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Query: 4gn3_B mol:protein length:113 OBody AM1L10, from PDB1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst AMGSVYPKKTHWTAEITPNLHGTEVVVAGWVASLGDYGRVKIVKVSDREGGAAVSVYLEYGKTPDHLFKVFAELSREDVVVIKGIVEASKAAADMHNGVEIFPSEIWILNKAKLast
1 -9.520sp|Q2NKJ3|CTC1_HUMAN CST complex subunit CTC1 OS=Homo sapiens GN=CTC1 PE=1 SV=2 (Range: 505-700)  ali follow..  13  93...............LLPSAFCPAQVLLGVLVASSHKGC---LQLRDQSGSLPCLLLAKHSQPLSDPRLIGCLVRAERFQLIVERDVRSSQKQQARVYVQFFLADALIL.... 196
2 -6.890sp|Q9NX78|CN101_HUMAN UPF0679 protein C14orf101 OS=Homo sapiens GN=C14orf101 PE=1 SV=3 (Range: 239-319)  ali follow..  10............................TW-GDQTTLQGFLTHFLREEYGTFSLAKSEIGSSMSEILLSQVTNMRTELALAVCANICLATKDRQNP................. 81
3 -6.600sp|Q8N3J3|CQ053_HUMAN Uncharacterized protein C17orf53 OS=Homo sapiens GN=C17orf53 PE=2 SV=1 (Range: 454-570)  ali follow..  13  40.....................NKVPNMAVMIKSLTRSTMDASVVFKDPTGEMQGTVHRL---------------------------LLETCQNELKPGSVLLLKQIGVFSPSL 104
4 -6.210tr|D6RBT3|D6RBT3_HUMAN Uncharacterized protein OS=Homo sapiens GN=NDUFS6 PE=4 SV=1 (Range: 1-56)  ali follow..  25  30...............VRVSPTGEKVTHTGQVYDDKDYRRIRF....................................................................... 56
5 -6.210sp|O75380|NDUS6_HUMAN NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Homo sapiens GN=NDUFS6 PE=1 SV=1 (Range: 1-56)  ali follow..  25  30...............VRVSPTGEKVTHTGQVYDDKDYRRIRF....................................................................... 56
6 -5.460sp|Q8NHS9|SPT22_HUMAN Spermatogenesis-associated protein 22 OS=Homo sapiens GN=SPATA22 PE=1 SV=2 (Range: 241-363)  ali follow..  13  44..........................................FLMRDGKNTLPCVF---------EIDRELPRLIRGRVHRCVGNYDQKKNIFQCVSVRPASVSEQKTFQA.. 104
7 -5.200sp|Q86UK5|LBN_HUMAN Limbin OS=Homo sapiens GN=EVC2 PE=1 SV=1 (Range: 78-236)  ali follow..  10  84..TSENGVIFQKCALVSGSSEAQTARIWLLVNNTKTTSSLSELLLLD---------------------------------SIAGLTIWDSVGNRTSEGFQAFSKKF....... 156
8 -4.720tr|E9PQE9|E9PQE9_HUMAN Uncharacterized protein OS=Homo sapiens GN=TYK2 PE=4 SV=1 (Range: 25-134)  ali follow..  15  2.................................................GGLKVLLHWAGPGGGEPWVTFSESSAEEVCIHIAHKVVETGFHHVSQDGLDLLTSWSAHLSLPK 67
9 -4.550sp|Q6ZTY8|CL063_HUMAN Putative uncharacterized protein C12orf63 OS=Homo sapiens GN=C12orf63 PE=2 SV=2 (Range: 675-762)  ali follow..  13  16.....................................SMLKSMLLMEAEDRLNFLLSEVEQKTLSQCSAGELEIVVEARLQLAAVALQR----RAAYSAAIVFSTLTLLQDSK 88
10 -4.440sp|Q96GX1|TECT2_HUMAN Tectonic-2 OS=Homo sapiens GN=TCTN2 PE=2 SV=1 (Range: 501-697)  ali follow..  10  2........RENAVERLDSLIQATHVAMRGWLEIIRVD-------------APDPGADPLASSVNGMCLDIPAHLSIRILISDAGAVEGITQQEILGVETRFSSVNWQY..... 98

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.