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Query: 5YXK Entity 1(prereleased), from PDB1018

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst SMLKIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGMIRIHQMNSELSVLALast
1 -28.500IDP06410 K14 [Human herpesvirus 8] YP_001129432 [Human herpesvirus 8]  ali follow..  20  23GGARVQGPMRGSAALTCAITPRADI----VSVTWQKRQPGPVNVATYSHSYGVVVQTQYRHKANITCPGLTLVIHNLAVDDEGCYLCIFNSFGGRQVS----CTACLEVTS 129
2 -26.900IDP90144 bifunctional IL-1-beta-inhibitor/prevents febrile response in VAC-mouse intranasal model [Monkeypox virus] MPXV_ZAI1979_005_189.5 [Monkeypox virus]  ali follow..  26LPEGVVTSIGSNLTITCRVSLRLPTTDADVFWI---SNGMYYEEEDEDGDGRISVANKIYMTDKRRVITSWLNINPVKEEDATTFTCMAFTIPSISK------TVTVSIT. 126
3 -26.400IDP90189 gene: CPXV175 CDS; CPXV175 protein AAM13616.1 [Cowpox virus (Brighton Red)]  ali follow..  16  20TKTIEYTACNDTIIIPCTIDN------PTKYIRWKL-DNHDILTY----NKTSKTTILSKWHTSARDSDVSLIMEYKDILP-GTYTCEDNTGI--------KSTVKLVQRH 115
4 -22.700IDP91754 TVB1_HUMAN [Homo sapiens]  ali follow..  15  26SPRHEVTEMGQEVTLRCKPISGHN----SLFWYRQTMMRGLELLIYFNNNVPIDDSGMPEDRFSAKMPNSTLKIQPSEPRDSAVYFCASSLA................... 116
5 -20.500IDP90143 bifunctional IL-1-beta-inhibitor/prevents febrile response in VAC-mouse intranasal model [Monkeypox virus] MPXV_ZAI1979_005_189 [Monkeypox virus]  ali follow..  19  32YFASFMELENEPVILPCPQINTLSSGYNILDILWEKRGADN-------------------DRIIQIDNGSNMLILNPTQSDSGIYICITTNETYCDMM-----SLNLTIVS 118
6 -20.400IDP90198 gene: CPXV209; CPXV209 protein AAM13648.1 [Cowpox virus (Brighton Red)]  ali follow..  226LPDGVVTSIGSNLTIACRVSLRPPTTDADV--FWISNGMYYEEDDEDGDGRISVANKIYTTDKRRVITS-RLKINPVKEEDATTFTCMAFTIPSIS------KTVTISIT. 326
7 -20.000IDP90177 gene: CPXV024 CDS; CPXV024 protein AAM13471.1 [Cowpox virus (Brighton Red)]  ali follow..  26...PNLDIVTSSGEFHCSGCVEHMPDFSYMYWLAKDMKSDEATKFIEHGDGIKEDETVRTTDGGITTLRKVLHVTDTNKFAHYRFTCVLTTIDGVSKKNIWL......... 125
8 -19.400IDP90133 CD47-like putative membrane protein [Monkeypox virus] MPXV_ZAI1979_005_159 [Monkeypox virus]  ali follow..  15  20TKTIEYTACNDTIIIPCIIDN------PTKYIRW-KLDNHDILTY----NKTSKTTILSKWHTSLSDSDVSLIMEYKD-ILPGTYTCGDNTGI--------KSTVKLVQRH 115
9 -18.800IDP90109 interleukin-18-binding protein [Monkeypox virus] MPXV_ZAI1979_005_014 [Monkeypox virus]  ali follow..  12  26...PNLAIVTSSGEFHCSGCVERMPGFSYMYWLANDMEDTKFIEHLGDGIKEDETVRTTDGGITTL--RKVLHVTDTNKFAHYRFTCVLITLDGVSKKNIWL......... 125
10 -17.600IDP90145 IFN-alpha/beta-receptor-like secreted glycoprotein [Monkeypox virus] MPXV_ZAI1979_005_192 [Monkeypox virus]  ali follow..  16  157KTYELGTYDKYGIDLYCGILYAKHYN----NITWYKDNKEI------------------IDDFKYSQAGKELIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRC...... 240
11 -16.900IDP05773 soluble interferon-alpha/beta receptor [Ectromelia virus] AAX23681 [Ectromelia virus]  ali follow..  16  163ETYELGTHDKYGIDLYCGILYAKH----YNNITWYKNNQELI-----------------IDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCK..... 247
12 -12.300IDP06418 gene: K1; K1 [Human herpesvirus 8] YP_001129350 [Human herpesvirus 8]  ali follow..  10  101GQPSNTVTCGQHVTLYCSTSGNNV-------TVWHLP-----------------------NGQNETVSQTKYYNFTLMNQTEGCYACSNGLSSRLSN------RLCFSARC 175
13 -10.000IDP90211 gene: m128L; m128L MYXV_gp132 [Myxoma virus (strain Lausanne)]  ali follow..  13  25......TVCNKTVTLECNLDALIYKDINSVHVKWLFDTMYDTIS----------------------TNGSSITFDFANNL-TGNYTCEAYSEFNSVKHVIALT........ 100

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.