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Query: 3ial_A mol:protein length:518 Prolyl-tRNA synthetase, from PDB1018

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAMGGDVTFSLTKTRDTFADWFDAIMDAAELVDRRYPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIKGFEAECFWVEKGGLQPLEERLALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNTKPLIRVREIHWNEAHCCHATAEDAVSQLSDYWKVIDTIFSDELCFKGQKLRRVCWDRFPGADYSEVSDVVMPCGRVLQTAGIHNLGQRFSSTFDILYANKANESVHPYLTCAGISTRVLACALSIHGDSGGLVLPPLIAPIHVVIIPIGCGKKNNQESDQQVLGKVNEIADTLKSKLGLRVSIDDDFSKSMGDKLYYYELKGVPLRIEVGQRDLANGQCIVVPRDVGKDQKRVIPITEVMKVSSHTTENHELVVKNVIKDELDAYKARLKEKAFAFHNSMVTNCKSFDEIVACIENKGGLARFPFYTTEADGEVWDKKLKDACSAEIRGHNPDENVLPGEVCALSGKPAVCYMYCAKSYLast
1 -95.200sp|P07814|SYEP_HUMAN Bifunctional aminoacyl-tRNA synthetase OS=Homo sapiens GN=EPRS PE=1 SV=5 (Range: 1051-1350)  ali follow..  32  1.............................................PWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTELAEPIAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHSAFATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGDYTTTIEAFIASGRAIQGGTSHHLGQNFSKMFEIVFEDPKIPGEFAYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDKEALIAKCNDYRRRL-LSVNIRVRADLRDNYS......................................................................................................................................................................... 300
2 -88.800sp|Q7L3T8|SYPM_HUMAN Probable prolyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=PARS2 PE=1 SV=1  ali follow..  19  49QNLREDRVLSLQDKSDDLTCKSQRLMLQVGLI--YPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAEL-WQATNRWDLMGKELLRLR----DRHGKEYCLGPTHEEAITALIASQKLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLGLPFVKVQADVGETLDLSQMNCPACQGPLTKTKGIEVGHTFYLGTKYSSIFNAQFTNVCGKPTLAEMGCYGLGTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKE--QAASELIGQLYDHITEAVPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALEDAHFEVWCQNTGEVAF--LTKDGVMDLLTPVQT............................................................................................................... 474
3 -70.000sp|P07814|SYEP_HUMAN Bifunctional aminoacyl-tRNA synthetase OS=Homo sapiens GN=EPRS PE=1 SV=5 (Range: 901-1200)  ali follow..  31  108.PKKQTRLGLEAKKEENLADWYSQVITKSEMIEY-HDISGCYILRPWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTELAEPIAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHSAFATMEEAAEEVLQILDLYAQVYEEL............................................................................................................................................................................................................................................................................................................................. 300
4 -67.500sp|P07814|SYEP_HUMAN Bifunctional aminoacyl-tRNA synthetase OS=Homo sapiens GN=EPRS PE=1 SV=5 (Range: 1201-1500)  ali follow..  24  1...................................................................................................................................................................................................LAIPVVKGRKTEKEKFAGGDYTTTIEAISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKIPGEKQFANSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDKEALIAKCNDYRRRL-LSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVRRDTGEKLTVAEN-----------------EAETKLQAILEDIQVTLFTRASEDLKTHMVVANTMEDFQKILD-SGKIVQIPFCGEIDCEDWIKKTTARDMGAKSLCIPFKPLCEQPGAKCVCGKN........... 300
5 -56.900sp|P07814|SYEP_HUMAN Bifunctional aminoacyl-tRNA synthetase OS=Homo sapiens GN=EPRS PE=1 SV=5 (Range: 1351-1512)  ali follow..  20  1.......................................................................................................................................................................................................................................................................................................................................................PGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVRRDTGEKLTVAEN-----------------EAETKLQAILEDIQVTLFTRASEDLKTHMVVANTMEDFQKILDSGK-IVQIPFCGEIDCEDWIKKTTARDMGAKSLCIPFKPLCEPGAKCVCGKNPAKYYTLFGRSY 162
6 -51.700sp|Q9BW92|SYTM_HUMAN Threonyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=TARS2 PE=1 SV=1 (Range: 301-600)  ali follow..  19  1....................DHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTLFSTKL-WEQSGHWEHYQEDMFAVQPPGSDRITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGLTRLRCFQQDDAHIFCTTDQ-LEAEIQSCLDFLRSVYAVLGALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVL.......................................................................................................................................................................................................................................... 299
7 -51.200sp|P26639|SYTC_HUMAN Threonyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=TARS PE=1 SV=3 (Range: 301-600)  ali follow..  16  2FPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRL-WMTSGHWQHYSENMFSF-----EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALGLTRVRRFQQDDAHIFCAMEQ-IEDEIKGCLDFLRTVYSVFGSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDKKRPVIVHRAILGSVERM.............................................................................................................................................................................................................................................. 300
8 -49.200sp|A2RTX5|SYTC2_HUMAN Probable threonyl-tRNA synthetase 2, cytoplasmic OS=Homo sapiens GN=TARSL2 PE=1 SV=1 (Range: 451-750)  ali follow..  15  1......................................................................VLSPNMYNSKL-WEASGHWQHYSENMFTF-----EIEKDTFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQFLQSVYSTFGSLMDFGEPWKMNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDKKRPVIIHRAILGSVERMIAILSENYGG-KWPFWLSPRQVMVIPVGPTCEKYALQ-----------VSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQY............................................................................................................................................................ 299
9 -44.000sp|A2RTX5|SYTC2_HUMAN Probable threonyl-tRNA synthetase 2, cytoplasmic OS=Homo sapiens GN=TARSL2 PE=1 SV=1 (Range: 301-600)  ali follow..  18  81FPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKL-WEASGHWQHYSENMFTF-----EIEKDTFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQFLQSVYSTFGF........................................................................................................................................................................................................................................................................................................................... 271
10 -41.600sp|A2RTX5|SYTC2_HUMAN Probable threonyl-tRNA synthetase 2, cytoplasmic OS=Homo sapiens GN=TARSL2 PE=1 SV=1 (Range: 601-802)  ali follow..  15  12...............................................................................................................................................................................................................NPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKRPVIIHRAILGSVERMIAILSENYGG-KWPFWLSPRQVMVIPVGPTCEKYALQ-----------VSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVRTRD--NKIHGEILVTSAIDKLKNLRKTRTLNAEEAF..................................................................................................... 202
11 -39.700sp|Q9BW92|SYTM_HUMAN Threonyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=TARS2 PE=1 SV=1 (Range: 151-450)  ali follow..  23  131FPTTELLRVWEAWREEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTLFSTKL-WEQSGHWEHYQEDMFAVQPPGSRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGGGLTR.................................................................................................................................................................................................................................................................................................................................................................. 300
12 -37.900sp|P26639|SYTC_HUMAN Threonyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=TARS PE=1 SV=3 (Range: 451-723)  ali follow..  13  1..........................................................................................................................................................GLTRVRRFQQDDAHIFCAMEQ-IEDEIKGCLDFLRTVYSVFGSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDKKRPVIVHRAILGSVERMIAILTENYGG-KWPFWLSPRQVMVVPVGPTCDEYAQK-----------VRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRD--NKVHGERTISETIERLQQLKEFRSKQAEEEF..................................................................................................... 273
13 -36.700sp|Q9BW92|SYTM_HUMAN Threonyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=TARS2 PE=1 SV=1 (Range: 451-718)  ali follow..  13  1..............................................................................................................................................................LRCFQQDDAHIFCTTDQ-LEAEIQSCLDFLRSVYAVLGALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGG-KWPLWLSPFQVVVIPVGSEQEEYAKE-----------AQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRD--NRRLGEWDLPEAVQRLVELQNTRVPNAEEIF..................................................................................................... 268
14 -36.000sp|P26639|SYTC_HUMAN Threonyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=TARS PE=1 SV=3 (Range: 151-450)  ali follow..  20  152FPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRL-WMTSGHWQHYSENMFSF-----EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL...................................................................................................................................................................................................................................................................................................................................................................... 299
15 -31.200sp|P41250|SYG_HUMAN(removed signalp:1-26) Glycyl-tRNA synthetase OS=Homo sapiens GN=GARS PE=1 SV=3 (Range: 451-713)  ali follow..  14  64...................................................................................................................................................................................................................................FTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGGRIMYTVFEHTFHVREFSFPAVVAPFKCSVLPLSQN--------QEFMPFVKELSEAL-TRHGVSHKVDDSSG-SIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANGNIT--------------ADVEARYPLFEGQETGKKETIEE...................................................................... 263
16 -27.800sp|Q9UHN1|DPOG2_HUMAN DNA polymerase subunit gamma-2, mitochondrial OS=Homo sapiens GN=POLG2 PE=1 SV=1  ali follow..  11  49.ELEGNGEHPEAPGSGEGSEALLEICQRRHFLSGSKQQGCHPGFGPLGVELRKNLAAEWWTSVFREQVFPVDALHHKPGPLL-PGDSAFRLVSAETLQLVAFLENVLKTSGKLRENLLHGALEHYVNCLDLVNRLPYGLAQIGVCFHPVFDTKQIVKSIGEKTEASLVWF-TPPRTSNQWLDFWLRHRLQWWRKFAMSPSNFSSSDCQDEEGRKGNKLYYN--KELIETLWNLGDHELLHMYPGNVSKLHGRDGRKNVVPCVLNGDLDRGMLAYLYDSFQLTENLKLHPCLAPIKVALDVGRGPTLELRQVCQGLFNELLE------NGISVWPGYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRSRDTTMKEM--MHISKLKDFLIKYISSAKN........................................................................................................... 484
17 -25.300sp|P41250|SYG_HUMAN(removed signalp:1-26) Glycyl-tRNA synthetase OS=Homo sapiens GN=GARS PE=1 SV=3 (Range: 151-450)  ali follow..  14  20....DKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGND-LSPPVSFNLMFKTFI------GPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSA.............................................................................................................................................................................................................................................................................................................................. 202
18 -21.900sp|P49590|SYHM_HUMAN(removed signalp:1-13) Probable histidyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=HARS2 PE=1 SV=1  ali follow..  10  19.RCQSQVAEAVLTSQLKAHQEKPNFIIKT--------PKGTRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGE----SGLMYDLK----DQGGELLSLRY-----LTVPFARYLAMNKVKKMKRYHVGKVWRRE-SPTIVQGRYREFCQCDFDIAGQFDPMIPDA--ECLKIMCEILSGLQLGDFLIKVNDRRQNKQALEGLGDLKLLFEYLTLFGIADKISFDLSLARIYEAVLLQTPTQAG---VPCVGLSIGVERIFYIVEQRMKTKGEKVRTTETQVFVATPQKNFLQERLK-----------LIAELWDSGIKAEMLYKNNPKLLTQLHYCESTGIPLVVIIGEQELKEGVIKI--RSVASREEVAIKRENFVAEIQKRLSES............................................................................................................. 493
19 -21.600sp|P49591|SYSC_HUMAN Seryl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=SARS PE=1 SV=3  ali follow..  13  150.DVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKVVAGSYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVM-QEVAQLSQFDEELYKVIGKGSEKSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVRDTRGIFRVHQFEKIEQFVYSSPHNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFLQELIPFVKPAPIEQEPSKKQKKQHEGSKKKA.......................................................................................................................................................................................... 495
20 -21.500sp|P12081|SYHC_HUMAN Histidyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=HARS PE=1 SV=2  ali follow..  21LKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDS---KLIYDLK----DQGGELLSLRY-----LTVPFARYLAMNKLTNIKRYHIAKVYRRD-NPAMTRGRYREFYQCDFDIAGNFDPMIPDA--ECLKIMCEILSSLQIGDFLVKVNDRRQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARIYEAVLLQTPAQAKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKLLEERLK-----------LVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKL--RSVTSREEVDVRREDLVEEIKRRTGQPLC........................................................................................................... 507
21 -19.900sp|Q9NP81|SYSM_HUMAN Seryl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=SARS2 PE=1 SV=1  ali follow..  13  199...............SFQPRGHLEIGEKLDIIRQKRLSHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPDLLRGAVF-EGCGMTPNANPSQIYNID---PARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRMVCSSTCYRAETQEPRGLYRVHHFTKVEMFGVTGPGEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMFQTEAGELQFAHTVNATACARLLIALLESNQQKDGVLVPPALQSY.......................................................................................................................................................................................................................... 484
22 -10.400sp|Q9P2K8|E2AK4_HUMAN Eukaryotic translation initiation factor 2-alpha kinase 4 OS=Homo sapiens GN=EIF2AK4 PE=1 SV=3 (Range: 1051-1350)  ali follow..  13  6...........................................FSIRTAKMQQHVCETIIRIFKRHGAVQLCTPLLLPRNRQIYEHN-------EAALFMDHSGMLVMLPFDLRIP--------FARYVARNNILNLKRYCIERVFRPRKLDR----HPKELLECAFDIVTSTTNSFLPTA-EIIYTIYEIIQEFPAL-------QERNYSIYLNHTMLLKAILLHCG----------EDKLSQVYIILYDAVTEKEVEAKFCNLSLSSNSLCRLYKFIEQKGD------LQDLMPTINSLIKQKTGIAQLVKYGLKDLEEVV-GLLKKLGIKLQVLINLGLVYKVQQHN----GIIFQFVAFIKRRQRAVPEI.......................................................................................................................................... 295
23 -10.400sp|A2RTX5|SYTC2_HUMAN Probable threonyl-tRNA synthetase 2, cytoplasmic OS=Homo sapiens GN=TARSL2 PE=1 SV=1 (Range: 151-450)  ali follow..  18  231FPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTE.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 300
24 -10.200sp|P41250|SYG_HUMAN(removed signalp:1-26) Glycyl-tRNA synthetase OS=Homo sapiens GN=GARS PE=1 SV=3 (Range: 301-600)  ali follow..  14  1..............................................................................................................................................GNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVS-ISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPNVIEPSFGLGRIMYTVFEHTFHVREGFSFPAVVAPFKCSVLPLSQNQE.............................................................................................................................................................................................................. 300
25 -9.390sp|Q9P2K8|E2AK4_HUMAN Eukaryotic translation initiation factor 2-alpha kinase 4 OS=Homo sapiens GN=EIF2AK4 PE=1 SV=3 (Range: 1201-1500)  ali follow..  13  144.........................................................................................................................................................................................................................................EILAAGGRYDLLIP-QFRGPQALGPVPTAIGVSIAIDKISAAVLNMEES------VTISSCDLLVVSVG----------QMSMSRAINLTQKL--TAGITAEIMYDWSQSQEELQEYCRHHEITYVALVSDKEGSHVKVKSFEKERQTEKR--VLETELVDHVLQKLRTKVTDERN....................................................................................................... 299
26 -9.330sp|Q9P2K8|E2AK4_HUMAN Eukaryotic translation initiation factor 2-alpha kinase 4 OS=Homo sapiens GN=EIF2AK4 PE=1 SV=3 (Range: 1351-1649)  ali follow..  10  23.........................................................................................................................................................................................................................................................................GVSIAIDKISAAVLNMEE-----VTISSCDLLVVSVG----------QMSMSRAINLTQKL--TAGITAEIMYDWSQSQEELQEYCRHHEITYVALVSDKEGSHVKVKSFEKERQTEKR--VLETELVDHVLQKLRTKVTDERNGREASDNLAVQNLKGSFSNASGLFEIHGATVVPIVSVLAPEKLSAST----QTRLQTSLANLHQKSSEIEILAVDLPKE........................ 232

FFAS is supported by the NIH grant R01-GM087218-01
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Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.