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Query: 4gn3_B mol:protein length:113 OBody AM1L10, from PDB1018

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst AMGSVYPKKTHWTAEITPNLHGTEVVVAGWVASLGDYGRVKIVKVSDREGGAAVSVYLEYGKTPDHLFKVFAELSREDVVVIKGIVEASKAAADMHNGVEIFPSEIWILNKAKLast
1 -39.600sp|Q6PI48|SYDM_HUMAN Aspartyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=DARS2 PE=1 SV=1  ali   23  45...SSFVVRTNTCGELRSSHLGQEVTLCGWIQYRRQNT---FLVLRDFDGLVQVIIPQD--ESAASVKKILCEAPVESVVQVSGTVISRPANPKMPTGIEIKVKTAELLNACK 153
2 -34.500sp|P14868|SYDC_HUMAN Aspartyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=DARS PE=1 SV=2  ali follow..  15  48............VRDLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGD-HASKQMVKFAANINKESIVDVEGVVRKVNQKIGTQQDVELHVQKIYVISLAE 149
3 -33.300sp|O43776|SYNC_HUMAN Asparaginyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=NARS PE=1 SV=1  ali follow..  18  111.......EPKCVKIGALEGYRGQRVKVFGWVHRLRRQGKLMFLVLRDGTGYLQCVLADELCQC-----YNGVLLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAP 212
4 -27.900sp|Q96I59|SYNM_HUMAN(removed signalp:1-16) Probable asparaginyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=NARS2 PE=1 SV=3  ali follow..  20  20................AQNASGERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSG-------LDSRELNFGSSVEVQGQLIKSPSKRQ---NVELKAEKIKVIGNCD 106
5 -15.700sp|Q15046|SYK_HUMAN Lysyl-tRNA synthetase OS=Homo sapiens GN=KARS PE=1 SV=3  ali follow..  15  100.......HVDISLTDFIQKYTDITLKVAGRIHAKRASGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQGNPGKTKKGE-----LSIIPYEITLLSPC. 209
6 -12.200sp|P35244|RFA3_HUMAN Replication protein A 14 kDa subunit OS=Homo sapiens GN=RPA3 PE=1 SV=1  ali follow..  14.............AGMLAQFIDKPVCFVGRLEKIHPTGKMFILSDGEG-KNGTIELMEPLDEEISGIVEVVGRVTAKATILCTSYVQFKEDSHPF--DLGLYNEAVKIIHDFP 110
7 -11.800sp|Q9H668|STN1_HUMAN CST complex subunit STN1 OS=Homo sapiens GN=OBFC1 PE=1 SV=2  ali follow..  12  55......................KQVDVLGTVIGVRERDAFYSYGVDDSTGVINCICWKKLNTESQETIEQKTKIEIGDTIRVRGSIRTYREER------EIHATTYYKVDDPV 159
8 -11.200sp|P15927|RFA2_HUMAN Replication protein A 32 kDa subunit OS=Homo sapiens GN=RPA2 PE=1 SV=1  ali follow..  72......................SQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTS---SENTVVPPETYVKVAGHLRSFQNKKSLVA--EFTTHILEVI.... 163
9 -10.700sp|Q13156|RFA4_HUMAN Replication protein A 30 kDa subunit OS=Homo sapiens GN=RPA4 PE=1 SV=2  ali follow..  13  72......................SQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGREKVKQV----TPLSVGVYVKVFGILKCPTGTK------SLEVLKIHVLEDMN 152
10 -9.880sp|Q96E14|RMI2_HUMAN RecQ-mediated genome instability protein 2 OS=Homo sapiens GN=RMI2 PE=1 SV=2  ali follow..  16  56......................AAVWMQGRVVMADRGE----ARLRDPSGDFSVRGLERVP-------RGRPCLVPGKYVMVMGVVQACSPEP------CLQAVKMTDLSD.. 127
11 -9.860sp|Q2NKJ3|CTC1_HUMAN CST complex subunit CTC1 OS=Homo sapiens GN=CTC1 PE=1 SV=2  ali   13  147...............LLPSAFCPAQVLLGVLVASSHKGC---LQLRDQSGSLPCLLLAKHSQPLSDPRLIGCLVRAERFQLIVERDVRSSQKQQARVYVQFFLADALILPVPR 254
12 -9.010sp|Q2NKJ3|CTC1_HUMAN CST complex subunit CTC1 OS=Homo sapiens GN=CTC1 PE=1 SV=2  ali   13  5.......................AQVLLGVLVASSHKGC---LQLRDQSGSLPCLLLAKHSQSDPRLIGCLVRAE-RFQLIVERDVRSS-QKQQARVYVQFFLADALILPVPR 104

FFAS is supported by the NIH grant R01-GM087218-01
1 3 3 2 1 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Berman HM, Burley SK, Chiu W, Sali A, Adzhubei A, Bourne PE, Bryant SH,Dunbrack RL Jr, Fidelis K, Frank J, Godzik A, Henrick K, Joachimiak A, HeymannB, Jones D, Markley JL, Moult J, Montelione GT, Orengo C, Rossmann MG, Rost B,Saibil H, Schwede T, Standley DM, Westbrook JD. Outcome of a workshop on archiving structural models of biological macromolecules. Structure. 2006 Aug;14(8):1211-7.