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Query: 5OLI Entity 1(prereleased), from PDB1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GLAHSSCSPGGDPTAGAAWACFRLDGRTLLRVRGPDAAPFLLGLLTNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLYDVILYGLQEHSEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSPEACGAASLQERAGAAAILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGVPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPLPTSGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQVALAASVPDWWPTVSKLast
1 -6.090sp|Q5JXC2|MIIP_HUMAN Migration and invasion-inhibitory protein OS=Homo sapiens GN=MIIP PE=1 SV=3  ali   42..................................................................................................................................................................................................VRVSIPLSILEPPHRYHIHRRKSFDASDTLALPRHCLLGWDIF.......................................................................................... 84
2 -5.520sp|P18846|ATF1_HUMAN Cyclic AMP-dependent transcription factor ATF-1 OS=Homo sapiens GN=ATF1 PE=1 SV=2  ali   14  21..............QTSSGQYIAIAPNGALQLASPGTDG-VQGLQTLTMTNSGSTQQGTT----------------------ILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT................................................................................................................................................................................................... 115
3 -5.060sp|P82933|RT09_HUMAN 28S ribosomal protein S9, mitochondrial OS=Homo sapiens GN=MRPS9 PE=1 SV=2  ali   14  9.....................FNIGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFEKRARPVM-AIQWGEDGRPFHYLFY-----TGKQSYYSLMHDVYGMLLNLEKHQSHLQAKSLLPEKTVTRDVI.................................................................................................................................................................................................... 123
4 -4.780tr|E9PJL5|E9PJL5_HUMAN Uncharacterized protein OS=Homo sapiens GN=C12orf63 PE=4 SV=1  ali   15  3...........................PILQKNPVEQLLFAYKLLDRAIGGINLNC-----------MLTSLPNGSSVIDHCYAKRTHHIDGDTYKPLASNSFMMDL--HLELIQAQHRIAVV............................................................................................................................................................................................................ 85
5 -4.700sp|Q96N23|CL055_HUMAN Uncharacterized protein C12orf55 OS=Homo sapiens GN=C12orf55 PE=2 SV=2  ali   15  3...........................PILQKNPVEQLLFAYKLLDRAIGGINLNC-----------MLTSLPNGSSVIDHCYAKRTHHIDGDTYKPLASNSFMMDL--HLELIQAQHRIAVV............................................................................................................................................................................................................ 85
6 -4.680sp|A6NCD4|CJ131_HUMAN Uncharacterized protein C10orf131 OS=Homo sapiens GN=C10orf131 PE=4 SV=3  ali   16  41..................................................................................................................................................................................................................FVPSSSPVVNQRKLP-DEGFYIQRKPEIYKKTCNKMENRLLK........................................................................... 90
7 -4.610sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2  ali   13  3.......................LNHTIAIRFANLTPEEFVGDYWRNFQRALRNILGVRRN------------------DIQIVSLQSSEPHPHLDVLLFVEKPGS--KQLLHKINSSVTDIEEIIGVRILNV.................................................................................................................................................................................................. 97
8 -4.480tr|B0QYN4|B0QYN4_HUMAN L(3)mbt-like (Drosophila) (Fragment) OS=Homo sapiens GN=L3MBTL PE=4 SV=1  ali   18  53.................................................................................................................................................................................................QVAGCEPVSATVLPQLSAGPASSSTSTVRLLEWTEAAPPGGGLRFRISEYKPLN................................................................................ 108
9 -4.440sp|Q8IU80|TMPS6_HUMAN Transmembrane protease serine 6 OS=Homo sapiens GN=TMPRSS6 PE=1 SV=3  ali   27  10............................................................................................................................................................................................................EVDPEGLVILEASVKDIAALNSTLGCYVGQGQVLRLK...................................................................................... 50
10 -4.380tr|E9PDJ8|E9PDJ8_HUMAN Uncharacterized protein OS=Homo sapiens GN=FAT2 PE=4 SV=1  ali   13  8.......................LQQAMWMGFYQLTPEELVSDHWRNLQRFL---------------SHKLDIKRANIHLASLQPAEAVAGVDVLLVFEGHSGTFYEFQELASIITHSAKEMEHSVGVQMRSAMPMVP............................................................................................................................................................................................. 107

FFAS is supported by the NIH grant R01-GM087218-01
1 3 2 7 7 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. VISSA: a program to visualize structural features from structure sequence alignment. Bioinformatics. 2006 Apr 1;22(7):887-8. Epub 2006 Jan 24.