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Query: 5OLI Entity 1(prereleased), from PDB1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GLAHSSCSPGGDPTAGAAWACFRLDGRTLLRVRGPDAAPFLLGLLTNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLYDVILYGLQEHSEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPELRVWAVLPSSPEACGAASLQERAGAAAILIRDPRTARMGWRLLTQDEGPALVPGGRLGDLWDYHQHRYLQGVPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTARTHHMGVIRKRLFPVRFLDPLPTSGITPGATVLTASGQTVGKFRAGQGNVGLALLWSEKIKGPLHIRASEGAQVALAASVPDWWPTVSKLast
1 -6.090sp|Q5JXC2|MIIP_HUMAN Migration and invasion-inhibitory protein OS=Homo sapiens GN=MIIP PE=1 SV=3 (Range: 240-323)  ali follow..  42..................................................................................................................................................................................................VRVSIPLSILEPPHRYHIHRRKSFDASDTLALPRHCLLGWDIF.......................................................................................... 84
2 -5.520sp|P18846|ATF1_HUMAN Cyclic AMP-dependent transcription factor ATF-1 OS=Homo sapiens GN=ATF1 PE=1 SV=2 (Range: 83-201)  ali follow..  14  21..............QTSSGQYIAIAPNGALQLASPGTDG-VQGLQTLTMTNSGSTQQGTT----------------------ILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT................................................................................................................................................................................................... 115
3 -5.060sp|P82933|RT09_HUMAN 28S ribosomal protein S9, mitochondrial OS=Homo sapiens GN=MRPS9 PE=1 SV=2 (Range: 73-195)  ali follow..  14  9.....................FNIGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFEKRARPVM-AIQWGEDGRPFHYLFY-----TGKQSYYSLMHDVYGMLLNLEKHQSHLQAKSLLPEKTVTRDVI.................................................................................................................................................................................................... 123
4 -4.780tr|E9PJL5|E9PJL5_HUMAN Uncharacterized protein OS=Homo sapiens GN=C12orf63 PE=4 SV=1 (Range: 713-806)  ali follow..  15  3...........................PILQKNPVEQLLFAYKLLDRAIGGINLNC-----------MLTSLPNGSSVIDHCYAKRTHHIDGDTYKPLASNSFMMDL--HLELIQAQHRIAVV............................................................................................................................................................................................................ 85
5 -4.700sp|Q96N23|CL055_HUMAN Uncharacterized protein C12orf55 OS=Homo sapiens GN=C12orf55 PE=2 SV=2 (Range: 713-812)  ali follow..  15  3...........................PILQKNPVEQLLFAYKLLDRAIGGINLNC-----------MLTSLPNGSSVIDHCYAKRTHHIDGDTYKPLASNSFMMDL--HLELIQAQHRIAVV............................................................................................................................................................................................................ 85
6 -4.680sp|A6NCD4|CJ131_HUMAN Uncharacterized protein C10orf131 OS=Homo sapiens GN=C10orf131 PE=4 SV=3 (Range: 120-256)  ali follow..  16  41..................................................................................................................................................................................................................FVPSSSPVVNQRKLP-DEGFYIQRKPEIYKKTCNKMENRLLK........................................................................... 90
7 -4.610sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2 (Range: 3637-3738)  ali follow..  13  3.......................LNHTIAIRFANLTPEEFVGDYWRNFQRALRNILGVRRN------------------DIQIVSLQSSEPHPHLDVLLFVEKPGS--KQLLHKINSSVTDIEEIIGVRILNV.................................................................................................................................................................................................. 97
8 -4.480tr|B0QYN4|B0QYN4_HUMAN L(3)mbt-like (Drosophila) (Fragment) OS=Homo sapiens GN=L3MBTL PE=4 SV=1 (Range: 1-108)  ali follow..  18  53.................................................................................................................................................................................................QVAGCEPVSATVLPQLSAGPASSSTSTVRLLEWTEAAPPGGGLRFRISEYKPLN................................................................................ 108
9 -4.440sp|Q8IU80|TMPS6_HUMAN Transmembrane protease serine 6 OS=Homo sapiens GN=TMPRSS6 PE=1 SV=3 (Range: 187-242)  ali follow..  27  10............................................................................................................................................................................................................EVDPEGLVILEASVKDIAALNSTLGCYVGQGQVLRLK...................................................................................... 50
10 -4.380tr|E9PDJ8|E9PDJ8_HUMAN Uncharacterized protein OS=Homo sapiens GN=FAT2 PE=4 SV=1 (Range: 811-919)  ali follow..  13  8.......................LQQAMWMGFYQLTPEELVSDHWRNLQRFL---------------SHKLDIKRANIHLASLQPAEAVAGVDVLLVFEGHSGTFYEFQELASIITHSAKEMEHSVGVQMRSAMPMVP............................................................................................................................................................................................. 107

FFAS is supported by the NIH grant R01-GM087218-01
1 2 7 7 0 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Osterman A, Overbeek R, Godzik A. Automatic detection of subsystem/pathway variants in genome analysis. Bioinformatics. 2005 Jun 1;21 Suppl 1:i478-i486.