FFAS03 results for 3lvzA

Query: 3lvz_A mol:protein length:294 Blr6230 protein, from PDB0516

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290`
#	Score	Template	Links and tools	%id	First	`MRRLTAALCALTLLSTGAQAQTIKDFLAVAMKKWTAPFEPFQLIDNIYYVGTDGIAVYVIKTSQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKETGAQLVAGERDKPLLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAHATPGHSPGCTSWEMTVKDGKEDREVLFFCSGTVALNRLVGQPTYAGIVDDYRATFAKAKAMKIDVLLGPHPEVYGMQAKRAEMKDGAPNPFIKPGELVTYATSLSEDFDKQLAKQTAALEKK`	Last
1	-7.760	`VFG001354(gi:15900810) (pce) choline binding protein E [CBPs (VF0145)] [Streptococcus pneumoniae TIGR4]`	`ali follow..`	11	1	`MKKKLTSLALVGAFLGLSWYGNVQAQESSG--------------NKIHFINVQEGGSIILESNGHFAMVDTGEDVLTDRVFRRLKELGV--QKLDFILVTHTHSDHIGNVDELLSTYPVDRVYLKKSERLWDNLYGYDKVLQTAAEKGVSVIQNITQGDAHFQFGDMDIQLYNY--DSSGELKKIWDDNSNSLISVVKVNGKKIYLGGDLDNVHGAEDKYGPLIGKVDLMKF..............................................................`	251
2	-5.280	`VFG000073(gi:16802247) (plcA) phosphatidylinositol-specific phospholipase c [PlcA (VF0063)] [Listeria monocytogenes EGD-e]`	`ali follow..`	11	6	`LQRTLVLLLCFILYFFTFPLGGKAIKNSVTTKQWMSALPDTTNLAALSIPGTHDTMSY--NGDITWTLTKPLAQTQTMSLYQQLEA-GIRYIDIRALNIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLTTPRTDTSNKIPTLKDVRGKILLLSENHTKKPLVINSRKFG------MQFGAPNQVIQDDYNGPSVKTKFKEIVQTAYQASKADNKLFLN-----------HISATSLTFTP-------RQYAAALNNKVEQFVLNLTSEKVRG`	293
3	-5.250	`VFG000701(gi:30962649) (bsc2) polysaccharide biosynthesis protein Bsc2 [Capsule (VF0043)] [Haemophilus influenzae str. 1007]`	`ali follow..`	10	69	`..........................................................LDALKEGVIFYPFNAQSNCRAV---------ANRNLTHIFITHGESNKITSVKPIVRIYDHVITAGNAGIDRLIAHK--------------------IFSQYDVEAGRIIPMGDTFIGKT--------GLDHTGKGIPAIFYVPTWEGGIEQENYSSLSYVGQVTNTLLLLSKH-INEIVIRPHPNTGHRLQNYHQFLMDIVKTLLHKG...........................`	241
4	-5.160	`VFG045590(gi:52842834) (lpg2628) Dot/Icm type IV secretion system effector [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]`	`ali follow..`	10	40	`....VMLFVVLIVLLAMSTGWLPSYLTYQLESRYPIVKRVNPNVKWVVVLGGGQNGVRLFRTLPDAKLLLSG-QSEALLLTELAKWFAIDSEKVPFYLVTSAI--HMPRSMALCQQQGLHPIAAPTD.......................................................................................................................................................................`	209
5	-4.990	`VFG001954(gi:15792744) (Cj1426c) methyltransferase family protein [Capsule (VF0323)] [Campylobacter jejuni subsp. jejuni NCTC 11168]`	`ali follow..`	11	103	`..............................................................GYRPVCIDCGG--------------------------------HAGLITDIILHCGGQSYIFEPNIYLNY------------------FLRKKYENNINVKLFQKAV------SDRNYETDFIMFGNRILSQGNRIVESVQDSQTEKTYKVQVID-IENEILTQHKRIYFLKLDI----EGMEFEIMKKIIEKKIYKKIDYIACETHEYMFDDSEKKIGELKQ.........`	268
6	-4.870	`VFG013342(gi:30995400) (lpsA) glycosyltransferase [LOS (CVF494)] [Haemophilus influenzae Rd KW20]`	`ali follow..`	10	13	`.......................................PTFYLFGLLIMHNAAQHNYVISLTTE--------QKRRKHITEEFGKQNIPFEFFDAI-LSDGELSHIVLWDLALENNLNYINIFEDDIHLGENAKE-------------LEIDYISDDIHVLKLEANGKMFFKQPKSVKCDRNVYPMTVKQSGCAGYTVT----------------AKGAKYLLELVKNKPDVAVDSLV------FEDFLHFKDYKIVQLSPGI----VQDFVLHPDNPFESSLQEGRDRVHGN`	249
7	-4.860	`VFG013321(gi:16272676) (lpxH) UDP-2,3-diacylglucosamine pyrophosphohydrolase [LOS (CVF494)] [Haemophilus influenzae Rd KW20]`	`ali follow..`	13	36	`.......................................................RLYILGDLFDFWIGDDEQSALIQQVKDLIKFVSDQGVQCYFQ---HGNRDFLIG-ERFSKETGAQLLPDYQLITLYDKK-------------------ILLCHGDTLCIDDEAYQQFRRRVHQKWLQRLFLCLPLKVRVIIAEKIRAKSNQDKQAKSQEIMDVNQAFTAEKVQE----GVNLLIHGHTHREAIHQQEEFTR......................................`	210
8	-4.790	`VFG000078(gi:16804596) (ami) autolysin amidase, adhesin [Ami (VF0071)] [Listeria monocytogenes EGD-e]`	`ali follow..`	11	1	`MKKLVKSAVVFASLVFIGTSATMITEKASAASI-QKVDGQATYIPKGVRDGTATEEHDGFEDGTNSVLQQVPLLRGYPDVNAYIKSNKFSTAKIEKQLKSQ-KFNYRNGYGKPE------IVIHETANN---SSTITGEINYMSTNYNNAFVHAFVDKSRIIQIHPTENGVWGA-GQYANARFIQVELVRS--------------------------KTFDEFARSINNYAYYAAYLL........................................................`	209
9	-4.770	`VFG007031(gi:28901169) (tdh) thermostable direct hemolysin A [TDH (VF0517)] [Vibrio parahaemolyticus RIMD 2210633]`	`ali follow..`	8	15	`..............................................................................SMLAAFKTFAFELPSVPF---APGSDEILFVVRDTTFNTNAPVNVEVSDFWTNRNVKRKPYKDVYGQSVFTTSGTKWLTSYMTVNINDKDYTMAAVSGYKHGHSAVFVKSDQVQLQHSYDSVANFVGEDEDSIPSKMYLDETPEYFVNVEAYESGSGNILV.......................................................`	173
10	-4.760	`VFG000878(gi:26251207) (fimG) FimG protein precursor [Type 1 fimbriae (VF0221)] [Escherichia coli CFT073]`	`ali follow..`	12	1	`MKWRKRGYLLAAMLAFASATIQAAD-------------------VTITVNGKVVAKPCTVSTTNATVLMSAGAASAWHDVALELTNCPVGTSRVT--ASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFP--RALTVNGGATQGTIQAVISITYTYS....................................................................................................................`	167

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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