali model follow..  17  24....VFRQLAPNVWQHT-------YLDMPGFGAVASNGLIVR-DGGRVLVVDTAWTDDTAQILNWIKQ--EINLPVALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLAPQEGMVAAQHSLTF-----------------AANGWVEPATAPNFGP---LKVFYGPGHTSDNITVGIDGTDIAFGGCLI--KDSKAKSLGNLGDADTEHYAASARAFGAAPKASMIVMSHSAPDSRAAI-----THTARMADKLRKLVPRGSAAAALE.......................................... 257
45 -33.8001xm8_A mol:protein length:254 glyoxalase II  ali model follow..  22  14.....................................AYILHDEDTGVGVVDPS---EAEPIIDSLKRSGR---NLTYILNTHHHYDHTGGNLELKDRY-GAKVIGSAMDKDRI------------------------------PGIDMALKDGDKWMFAG-HEVHVMDTPGHTKGHISLYFPGSRAIFTGDTMFSL---------LFEGTPKQMLASLQKITSLPDDTSIYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPT........................................... 206
46 -33.7004rl2_A mol:protein length:246 Beta-lactamase NDM-1  ali model follow..  16  26....VFRQLAPNVWQHT-------YLDMPGFGAVASNGLIVR-DGGRVLVVDTAWTDDTAQILNWIKQ--EINLPVALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLAPQEGMVAAQHSLTF-----------------AANGWVEPATAPNFGPLKVFYP--GPGHTSDNITVGIDGTDIAFGGCLI--KDSKAKSLGNLGDADTEHYAASARAFGAAPKASMIVMSHSAPDSRAAITHTAR.................................................................. 240
47 -33.7002y87_A mol:protein length:265 METALLO-B-LACTAMASE  ali model follow..  18  44....RLYKIGDGVWSHIATQKLG--------DTVYSSNGLIVRDADELLLIDTAWGKNTVALLAEIEK--QIGLPVTRSISTHFHDDRVGGVDVLRAA--GVATYTSPLTRQLAEAAGNEVPAHSLK---------------------ALSSSGDVVRFGP---VEVFYGAAHSGDNLVVYVPAVRVLFGGCAV--HEASRESAGNVADANLAEWPATIKRIQQRPEAEVVIPGHGLP-GGLELLQHTTNVVKTHKVRPVA...................................................... 264
48 -33.6003rkk_A mol:protein length:237 Beta-lactamase NDM-1  ali model follow..  16  17....VFRQLAPNVWQHT-------YLDMPGFGAVASNGLIVR-DGGRVLVVDTAWTDDTAQILNWIKQ--EINLPVALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLAPQEGMVAAQHSLTF-----------------AANGWVEPATAPNFGPLKVFYP--GPGHTSDNITVGIDGTDIAFGGCLI--KDSKAKSLGNLGDADTEHYAASARAFGAAPKASMIVMSHSAPDSRAAITHTAR.................................................................. 231
49 -33.4005a5z_A mol:protein length:251 BETA-LACTAMASE NDM-1  ali model follow..  17  23....VFRQLAPNVWQHT-------YLDMPGFGAVASNGLIVR-DGGRVLVVDTAWTDDTAQILNWIKQ--EINLPVALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLAPQEGMVAAQHSLTF-----------------AANGWVEPATAPNFGP---LKVFYGPGHTSDNITVGIDGTDIAFGGCLI--KDSKAKSLGNLGDADTEHYAASARAFGAAPKASMIVMSHSAPDSRAAITHTAR.................................................................. 237
50 -33.3004tyf_A mol:protein length:231 NDM-4  ali model follow..  16  11....VFRQLAPNVWQHT-------YLDMPGFGAVASNGLIVR-DGGRVLVVDTAWTDDTAQILNWIKQ--EINLPVALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLAPQEGLVAAQHSLTF-----------------AANGWVEPATAPNFGPLKVFYP--GPGHTSDNITVGIDGTDIAFGGCLI--KDSKAKSLGNLGDADTEHYAASARAFGAAPKASMIVMSHSAPDSRAAITHTAR.................................................................. 225
51 -32.8002q9u_A mol:protein length:414 A-type flavoprotein  ali model follow..  11  9....QDQEMIPGVYWVIVDWMVRIFHGYHTDEGSSYNSYFID--DECPTVIDSVKYPFAEEWLSRIAAC-CPLDKIKYVVMNHAEGDHASSLKDHYHKFTNATFVCTKKCQEHLK-----------------------ILYGMEKATWLIVDDKYTLKIGKR-TLKFIPVP-HWPDSTFTYCPEDKILFSNDGFGQHYATSRRWADECDVS-AQMRKALEVASTVE-IKYILSAHGVSWRGDAMGLAIAEYDRWSKGQHCQTVVLDSMYGTTHRMALALLDGARSTGCETVLLEMTSSDITKVALHTYDSG.... 309
52 -32.7005acp_A mol:protein length:250 GIM-1 PROTEIN  ali model follow..  14  25....EVIKIEDGVYLHT-------FKNIEGYGLVDSNGLVVL-DNNQAYIIDTPWSEEDTKLL--LSWATDRGYQVMASISTHSHEDRTAGIKLLNSK--SIPTYTSELTKKLLAREGKPVPTHYF--------------------------KDDEFTLGNGLIELYYPGAGHTEDNIVAWLPKSKILFGGCLV--RSHEREGLGYVGDASISSWADSIKNIVSKYPIQMVVPGHGKVGS----SDILDHTIDLAESASNKLMQPTAEASA............................................ 249
53 -32.3004exs_B mol:protein length:272 Beta-lactamase NDM-1  ali model follow..  17  50....VFRQLAPNVWQHT-------YLDMPGFGAVASNGLIVR-DGGRVLVVDTAWTDDTAQILNWIKQ--EINLPVALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLAPQEGMVAAQHSLTF-----------------AANGWVEPATAPNFGP---LKVFYGPGHTSDNITVGIDGTDIAFGGCLI--KDSKAKSLGNLGDADTEHYAASARAFGAAPKASMIVMSHSAPDSRAAITHTAR.................................................................. 264
54 -32.0001e5d_A mol:protein length:402 RUBREDOXIN:OXYGEN OXIDOREDUCTASE  ali model follow..  16  2....QATKIIDGFHLVGAI---DFHGYTLSPMGTTYNAYLVE--DEKTTLFDTVKAEYKGELLCGIASV-IDPKKIDYLVIQHLELDHAGALPALIEACQPEKIFTSSLGQKAME-----------------------SHFHYKDWPVQVVKHGETLSLGKR-TVTFYETR-HWPDSMVSWFADEKVLISNDIFGQNIAASERFSDQIPVHTPQTLKAIETLVGAGAPEFICPDHGVIFRGADQCTFAVQKYVEYAEQKPTVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCKACHHSQIMSEISDAG.... 305
55 -31.8004chl_A mol:protein length:238 PERSULFIDE DIOXYGENASE ETHE1, MITOCHONDRIAL  ali model follow..  19  21.....................................TYLLGDRESREAVLIDPVLETAPRDAQLIKELGL---RLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQAD---------------------------------LHIEDGDSIRFGR-FALETRASPGHTPGCVTFVLNDHSMAFTGDALLIRGCGRTDF---QQGCAKTLYHSVEKIFTLPGDCLIYPAHSTVEEERTLNPRLTLSCEEFVKIMGNL..................................................... 213
56 -31.7003esh_A mol:protein length:280 Protein similar to metal-dependent hydrolase  ali model follow..  14  3IGDISIHYLNGGNTKM--VVPKPLWSKQYNANERNTHPILIQTAQ-YNLIIDAGIGNEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSN-----------KLILFEKHFEPVPG----IKMQHSGGHSFGHTIIESQGDKAVHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKERMYFIQQQYWFLFYH................................................................................ 251
57 -31.6004d02_A mol:protein length:479 ANAEROBIC NITRIC OXIDE REDUCTASE FLAVORUBREDO  ali model follow..  14  2.....SIVVKNNIHWV-----GQRDWEVRDFHGSSYNSYLIR--EEKNVLIDTVDHKFSREFVQNLRNE-IDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYCTANAIDSINGPE----------------------------NFNVVKTGDTLDIGNGKQLIFVETP-HWPDSMMTYLTGDAVLFSNDAFGQHYCDEHLFNDEVDQT-RLVTPKITEILGFNPVDMIATSHGVVWRDNPTQ-ELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGIAETRVAVKIFNVARSDKNEILTNVFRSK.... 302
58 -31.4002qed_A mol:protein length:258 Hydroxyacylglutathione hydrolase  ali model follow..  17  21.....................................IWVLTNDEGRCVIVDPG---EAAPVLKAIAEHKW---MPEAIFLT----DHVGGVKELLQHFPQMTVYGPAETQ---------------------------------KGATHLVGDGDTIRVLG-EKFTLFATPGHTLGHVCYFSRP--YLFCGDTL------SGGCGRLFEGTPSQMYQSLMKINSLPDDTLICCAHEYTLANIKFALSILPHDSFINEYYRKVKELRVKKQKNERKINLFLRTEDIDLINEINKETILQQPEARFAWLRS...... 249
59 -30.9001ycf_A mol:protein length:398 Nitric oxide reductase  ali model follow..  17  1...SQPVAITDGIYWV-----GAVDWNIRYFHGTTYNAYLIV--DDKTALVDTVYEPFKEELIAKLKQI-KDPVKLDYLVVNHTESDHAGAFPAIMELCPDAHVLCTQRAFDSLK-----------------------AHYSHIDFNYTIVKTGTSVSLGKR-SLTFIEAP-HWPDSMFTYVPEEALLLPNDAFGQHIATSVRFDDQVDAGLNLITKKLDEIQKINAIKTIAPSHGIIWRKDPGR-EAYARWAEGQGKAKAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLSVSDRNDVIKEILDAR.... 304
60 -30.9004zo2_A mol:protein length:294 Acylhomoserine lactonase  ali model follow..  12  11LGELELFILTDGYIHEENLISFAPRGNVAELKTMAINILLVKTKEK-LILMDTGMGERTGFLLKSLQKAGFSAHDITDIFLSHAHPDHIGGV---KLVFPNASIFISKIEHDFWINASIKDFNNSALKAHPERLNQIQNILKAIQPKLKFYDLNKTLYSH----FNFQLAPGHTPGLTVTTSGNEKLMYVADLIHSDVILFPHPDWGFSGDTDLDIATASRKKFLKTKARAFTSH................................................................................ 269
61 -30.5004xuk_A mol:protein length:291 Putative hydrolase  ali model follow..  15  11AGDVQITALLDGTNFMSPNLFKDIPQQ-----QTSINAFLVNIGKS-LILIDSGAASHLGSVLSNLKASGYQPEQVDTILLTHLHPDHVCGI---VANFPNATVYVSNDEASFWLDPKQAAKLPKEKQANYLGTVEKIKQAIAPKQRFKTYKLGDDIQ------FKVINTAGHTPGHFSYELKTESIVFIGDIVHSHTVQFDRPETAIEYDIDPKKAVETRLKQFANFATIAAPH................................................................................ 265
62 -29.2002gcu_A mol:protein length:245 Putative hydroxyacylglutathione hydrolase 3  ali model follow..  16  17.....................................TYLLADPDKPALLIDP-VDKTVDRDLKLIDELGL---KLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKASGSKAD---------------------------------LFLEPGDKVSIGD-IYLEVRATPGHTAGCVTYVQPQPRMAFTGDAVLIRGCGRTDF---QEGSSDQLYESVSQIFTLPKDTLIYPAHSTVGEEMQHNPRLTKDKETFKTIMSNL..................................................... 217
63 -29.2001vme_A mol:protein length:410 Flavoprotein  ali model follow..  17  13....ERIFDDPEIYVLRID---YFEAVWEIPEGISYNAYLVKL-NGANVLIDGWKGNYAKEFIDALSKI-VDPKEITHIIVNHTEPDHSGSLPATLKTIHDVEIIASNFGKRLLEG--------------------------YGIKDVTVVKDGEEREIGGK-KFKFVMTP-HWPDTMVTYL--DGILFSCDVGGGYLLPEILDDSNESV--NYILEGAEKLSSLK-IKALLPGHGLIWKKDRLLNHYVSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSDEERPAISEILKD...... 310
64 -28.9004ysb_A mol:protein length:233 Metallo-beta-lactamase family protein  ali model follow..  21  15.....................................TYLIGDEATRQAVLIDPVLEQVDRDLQMVAELDL---TLTHVFDTHVHADHITASGALRERTQATVVGSVNGASCA----------------------------------NVQVRHGDEVRVGQ-LVFQVLATPGHTDDSISYL---GDRVFTGDALLVRGNGRTDF---QNGNASQLYDSLRVLFTLPDETLVYPGH................................................................................ 170
65 -28.7004o98_A mol:protein length:337 organophosphorus hydrolase  ali model follow..  18  42LGDFEVTALYDGYVDLPASLLKGIDDK-----QTAVNAYLINTGDN-LVLIDTGAAQTLGVVQTNLKASGYQPEQVDTVLLTHLHPDHACGL---SPAYPNATVEVPQAEAEFWLDEATMAKAPEGMQGMFKMARQAVAPYA-KMNKLKPYKTEGELLPG----VSLVASSGHTPGHTSYLSGGQSLLVWGDILINHAVQFAKPEVVWEFDVDSDQARQSRQRILAEAAWVAGAH................................................................................ 294
66 -28.7004le6_A mol:protein length:324 Organophosphorus hydrolase  ali model follow..  18  42LGDFEVTALYDGYVDLPASLLKGIDDK-----QTAVNAYLINTGDN-LVLIDTGAAQTLGVVQTNLKASGYQPEQVDTVLLTHLHPDHACGL---SPAYPNATVEVPQAEAEFWLDEATMAKAPEGMQGMFKMAQQAVAPYA-KMNKLKPYKTEGELLPG----VSLVASPGHTPGHTSYLSGGQSLLVWGDILLNHAVQFAKPEVVFEFDVDSDQARQSRQRILAEAAWVAGAH................................................................................ 294
67 -28.5001p9e_A mol:protein length:331 Methyl Parathion Hydrolase  ali model follow..  17  52LGDFEITALSDGTVALPVDKRLNQPAP-----ETSVTGYLVNTGSK-LVLVDTGAAGTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGL---QLAFPNAVVRADQKEADFWLSQTNLDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLVPG----IKALASHGHTPGHTTYVSQGQKLALLGDLILVAAVQFDDPSVTTQLDSDSKSVAVERKKAFADAALIAASH................................................................................ 302
68 -28.4002p18_A mol:protein length:311 Glyoxalase II  ali model follow..  14  36.....................................SYLINDHTTHLAAVDV--NADYKPILTYIEEHLKQQGTFSTILSTHKHWDHSGGNAKLKAELEAMNSTVP---------------------------VVVGGANDSIPAVTKPVREGDRVQVGD-LSVEVIDAPCHTRGHVLYKVQHPQALFTGDTM--FIAGIGAFFEGDEKDMCRAMEKVGNDYALDKVTFIFPGHEYTSGFMTFSEKTFAFIQAQRAKYAAAVKTGDPSVPSSLAEEKRQNLFLRVADPAFVAKMNQGNAHALMMYLYN...... 302
69 -24.0003tp9_A mol:protein length:474 BETA-LACTAMASE and RHODANESE DOMAIN PROTEIN  ali model follow..  20  18.....................................SYLV-QETGEACVIDP-----ARDVEPYLLTAKREGLRIVAALETHIHADFVSGAREMADR-AGAAICVSDEGPPEWKSEYVKAY------------------------PHRLLKDGDELHFGN-VRIVVMHTPGHTPEHVSYLLYDGKALFSGDFVFVLLERVAGESGSSEALARQMFRSLRKFEALPDHVQVLPAHGAGSACGKALGAVPSSTVGYEKLVNWALQHKDEDAFVQALLA...................................... 241
70 -23.7003r2u_A mol:protein length:466 Metallo-beta-lactamase family protein  ali model follow..  13  33.....................................SYLI-QKTGEAMIIDP-----IRDLSSYIRVADEEGLTITHAAETHIHADFASGIRDVAIKL-NANIYVSGESDDTLG-------------------------YKNMPNHTHFVQHNDDIYVGN-IKLKVLHTPGHTPESISFLLTDEGGLFSGDFIFVLLEKAVKVEGSSEIGAKQMFKSIESIKDLPDYIQIWPGHGAGSPCGKSLGAIPTSTLGYEKQTNWAFSENNEATFIDKLISDQPAHHFAQMKKINQFGMNLYQPYTVYPATNTNRLTFD 295
71 -22.6004ysk_A mol:protein length:294 Beta-lactamase domain protein  ali model follow..  17  1.................MIIGNNLHVDAFYDEATSTISYLVMDETRQCALIDSVLSASADRLVERVNELNA---SVRWVLETHVHADHLSAAAYLKEKLGGHTAIGAH--------------ITQVQKVFGALFNAEPGFARDGSQFDVLLEDEEGFRIGN-LQARALHTPGHTPACMSFMDAGEIAVFVGDTLFMPDYGTARC-DFPGADARTLYRSIRRLLAFPDQTRLFMCH................................................................................ 212
72 -22.0004efz_A mol:protein length:298 Metallo-beta-lactamase family protein  ali model follow..  21  19.....................................SYLLFDGSGECALIDSVLTASADQLIARVAALGA---RVRWLLETHVHADHLSAAPYLKTRVGGEIAIGRH--------------VTRVQDVFGKLFNAGPAFAHDGSQFDRLLDDGDTLALGA-LSIRAMHTPGHTPACMTYVDARDAAAFVGDTLFMPDYGTARC-DFPGGDARSLYRSIRKVLSLPPATRLYMCH................................................................................ 216
73 -18.7002p4z_A mol:protein length:284 Metal-dependent hydrolases of the beta-lactam  ali model follow..  13  27....................................GLSLLLKKGNKEIVVDTGQS---ENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERNPEVKIYTHKEDLSFYEKYKNNFVLIDKDAEIEEGFYVITNTDITYDNEFTKFLDEVFVVVKEEDGINVVTGCSHA---ILNILETARNRFGVSYIKSLIGGFHLRGM----EEEKVKDIARKIEEYGVK-KVLTGH----TGIDEYGFLKSVLKDKISYL........................................................ 270
74 -17.0002ycb_A mol:protein length:636 CLEAVAGE AND POLYADENYLATION SPECIFICITY FACT  ali model follow..  16  165LGNRIHQKPKYDNDWARLTA-------MGGFREVGRSCLYLQTPNSR-VLLDCGVGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMT---LQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNA-GHILGSAMAHDGQHNMVYTGD---------------FKYEQSRLLEAAANRFPRIETLVMESTYGG--SRNRAEKELVKTIYSTLRRGGKILIPVFAVGRAQELMIVLEEYIRTGIIDEVP--VYIDGMIWEANAIHTA..... 457
75 -16.5002xr1_A mol:protein length:640 CLEAVAGE AND POLYADENYLATION SPECIFICITY FACT  ali model follow..  15  169VGRKIHRECTSKDQWVRVTALGGCKEVGR-------SCFLLSTPESR-ILIDCGVNVGSDENMTPYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKYGYEGPVYCTPPTRDLMV---LQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNA-GHAISHFHIGDGLHNVVFTGDY--------KYEKTRLFDPAVNKFPRVETV-------ISEATYGN--ALKDAEKHLQMVVKNTIERGGIAVIPAFAVGRSQEVMIVLEESIRKGLIPEVP--VYLDGMIWEATAIHAT..... 460
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.