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Query: 1v7o_A mol:protein length:165 alanyl-tRNA synthetase, from PDB1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MYSIEVRTHSALHVVKGAVVKVLGSEAKWTYSTYVKGNKGVLIVKFDRKPSDEEIREIERLANEKVKENAPIKIYELPREEAEKMFGEDMYDLFPVPEDVRILKVVVIEDWNVNACNKEHTKTTGEIGPIKIRKVRFRKSKGLLEIHFELLELENPSLELast
1 -3.460HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523;  ali follow..  16  21..................................................................................................NAQRSQLLTVMADAVSEC-AAELNETGQVGLLRLAEV........................ 62
2 -3.370PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF  ali follow..  20  14................................................................................................PEDIESQTI--LKDAAATALYGSRGAN----GVVLITTKSGRRGKTHIAFTAEYG........ 62
3 -3.230PB009661 _Gut.Meta.Jp.0000785_ gi|162567239|dbj|BAAU01000237.1||2 (- 3549:4008~0 complete)  ali follow..  12  5..................................................EGELLDEAVDFCRKAVNSNMPEEEADMSALRSRKVSADMYIDDRNLGGLPDWGVIYEM................................................... 68
4 -2.590PB012472 gi|62259485|gb|AAX77857.1| unknown protein [synthetic construct]  ali follow..  13  1.................................................MTIENIIENLNIPTSRISKR-------IPKNSFETNTKLTSAEKKYLANDVKLITLESLVQQNIQV---AILDDEYNYSAINIISVQLNSVRNFKKI............. 89
5 -2.520PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;  ali follow..  12  60.KQTPCKGHPAQHATGTCCRGCIEK-----------------RIEAGKSLSQEEQAYILDVIAHWLDLQKE........................................................................................ 117
6 -2.490HGC00947 gi|162844524|dbj|BABA01000185.1|4.0 TMP01280;  ali follow..  32...................................MNARPMMQCYLYKIDGETERVVNDTLDSIILNNQKRVHGLSLPLRYTADSTVLVFHYSKDVKIKKDTIVI-NTPYFLSMDCG-TGRSYSRHLDSIYIQTAEVSIYGTELKLFY........... 164
7 -2.370HGC01215 gi|162843249|dbj|BABA01001460.1|3.0 TMP01713;  ali follow..  21  2......................................................................................................VGVFCVEGFSVDV---VHIR..................................... 20
8 -2.270PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete)  ali follow..  12  8...................................SETVMVIDVAYLNFVINDLRKYFEPLLGRSLQTDLALFTMYLAMDAGLKGSDNDVQVLLVYDKQSGKLEHCLPSDLKNELDGVAFKASLGEF-SFMAAPSEGFVSRGDLYLDLLQIVLNAAEVK 131
9 -2.210PB011130 gi|88806557|ref|ZP_01122074.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]gi|88783389|gb|EAR14561.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]  ali follow..  25  41..................................................SDEIIADIEARIAELFYEKMENERQVITQKEVDAV.......................................................................... 75
10 -2.110HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  10  13FDIAKQNQEKAWQVIKNTIWEDAGAKINLVGSLRTGLLMKHRDIDFHIYSSPLNLTDSFQAMARLAENPSIKRIECAN................................................................................. 94

FFAS is supported by the NIH grant R01-GM087218-01
1 3 3 2 5 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Jaroszewski L, Godzik A. Domain analysis of the tubulin cofactor system: a model for tubulin folding and dimerization. BMC Bioinformatics. 2003 Oct 10;4(1):46.