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Query: 1ati_A mol:protein length:505 GLYCYL-TRNA SYNTHETASE, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst AASSLDELVALCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFQDLRGPRGGRGLLAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEYWHRYWVEERLKWWQEMGLSRENLVPYQQPPESSAHYAKATVDILYRFPHGSLELEGIAQRTDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLVKNRPEITEYAKRLKARLLALGLGRVLYEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDTMEQIRLHVDELEGFLRERLRWLast
1 -168.0001ati_A mol:protein length:505 GLYCYL-TRNA SYNTHETASE  ali model  100  1AASSLDELVALCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFQDLRGPRGGRGLLAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEYWHRYWVEERLKWWQEMGLSRENLVPYQQPPESSAHYAKATVDILYRFPHGSLELEGIAQRTDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLVKNRPEITEYAKRLKARLLALGLGRVLYEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDTMEQIRLHVDELEGFLRERLRW 505
2 -134.0002pme_A mol:protein length:693 Glycyl-tRNA synthetase  ali model follow..  32  63DIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQ-EEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGND--LSPPVSFNLMFKTFIGPGG--NMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLVAEKPLKEPDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVR--EGDEQRTFFSFPAVVAPFKCSVLPLSQN-QEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKT-------PHTATLRDRDSMRQIRAEISELPSIVQDLAN. 657
3 -132.0001b76_A mol:protein length:442 Glycine--tRNA ligase  ali model follow..  97  1AASSLDELVALCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNAKARYWTPPRY---------------------------------------------------------------FNMMFQDLRGPRGGRGLLAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEYWHRYWVEERLKWWQEMGLSRENLVPYQQPPESSAHYAKATVDILYRFPHGSLELEGIAQRTDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLVKNRPEITEYAKRLKARLLALGLGRVLYEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDTMEQIRLHVDELEGFLRERLRW 442
4 -96.7005c51_B mol:protein length:485 DNA polymerase subunit gamma-2, mitochondrial  ali model follow..  24  62SGEGSEALLEICQRRHFLSGSKQQLSRDSCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLLPGDSAFRLVSAETLREILQDKELSKEQLVAFLENV---------------------------------------------------------------------LKTSGKLRENLLHGALEHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKNGVKSIGEKTEASLVWFTPPRTSNQWLDFWLRHRLQWWRKFAMSPSNFSSSDCQDEE----GRKGNKLYYNFPWGKELIETLWNLGDHELLHMYPGNVSKLHG-----------------RDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENKKNLHRKVLKLHPCLAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENG---------LIHLRSRDTTMKEMMHISKLKDFLIKYIS. 480
5 -96.7002g4c_A mol:protein length:474 DNA polymerase gamma subunit 2  ali model follow..  24  45SGEGSEALLEICQRRHFLSGSKQQLSRDSCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLLPGDSAFRLVSAETLREILQDKELSKEQLVTFLENV---------------------------------------------------------------------LKTSGKLRENLLHGALEHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKNGVKSIGEKTEASLVWFTPPRTSNQWLDFWLRHRLQWWRKFAMSPSNFSSSDCQDEEGRKGN----KLYYNFPWGKELIETLWNLGDHELLHMYPGNVSKLHGRD-----------------GRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENKKNLHRKVLKLHPCLAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENG---------LIHLRSRDTTMKEMMHISKLKDFLIKYIS. 463
6 -95.0004ztu_B mol:protein length:472 DNA polymerase subunit gamma-2, mitochondrial  ali model follow..  24  38SGEGSEALLEICQRRHFLSGSKQQLSRDSCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLLPGDSAFRLVSAETLREILQDKELSKEQLVAFLENV---------------------------------------------------------------------LKTSGKLRENLLHGALEHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKNGVKSIGEKTEASLVWFTPPRTSNQWLDFWLRHRLQWWRKFAMSPSNFSSSDCQDEEGRKGN----KLYYNFPWGKELIETLWNLGDHELLHMYPGNVSKLHG-----------------RDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENKKNLHRKVLKLHPCLAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENG---------LIHLRSRDTTMKEMMHISKLKDFLIKYIS. 456
7 -90.9001g5h_A mol:protein length:454 MITOCHONDRIAL DNA POLYMERASE ACCESSORY SUBUNIT  ali model follow..  25  20HAVAREALVDLCRRRHFLSGTPQQLSTAALLARFGPLGVELRKNLASQWWSSMVVFREQVFAVDSLHQEPGSSQPRDSAFRLVSPESIREILQDREPSKEQLVAFL---------------------------------------------------------------------ENLLKTSGKLRATLLHGALEHYVNCLDLVNRKLPFGLAQIGVCFHNSNQTPSSVTRVGEKTEASLVWFTPTRTSSQWLDFWLRHRLLWWRKFAMSPSNFSSA----DCQDELGRKGSKLYYSFPWGKEPIETLWNLGDQELLHTYPGNVSTIQGRD-----------------GRKNVVPCVLSVSGDVDLGTLAYLYDSFQLAENKKSLQRKVLKLHPCLAPIKVALDVGKGPTVELRQVCQGLLNELLENGISVYSETVHSSLEQLHSKYDEMSVLFSVLVTETTLENG---------LIQLRSRDTTMKEMMHISKLRDFLVKYLA. 438
8 -85.0003ikl_A mol:protein length:459 DNA polymerase subunit gamma-2, mitochondrial  ali model follow..  19  2........................................................RSRVAVRACHKVCRCLLSGFGGRVDAGQPELLTERPKGGHVKSHAELEGNGEHPEAPGSGEGSEALLEICQRRHFLSGSKQELRKNLAAEWWTSVVVFREQVFPV---DALHHKPGPLLPGDSAFRGGLRENLLHGALEHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTRNGVKSIGEKTEASLVWFTPPRTSNQWLDFWLRHRLQWWRKFAMSPSNFSSSDCQDEE----GRKGNKLYYNFPWGKELIETLWNLGDHELLHMYPGNVSKLH-----------------GRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENKKNLHRKVLKLHPCLAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENG---------LIHLRSRDTTMKEMMHISKLKDFLIKYIS. 448
9 -78.9005c53_B mol:protein length:903 Pol gamma B  ali model follow..  18  393.EQLYSKYDEMSILFTVLVTETTLENGLIHLRSRDTT-SKLKDFLIKYISSAKNVMRSRVAVRACHKVCRCLLSGFGGRVDAGQPELLTERPKGGHVKSHAELEGNGEHPEAPGSGEGSEALLEICQRRHFLSGSKQQLSRDSLRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLLPGDSAFRLRENLLHGALEHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKNGVKSIGEKTEASLVWFTPPRTSNQWLDFWLRHRLQWWRKFAMSPSNFSSSDC----QDEEGRKGNKLYYNFPWGKELIETLWNLGDHELLHMYPGNVSKLHG-----------------RDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSKNLHRKVLKLHPCLAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENG---------LIHLRSRDTTMKEMMHISKLKDFLIKYIS. 898
10 -45.2004p3n_A mol:protein length:415 Threonine--tRNA ligase, cytoplasmic  ali model follow..  14  2.............................................................................................GSSSSGDHIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMF-SFEVEKELFALKPMNCPGHCLMFDHRPRSWR-ELPLRLADFGVLHRNELSALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFS---FKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVG---PTCDEYAQKVRQQFHDAKFMADIDDPGCTLNKKIRNAQLAQYNFILVVGEKEKISG---------TVNIRTRDNKVHGERTISETIERLQQLKE. 399
11 -44.5004hwt_A mol:protein length:413 Threonine--tRNA ligase, cytoplasmic  ali model follow..  14  1................................................................................................MARDHIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMF-SFEVEKELFALKPMNCPGHCLMFDHRPRSWR-ELPLRLADFGVLHRNELSALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFS---FKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVG---PTCDEYAQKVRQQFHDAKFMADIDDPGCTLNKKIRNAQLAQYNFILVVGEKEKISG---------TVNIRTRDNKVHGERTISETIERLQQLKE. 395
12 -44.1001nyq_A mol:protein length:645 threonyl-tRNA synthetase 1  ali model follow..  13  140.VVSRDEAKELFSNDEYKLENVTLYS--GDFTDLGVHEFKLLSTAGAYWRGD---SNNKMLQRIYGT-----AFFDKKELKAHLQMLEERKERDHRKIGKEL---ELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMLRPMNCPHHMMIYANKPHSYR-ELPIRIAELGTMHRYEASAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYDDDMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDF-LLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNVDLH--YDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENN---------QVNVRQYGSQDQETVEKDEFIWNLVDEIR. 640
13 -43.9004hwo_A mol:protein length:411 Threonine--tRNA ligase  ali model follow..  14  1................................................................................................MARDHIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMF-TTSSENREYCIKPMNCPGHVQIFNQGLKSYR-DLPLRMAEFGSCHRNEPSSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGF--EKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF-SLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT---DSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESG---------KVAVRTRRGKDLGSMDVNEVIEKLQQEIR. 394
14 -41.7002i4l_A mol:protein length:458 Proline-tRNA ligase  ali model follow..  14  29PKEAEIVSHRLMLRAGMLRQEA------AGIYAWLPLGHRVLKKIEQIVREEQ--NRAGAIELLMPTLQLADLWRESGRYDAYGPEM-------------------------------------------------------------------------------------LRIADRHKRELLYGPTNEEMITEIFRAYIKSYK-SLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAARKSYNKMFVAYLRTFARMGLK--AIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYDGDLTPIIKQWTSVYAATEDVHEYFGTKYSDSMKANVTGPDGTDAPIHGGSYGVGVSRLLGAIIEACH-IIWPEAVAPFRVTILNLKQGDAATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQIHVGPRGLAEG---------KVELKRRSDGARENLALADVVARLT..... 452
15 -41.3003a31_A mol:protein length:471 Probable threonyl-tRNA synthetase 1  ali model follow..  12  2........................................................................ASGQDKTHIDYAYELDITV------KPDSRVPVFNREFATFTGAGVPLFSLGGGPIRYALAEVLAKFHARRGYYVVETPIIASTELFKVSGHIEFYRNNMY-LFDIEGHEFAVKPMNCPYHILLFLNEVAKHRSPLPFKVFEFGRVHRYEPSSIYGLLRVRGFTQDDAHIIVPGGRVIDVVYDVFEEMKLVLERLGVSSETFKVRLSMIGKEFMGSKEEWEGAEEALREAASRINEKYGIDIVEAAFYGPKLDFIEESGVSKEWQMGTIQFDFNLPRRFRLYDVVREEFGIEEVYIIHRALLGSIERFLGVYLEHRRGRMPFTLAPIQFAVIAVKTGGREIEDLASSIAKGLLDKGFRVAVKGSSKGLSSDVRHIESTAKPAVNVF--------IGAKEVREKVLDVRVFDLESMKRRRLAIAYGDAADAVE. 440
16 -41.1001qf6_A mol:protein length:642 THREONYL-TRNA SYNTHETASE  ali model follow..  13  157........VSILDENIAHDDKPGLYFH-EEYVDMGPHHFKLMKTAGAYWRGD---SNNKMLQRIYGT-----AWADKKALNAYLQRLEEAAKRDHR----KIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMF-TTSSENREYCIKPMNCPGHVQIFNQGLKSYR-DLPLRMAEFGSCHRNEPSSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLS--TRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF-SLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT---DSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESG---------KVAVRTRRGKDLGSMDVNEVIEKLQQEIR. 633
17 -40.6003ugq_A mol:protein length:460 Threonyl-tRNA synthetase, mitochondrial  ali model follow..  9  13..................................................................................SHMASATKNASSATPATMTVSQRQDLFMTDPLSPGSMFFLPNGAKIFNLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMFKVEDEEKEEYGLKPMNCPGHCLIFGKKDRSYN-ELPLRFSDFSPLHRNEASALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLDIMVTDHLRKTHQVATIQLDF-QLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMALLIDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKPLNDWHFNVDLDIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQ---------KYNIRERDNRKSFKLTMSQIWEKFIELEK. 451
18 -39.6004k86_A mol:protein length:535 Proline--tRNA ligase  ali model follow..  12  38EENLADWYSQVITKSEMI------YHDISGCYILRPWAYAIWEAIKDFFDAEI--KKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSG--------------------------------------------------------------------------------KTELAEPIAIRPTSETVMYPAYAKWVQSHR-DLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHSAATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGDYTTTIEAFISASGRAIQ-GGTSHHLGQNFSKMFEIV---------------------FEDPKIPGEKQFAYQNSWGLTTRTIGVMTMVHGDNM---------LVLPPRVACVQVVIIPCEEDKEALIAKCNDYRRRLLSVNIRVRADLRDNSPGWKFNHWELKGVPIRLEVGPRDMKSC---------QFVAVRRDTGEKLTVAENEAETKLQAILE. 423
19 -39.2001nj1_A mol:protein length:501 Proline-tRNA Synthetase  ali model follow..  18  31MTEFSEWFHNILEEAEIIDQRYPV----KGMHVWMPHGFMIRKNTLKILRRILDRDHEEVL----LLVPEDELAKEAIHVKGFEDEV---------------------------------------------------------------------------------YWVTHGGLSKLQRKLALRPTSETVMYPMFALWVRSHTD-LPMRFYQVVNTFRYETKHTPLIRVREITTFKEAHIHATASEAEEQVERAVEIYKEFFNSLGIP---YLITRRPPWDKFPGSEYTVAFDTLMPDGKTLQIGTVHNLGQTFARTFE-----------------------IKFETPEGDHEYVHQTCYGLSDRVIASVIAIHGDES---------LCLPPDVAAHQVVIVPIIKAAEEVMEACRELRSRLEAAGFRVHLDDRDIRAGRKYYEWEMRGVPLRVEIGPRDLEKG---------AAVISRRDTGEKVTADLQGIEETLRELMK. 407
20 -38.4004ncx_A mol:protein length:506 Proline--tRNA ligase  ali model follow..  13  13IENFSDWYTQVIVKSELI------YYDISGCYILRPAAYYIWECVQAFFNKEI--KKLNVENSYFPLFVTKNLEKEKNHIEGFSPEVAWVTKYGD---------------------------------------------------------------------------------SNLPEEIAIRPTSETIMYSVFPKWIRSYR-DLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGHTAHKNEEEAVKL---VFDILDLYRRWYEEYLAVPIIKGIKSEGEKFGGANFTSTAEAFIS-ENGRAIQAATSHYLGTNFAKMFKIEFEDENEVKQ-------------------YVHQTSWGCTTRSIGIMIMTHGDDK---------LVLPPNVSKYKVVIVPITTDENAIHSYCKDIEKILKNAQINCVYDDRASSPGYKFNHWELRGIPIRIEVGPKDLQNN---------SCVIVRRDNNEKCNVKKESVLLETQQMLV. 392
21 -38.4004hvc_A mol:protein length:519 Bifunctional glutamate/proline--tRNA ligase  ali model follow..  13  22EENLADWYSQVITKSEMI------YHDISGCYILRPWAYAIWEAIKDFFDAEI--KKLGVENCYFPMFVSQSALEKEKHVADFAPEVAWVTRSGK---------------------------------------------------------------------------------TELAEPIAIRPTSETVMYPAYAKWVQSHRD-LPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHSAATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGDYTTTIEAFISASGRAIQGGTS-----HHLGQNFSKMFE-----------------IVFEDPKIPGEKQFAYQNSWGLTTRTIGVMTMVHGDNM---------LVLPPRVACVQVVIIPCEEDKEALIAKCNDYRRRLLSVNIRVRADLRDNSPGWKFNHWELKGVPIRLEVGPRDMKSC---------QFVAVRRDTGEKLTVAENEAETKLQAILE. 407
22 -38.4005f9y_A mol:protein length:511 Aminoacyl-tRNA synthetase  ali model follow..  15  17ITSFADWYSQVIVKSEMI------YYDISGCYILRPWSYFIWETIQSVFDQKI--KQHDVQNAYFPIFVTQKLETEKDHVEGFSPEVAWVTKSGK---------------------------------------------------------------------------------SDLAEPIAIRPTSETIMYPYFAKWIRSHR-DLPLKINQWTSIVRWEFKHPTPFIRTREFLWQEGHTAHSTRKEALEM---VDIILNEYASIYEDLLATPVVKGTKSENEKFPGGDITKSIEGFI--EIGRAVQAATSHLLGQNFSKMFGVEFEDEKGNKE-------------------YAHQTSWGLTTRAIGVMIMTHGDNK---------LVLPPKVAPVQVIIIPITVITEEQKKICNEVECILKKAGVRVKIDDRSNTPGWKYNHWEVKGVCLRFEVGPRDIEKR---------SVRVVVRDNMEKMDIPISELESKIPKLLE. 396
23 -37.6005xip_A mol:protein length:498 Prolyl-tRNA synthetase, putative  ali model follow..  14  10STNFADWYTQVIVRGELV------YYDISGCYIIRPWAYRIWEAVQKFFDDGI--KRLGVENCYFPMFVSQALEKEKDHVEGFKPEVAWVTHYGD---------------------------------------------------------------------------------SELPEKVAIRPTSETIMYPAYAKWIRSHR-DLPLKLNQWNNVVRWEFKQPTPFLRTREFLWQEGHTAHATEEEAYTL---VLEILELYRQWY---EDYLAVPVIKGEKSENEKFAGGKKTTTIEGIIPDTGRGIQAATSHLLGQNFSRMFSIEFEDEKGAKQ-----------------LVHQTSWGCTTRSLGVMIMTHGDDK---------LVLPPRVVAVQAVIIPIIFKETGIVAKCRELERLLNAAGVRVKVDDRTNTPGWKFNDWELKGVPLRLEIGPRDVESC---------QTRVVRRDTSEARNVPWAEAASTIPAMLE. 389
24 -37.6005xif_A mol:protein length:500 Prolyl-tRNA synthetase (ProRS)  ali model follow..  15  9DENFSEWYTQAIVRSEMIE-----YYDISGCYIMRPWAFHIWEKVQRFFDDEI--KKMGVENSYFPMFVSRHLEKEKDHVEGFSPEVAWVTHYGD---------------------------------------------------------------------------------SPLPEKIAIRPTSETIMYPAYAKWIRSHR-DLPLKLNQWCSVVRWEFKQPTPFLRTREFLWQEGHTAATEEEAWELVLDILELYRRWYEECLAVPVIKGEKSEGEKFAGGKKTTTVEAFIPENGRGIQAATS-----HLLGTNFAKMFEIEFEDEEGHKR-------------------LVHQTSWGCTTRSLGVMIMTHGDDK---------LVIPPRVASVQVVIIPIDENTGEILGKCRELKTMLEKADIRVRIDDRSNTPGWKYNHWEVKGVPLRLELGPKDLAKG---------TARVVRRDTGEAYQISWADLAPKLLELME. 388
25 -37.1005xil_A mol:protein length:512 Putative prolyl-tRNA synthetase  ali model follow..  12  10EENFSAWYIDVITKAEMI------YYDVSGCYIIRPWAYYVWKCVQRFLGGKI--EKLGVEDCYFPMFVSRSLEREKDHIEGFAPEVAWVTRAGD---------------------------------------------------------------------------------TELEQPVAVRPTSETVMYPYYAKWIRSHRD-LPVRLNMWNNVIRWEFSHPTPFIRTREFLWQEGHCAWAKEECAKEVLEILECYASVYEQLLAVPVVRGRKTEKEKFAGGDYTTTVETFIEAVGRGCQ-GATSHNLGQNFGKMFDIR---------------------FQDPENNEQTLIPWQNSWGLSTRVIGVMIMVHGDNR---------MVMPPRVASTQVIIIPVEEARQELLASCWRLESELCEGGVRARCDLRDNSPGWRFNHWEVKGVPLRVELGPRELAER---------SLAVAVRHSGARHSVAWDAQTPAAVAAL.. 394
26 -36.8001h4q_A mol:protein length:477 PROLYL-TRNA SYNTHETASE  ali model follow..  17  11SQDFSEWYLEVIQKAELA------YGPVRGTIVVRPYGYAIWENIQQVLDRMF--KETGHQNAYFPLFIPMSLRKEAEHVEGFSPELAVVTHAGG---------------------------------------------------------------------------------EELEEPLAVRPTSETVIGYMWSKWIRSWRD-LPQLLNQWGNVVRWEMRT-RPFLRTSEFLWQEGHTAHTREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMK------DGKALQAGTSHYLGENFARAFDIKFQDRDLQVK-------------------YVHTTSWGLSWRFIGAIIMTHGDDR---------LVLPPRLAPIQVVIVPIYKSRERVLEAAQGLRQALLAQGLRVHLDDRDQTPGYKFHEWELKGVPFRVELGPKDLEGG---------QAVLASRLGGKET-LPLAALPEALPGKLD. 386
27 -36.0003ial_A mol:protein length:518 Prolyl-tRNA synthetase  ali model follow..  15  15RDTFADWFDAIMDAAELVDRRYPV----KGCVVFRPYGFFMENAIMRLCEEEY--AKVGISQILFPTVIPESFKKESDHIKGFEAEC---------------------------------------------------------------------------------FWVEKGGLQPLEERLALRPTSETAIYSMFSKWVRSYK-DLPLKIHQTCTIFRHETKNTKPLIRVREIHWNEAHCCHATAEAVSQLSDYWKVIDTIFSDELCFKGQKLRRVCWDRFPGADYSEVSDVVMPLQTAGIHNLGQRFSSTFDILYANKANESV-----------------------------HPYLTCAGISTRVLACALSIHGDSG---------LVLPPLIAPIHVVIIPIGCGKKNNQESDQQVLGKKSKLGLRVSIDDDFSSMGDKLYYYELKGVPLRIEVGQRDLANG---------QCIVVPRDVGKDQKIPITEVMKVSSHTTE. 401
28 -35.7001nj8_A mol:protein length:459 Proline-tRNA Synthetase  ali model follow..  18  4MLEFSEWYSDILEKAEIY----DVRYPIKGCGVYLPYGFKIRRYTFEIIRNLL--DESGHDEALFPMLIPEDLLAKEAHIKGFED---------------------------------------------------------------------------------EVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHT-DLPIKIYQIVNTFRYETKHTRPLIRLREITFKEAHTASTKEEAENQVKEAISIYKKFFDTLGIP---YLISKRPEWDKFPGAEYTMAFDTIFPDGRTMQIATVHNLGQNFSKTFEII------------------------ETPTGDKDYAYQTCYGISDRVIASIIAIHGDEK---------LILPPIVAPIQVVIVPLIKGKEDIVMEKAKEIYEKLKGKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENK---------KITLFRRDTMEKFQVDETQLMEVVEKTLN. 380
29 -33.2002j3l_A mol:protein length:572 PROLYL-TRNA SYNTHETASE  ali model follow..  13  24.........QILLRAGYIRQVA------AGIYSYLPLANRVLEKLKTIMREEF--EKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRN-------------------------------------------------------------------------------------DRDYILGPTHEETFTELIRDEINSYK-RLPLNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFADEASLDQSYRDYEKAYSRIFERCGLE-----FRAIIGDGGAMGGKDSKEFMAISEIG-CYSTESDYAANLEMATSLYTPKKSHETQLDLETRYSDAMGATVLDENGREKSVIMGCYGIGVSRLLSAIVEQNADER----------INWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVGKKAVD----------GVVEVKIKRTGEMLEVRKEELESTLSILMN. 566
30 -29.5005ucm_A mol:protein length:579 Proline--tRNA ligase  ali model follow..  14  26.........QLLLRAGMIRRLA------SGLYTWLPMGLRVLRKVETIVREEM--NAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLK-------------------------------------------------------------------------------------DRHEREFCVGPTHEEVITDLARNELNSYK-QLPINFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFLSQDSLQQTYDGMYQAYSKIFSRLGLDSHEFHVLANSGEDDIVFSDSS-KTLVVHGAEEGTLVALIVRGDHELNEIVIKRGIEVGHIFQLGTKYSEAMKLSVLSEQGKPVNLIMGCYGIGVSRVVAAAIEQNHDER----------ILWPSALAPFQIALVPLKYETESVKQATDKLYAELTAAGFEVLLDDRDKSPGVKFADMELIGIPHRIVISDRGLSEG---------VLEYKGRRDSESQNLPIGELMSFITEKLS. 572
31 -22.2003qne_A mol:protein length:485 Seryl-tRNA synthetase, cytoplasmic  ali model follow..  13  140................................................................................EQIAAATGAPAKLSHHEVLLRLDGYDPERGVRIVGHRGYFLRNYGVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGLP---YRVVGIVSGELNNAAAKKYDLEAWFP-EYKELVSCSNCTDY-------------------QSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTICCILENYQKED---------LVIPEVLRKY-------IPGEPEFIPYIKELPKNTTSVKKAKGKNPKNTTSVKKAKGKN......................................................... 476
32 -19.9001qe0_A mol:protein length:420 Histidine--tRNA ligase  ali model follow..  11  13..........................................................................................................................PEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGDSTDVVQKEMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYE-RKQKG--RYRQFNQFGVEAIGAENPSVD--AEVLAMVMHIYQSFGLKHLKLVINSVGDMAEPVIHEFCSDCQSRLHTDPMRILDCKVDRDKEAIKTAPRITDFLNEESKAYYEQVKAYLDDLGIPYTTHTAFELMMDNPNYDGAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLA-IVTMGDQADRYAVKLLNHLRHNGIKADKDYLQRKIKGQMKQADRLGAKFTIVIGDQELENN---------KIDVKNMTTGESETIELDALVEYFKK.... 420
33 -18.3002cim_A mol:protein length:522 SERYL-TRNA SYNTHETASE  ali model follow..  11  197.....EDPTQAMMKEGWLKRGSS-----RGQWIHGPQSARIFRTFEKIVLEELL-EPLGYREMIFPKLVTWEVWMKSGHAKGVYPEIY--------------------YVCPPQTRDPDYWEEVADYYKVTHEVPTKLIKEKI-----------------------------------AEPIGGMCYAQCPPFWMYVAGETLPNE-EIPVKVFDRGTSHRYESGGIHGIERVDEFHRIEIVWIGTKEEVLKCAEELHDRYMHIFNDILDVTPWFMAQEGLLGLAEENTVGTTDYEACLPYRGPDGEWLEFQNVSINGDKYPKG---------------------FNVKLQSGDELWSGCSGVGLERWAAVFL-------------AQKGLDPANWPEEFRNRVGEMPK................................................................................................. 511
34 -18.3003hrk_A mol:protein length:456 Histidyl-tRNA synthetase  ali model follow..  13  9.................................................................................................QTQGPGSMQKNMVETEPVQGCRDFPPEAMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKA--EEITEQMFNFITKGGHRVALRPEMTPSLARLL--LGKGRSLLLPAKWYSIPQCWRYE-AITRG--RRREHYQWNMDIVGVKSVSAE--VELVCAACWAMRSLGLSSKDVGIKVNSRKPVCVIVDKMEKIPREEVEAQLAVLGLEPTVVDAITTTLSLKSIDEIAQRVGEEHEAVKELRQFFEQVEAYGYGDWVLFDASVVR--LAYYTGIVFEGFDREGKFRALCGLPDIPHVVDDVVIPFD---ESMRPHALAVLRRLRDAGRSADIILDKKKVVQAFNYADRVGAVRAVLVAPEEWERG---------EVQVKMLREGTGKEEGGAERGFAVPL.... 446
35 -18.2004rdx_A mol:protein length:423 Histidine--tRNA ligase  ali model follow..  16  16..........................................................................................................................GKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGAATDIVRKEMFTFQDRGGRSLTLRPEGTAAMVRAYLE--GMKVWPQPVRLWMAGPMFRAE-RPQKG--RYRQFHQVNYEALGSENPILD--AEAVVLLYECLKELGLRRLKVKLSEDSKERLELNPMRILDSKSERDQALLKELGVRPMLDFEVERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEFGLPEEKGPDLYLIPLTEEAVAEAFYLAEALRP-RLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAG---------EVTLKRLATGEQVRLSREEVPGYLLQALG. 423
36 -18.1003hri_A mol:protein length:456 Histidyl-tRNA synthetase  ali model follow..  14  9.................................................................................................QTQGPGSMQMNMVETEPVQGCRDFPPETMRLRKYLFDVFHSTARKFGFEEYDSPVLESEELYIRKA--EEITEQMFNFITKGGHRVALRPEMTPSLARQL--LAKGRSLLLPAKWYSIPQCWRYE-AITRG--RRREHYQWNMDIIGVKSVSSE--VELVCAACTAMQSLGLSSKDVGVKINSSADKFAPVCVIVDKMEKLPRE-LAAIGLESNVVDAITSTLSLKTIDEIAQRIGEEHEAVRELRDFITQIEAYGFGDWVIFDASVVRGLAYYTGIVFEGFDRDGNFRALCGLLPELHHVVDDLVIPF---DETMRPHALSILRRLRDAGRSADIVFDKKKVVQAFNYADRIGALRAVLVAPDEWARG---------EVRVKMLREGAGREEGANERGIVLPV.... 446
37 -18.0001wu7_A mol:protein length:434 Histidyl-tRNA synthetase  ali model follow..  11  1..........................................................................................................MYRLQIEKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKS--EELLQQTYSFVDKGGREVTLIPEATPSTV---RMVTSRKDLQRPLRWYSFPKVWRYE-EPQAG--RYREHYQFNADIFGSDSPEAD--AEVIALASSILDRLGLQDIRINSRKIMEEIIGGMTSSDPFSVFSIIDRYHKISREEFVDQLRSAGIGEDGVSMIADLCSGTRGIDEMARITGKSSEEIARMAAVEDASYGVKNVRYDFSIVRGLSYYTGIVFE-LLLKRENVQIPREKKSVYICRVGKINSSIMNEYSRKLRERGMNVTVEIMERGLSAQLKYASAIGADFAVIFGERDLERG---------VVTIRNMYTGSQENVGLDSVVEHLISQAT. 426
38 -17.6003net_A mol:protein length:465 Histidyl-tRNA synthetase  ali model follow..  12  23..........................................................................................................................PSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKG--NIIYAEKDKSGDTGSEARALKFDQTVPLAAYIAR--HLNDLTFPFARYQMDVVFRGE-RAKDG--RFRQFRQCDIDVVGREKLSLLYDAQMPAIITEIFEAVNIGDFVIRINNRKSETQIKSCISIIDIGEAKVKLELEKEGINPEQTQKIIDFVKIDGSVDDVLDKLKHLSQTLPESEQFNLGVSEYTGTVYETTLIGHEALGSICSGGRYEELVGTFIGEKMPGVGISIGLTRLISR-VVNMQDELMPTYLKVSQQLRQAGLNVITNFEKRQLGKQFQAADKQGIRFCVIIGADEAAAQ---------KSSLKDLQSGEQVEVALADLAEEIKRRLT. 465
39 -17.4004h2w_A mol:protein length:346 Amino acid--[acyl-carrier-protein] ligase 1  ali model follow..  15  21.PNSPDTAPQIADPLDHLADKLFHSMGSDGVYARTALYESIVERLAALITS---HREAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVCGLHGTEREINAAVSRFDAGGDWTTS--------------------------------------------------------------SPADLVLSPAACYPVYPIAAS--RGPLPKGGLRFDVAADCFRRE--PSKHLDRLQSFRMREYVCIGTPDDVSDFRERWMVRAQAIARDLGLT---------------FRVDYASDPFFGRAGKMLANNQRDQQLKFELLIPLRSEEQPTACMSFNYHREHFGTTWGIQDANGEPAHTGCV--AFGMDRLAVAMFHTHGTDLSAWPAKVRDILGLQPHVAAGAHG....................................................................................................... 336
40 -17.3004g85_A mol:protein length:517 Histidine-tRNA ligase, cytoplasmic  ali model follow..  11  1..................................GPGSFELRRQMAER------AALEELVKLQGERVRGLKQQKAS------AELIEEEVAKLLKLKAQLGPDESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLM--GKYGEDSKLIYDLKDQGGELLSLRYDLTVPFARYLAM-----NKLTNIKRYHIAKVYRRD-NPAMTRGRYREFYQCDFDIAGNFDPMIPDAE-CLKIMCEILSSLQIGDFLVKVNDRVSDSKFRTICSSVDGDLKLLFEYLTLFGIDDKISFDLSLARGYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMSIGVERIFSIVEQRLEALEEKIRTTETQVL---------------VASAQKKLLEERLKLVSELWDAGIKAELLKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDG---------VIKLRSVTSREEVDVRREDLVEEIKRRTG. 514
41 -17.2003mey_A mol:protein length:346 Bll0957 protein  ali model follow..  15  21.PNSPDTAPQIADPLDHLADKLFHSMGSDGVYARTALYESIVERLAALITS---HREAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVCGLHG------------------------------------TEREINAAVSRFDAGGDWTTSLSPAD-------------------------LVLSPAACYPVYPIAAS--RGPLPKGGLRFDVAADCFRRE--PSKHLDRLQSFRMREYVCIGTPDDVSDFRERWMVRAQAIARDLGLT---------------FRVDYASDPFFGRVGQMKAVSQKQQQLKFELLIPLRSEEQPTACMSFNYHREHFGTTWGIQDANGEPAHTGCV--AFGMDRLAVAMFHTHGTDLSAWPAKVRDILGLQPHVAA........................................................................................................... 332
42 -17.1002el9_A mol:protein length:431 Histidyl-tRNA synthetase  ali model follow..  16  4.......................................................................................................YQDPMAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAG--IEHGLLYNQEQRLWYIGPMFRHE-RPQKG--RYRQFHQLGCEVFGLQGPDID--AELIMLTARWWRALGISEHTLELNSIGSLEEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQALLNDAPALGDYLDEESREHFAGLCKLLESAGIAYTDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLL-LVASGADTQSAAMALAERLRDEGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEVANG---------TAVVKDLRSGEQTAVAQDSVAAHLRTLLG. 431
43 -16.4005e3i_A mol:protein length:438 Histidine--tRNA ligase  ali model follow..  15  17..........................................................................................................................PTQTAAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRADATDIVEKEMYTDKGNPPESLTLRPEGTAGCVRAL--VEHNLLRGATPRVWYMGPMFRYE-KPQKG--RYRQFHQFGVETFGVATPDID--AELIMLTARLWKRMGVDDERTEYRNALVAFLNEHKDAL-DSQRRLTTNPLRILDSKIESTQKILENAPKLHDFLKEDSLSHFQQLQDYLTAAGIKFVDYYNKTVFEWTTTALGSQGTVCAGGRYDGLVGQGMERLLLLLEQVQAEIVRDCEAFLVAEPAYQSKALVLAEQLRDQLEAANSNGSQGSMKSQMKKADQAGAVYAIILGEREWEAQ---------QLAVKELATAEQSQVALAELVPFLIEKFT. 431
44 -16.3004g84_A mol:protein length:464 Histidine--tRNA ligase, cytoplasmic  ali model follow..  11  6.......................................................................................................FELRRQFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLM--GKYGEDSKLIYDLKDQGGELLSLRYDLTVPFARYLAM-----NKLTNIKRYHIAKVYRRD-NPAMTRGRYREFYQCDFDIAGNFDPMIPDAE-CLKIMCEILSSLQIGDFLVKVNDRVSDSKFRTICSSVD-DLKLLFEYLTLFGIDDKISFDLSLARGYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEAEEKIRTTETQVLVASA---QKKLLEERLKLVSELWDAGIKAELLKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDG---------VIKLRSVTSREEVDVRREDLVEEIKRRTG. 461
45 -16.1001v95_A mol:protein length:130 Nuclear receptor coactivator 5  ali model follow..  17  8.............................................................................................................................................................................................................................................................................................................................................................................................................PVDCSVIVVNKQT---KDYAESVGRKVRDLGMVVDLINTEVSLSQALEDVSRGGSPFAIVITQQHQIHRS--------TVNIMFGTPQEHRNMPQADAMVLVARNYE. 106
46 -15.5003w3s_A mol:protein length:527 Type-2 serine--tRNA ligase  ali model follow..  15  212............................RGQWIYTPPMAALFEVLRDFLLERVT-RKLGFEPALFPKLIPLETMFRMRYLHGLPDGMYYVCPPKRDPELFDDFKRELYVWGELNERTLGSLKEK------------------------------------------------------RDPGYVLAPAQCEPFYELLRDEV-VDPERLPIKLYDCGWTYRWEGGAAKGLERVNEFQRIEHVWIAEPEEAYRIRRELLEATKRVAEELELDPFYLEGRLLEDRDIELPDVPSYEFEVYLPFKGERSSEEAWISVGSFNVHGEHFVDG------------------FNVKEKSGRTLFTGCAGLGVTRWVVGLLAQ................................................................................................................................... 493
47 -15.4004e51_A mol:protein length:467 Histidine--tRNA ligase  ali model follow..  14  1......................................................................................MAMGTLEAQTQGPGSMTEQKRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTPLFTRGEVTDIVEKEMYSVDALNGENLTLRPENTAAVVRAA--IEHNMLYDGPKRLWYIGPMFRHE-RPQRG--RYRQFHQVGVEALGFAGPDAD--AEIVMMCQRLWEDLGLTGIKLEINSLGLAEEQHADKLDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPKLIDFLGDVSRAHFEGLQRLLKANNVPFTDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILEL-VVHQGDAAREQAFIVAERLRDTGLDVILDGAGASFKSQMKRADASGAAFAVIFGEDEVTNG---------TASVKPGEKSVQQSVPVESLTEFLINAMV. 453
48 -15.4002zni_A mol:protein length:308 Pyrrolysyl-tRNA synthetase  ali model follow..  13  5...........................SSGLVPRGSH-MFLTRRDPPLSSFWTKVQYQRLKELNASGEQLEMGFSDALSRDRAFQGIEHQLMSQGKRHLEQLRTVKHRPALLELEE------------------KLAKALHQQGFVQVVTPTIITKSALAKMTIGED--HPLFSQVFWLDGKKCLRPMLAPNLYTLWRELERLWDK--PIRIFEIGTCYRKESQGAQ---HLNEFTMLNLTEL---TPLEERHQRLEDMARWVLEAAGIREFELVTES................................................................................................................................................................................................................................... 227
49 -15.0002lw7_A mol:protein length:170 Histidine--tRNA ligase, cytoplasmic  ali model follow..  13  74.....................................................................................................................................................................................................................................................................................................................................................................................................................VASAQKKLLEERLKLVSELQDAGIKAELLKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDG---------VIKLRSVTSREEVDVRREDLVEEIKRRTG. 164
50 -13.8002dq3_A mol:protein length:425 Seryl-tRNA synthetase  ali model follow..  16  171............................................................................................................................GARLERALINFMLDLHTKKGYKEICPPHLVKPEILIGTGQLPKFEEDLY---KCERDNLYLIP-TAEVPLTNLYREEILKEENLPIYLTAYTPCYRREAGAYRGIIRQHQFDKVELVKIVHPDTSYDELEKLVKDAEEVLQLLGLP---YRVVELCTGDLGFSAAKTYDIEVWFP-KYREISSCSNCEDFQARR--------------------MNTRFKDSKTGKNRFVHTLNGSGLAVGRTLAAILENYQQED---------SVVVPEVLRDY.......................................................................................................... 416
51 -13.5005k1p_A mol:protein length:274 Pyrrolysine--tRNA ligase  ali model follow..  11  65........................................................................................................................................TRFFVDRGFLEIKSPILIPLEYIERMGI----DTELSKQIFRVDKNFCLRPMLAPNLYNYLRKLDRALPD--PIKIFEIGPCYRKESDGKE---HLEEFTMLAFAQMGSGCTREN----LESIITDFLNHLGIDFKIVGDSCMVYGDTLDVMHGDLEL................................................................................................................................................................................................................... 211
52 -13.3002dq0_A mol:protein length:455 Seryl-tRNA synthetase  ali model follow..  15  192............................................................................................................................IVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGSTSFEDFEDVIY---KVEDEDLYLIP-TAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIP---YRVVNICTGDLGYVAAKKYDIEAWMP-KFREVVSASNCTDWQARR--------------------LNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAILENHQEED---------TVRIPKVLWKY.......................................................................................................... 437
53 -13.0004cs2_A mol:protein length:274 PYRROLYSINE--TRNA LIGASE  ali model follow..  10  1...............................................................................MPALTKSLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMG------TELSKQIFRVDKNFCLRPMLAPNLANYLRKLDRALPD--PIKIFEIGPCYRKESDGKE---HLEEFTMLNFCQMGSGCTREN----LESIITDFLNHLGID........................................................................................................................................................................................................................................... 187
54 -12.8001ser_A mol:protein length:421 PROTEIN (SERYL-TRNA SYNTHETASE (E.C.6.1.1.11))  ali model follow..  14  165............................................................................................................................LALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVW---AIAETDLYLTG-TAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFRGLMRVHQFHKVEQYVLTEASLEASDFQELLENAEEILRLLELP---YRLVEVATGDMGPGKWRQVDIEVYLP-RYRETHSCSALLDWQARR---------------------ANLRYRDPEGRVRYAYTLNNTALATPRILAMLLENHQLQD---------RVRVPQALIPY.......................................................................................................... 411
55 -12.7003qtc_A mol:protein length:290 Pyrrolysyl-tRNA synthetase  ali model follow..  10  1........................................MKGGL-----------------VPRGSHGASAPALTKSQTDRLEVLLNPKDEISLN-SGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGI-----TELSKQIFRVDKNFCLRPMLTPNLYNYLRKLDRALPD--PIKIFEIGPCYRKESDGKE---HLEEFTMLVFWQMGSGCTREN----LESIITDFLNHLGID........................................................................................................................................................................................................................................... 201
56 -12.6001wle_A mol:protein length:501 Seryl-tRNA synthetase  ali model follow..  14  213.............................................................................................................................ALLQHGLVNFTLNKLIHRGFTPMTVPDLLRGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAETDEPWGLYRVHHFTKVEMFGVTGPEQSSELLEEFLSLQMEILTELGLH---FRVLDMPTQELGLPAYRKFDIEAWMP-RFGEVTSASNCTDFQSRR---------------------LHIMFQTEAGELQFAHTVNATGCAVPRLLIALLESYQQKD---------SVLVPPALQPY.......................................................................................................... 461
57 -12.4004bw9_A mol:protein length:291 PYRROLYSINE--TRNA LIGASE  ali model follow..  10  9..............................................................VPRGSHMASAPALTKSQTDRLEVLLNPKDEISLN-SGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGI-----TELSKQIFRVDKNFCLRPMLAPNLGNYLRKLDRALPD--PIKIFEIGPCYRKESDGKE---HLEEFTMLNFCQMGSGCTREN----LESIITDFLNHLGID........................................................................................................................................................................................................................................... 204
58 -12.4004q6g_A mol:protein length:267 Pyrrolysine--tRNA ligase  ali model follow..  13  25.................................................................................................SGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMG------TELSKQIFRVDKNFCLRPMVAPNIFNYARKLDRALPD--PIKIFEIGPCYRKESDGKE---HLEEFTMLNFFQMGSGCTREN----LESIITDFLNHLGIDFKIVG...................................................................................................................................................................................................................................... 191
59 -12.3003err_A mol:protein length:536 fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA synthetase from Thermus thermophilus  ali model follow..  14  275.............................................................................................................................ALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVW---AIAETDLYLTG-TAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFRGLMRVHQFHKVEQYVLTEASLEASDFQELLENAEEILRLLELP---YRLVEVATGDMGPGKWRQVDIEVYLP-RYRETHSCSALLDWQARR---------------------ANLRYRDPEGRVRYAYTLNNTALATPRILAMLLENHQLQD---------RVRVPQALIPY.......................................................................................................... 520
60 -12.2006blj_A mol:protein length:485 Serine-tRNA ligase  ali model follow..  14  215............................................................................................................................LVRMNLALQNYAIDFLAKKGYMPIYTPFFMTKEQMKKVAQLSQFDEELYTVTGEGEDKYLI---TSEQPIAAFHLEKRFDESELPIKYCGMSTCFRKEVGAHLGIFRVHQFEKIEQFVVTSPKDNKSWFDEMIGNSEAFYQSLGIP---YRVVNIVSGALNNAAAKKFDLEAWFP-EYRELVSCSNCTDYQTRR-------------------EVKYGKSKKQGSEVEFCHMLNSTLTATSRTLCCIVENYQTPE----------VNVPEVLQPY.......................................................................................................... 468
61 -12.1003lsq_A mol:protein length:484 Seryl-tRNA synthetase  ali model follow..  16  207............................................................................................................................LVQLQVALVSYSLDFLVKRGYTPFYPPFFLNRDVMGEVAQLS--FDEELYQVSGDGDKKYLIA-TSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGAHLGIFRVHQFDKIEQFVVCRQEESWRHLEDMITTSEEFNKSLGLP---YRVVNICSGALNNAAAKKYDLEAWFP-AFRELVSCSNCTDYQSQS----------------NCRYGPNLRGTAAQNVKEYCHMLNGTLCAITRTMCCICENYQTEE----------VVIPDVLRPY.......................................................................................................... 460
62 -12.1003vbb_A mol:protein length:522 Seryl-tRNA synthetase, cytoplasmic  ali model follow..  16  201.............................................................................................................................VFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKSDDNSYDEKYLIA-TSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHRGIFRVHQFEKIEQFVYSSPNKSWEMFEEMITTAEEFYQSLGIP---YHIVNIVSGSLNHAASKKLDLEAWFP-AFRELVSCSNCTDYQARR-------------------RIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEK----------ITVPEKLKEFLQELIPFVKPAPIEQEPSKK--QKKQHEGSKKKAAARDVTLENRLQNME......................................................... 510
63 -12.0003od1_A mol:protein length:400 ATP phosphoribosyltransferase regulatory subunit  ali model follow..  10  2.......................................................................................................NAMSKPFMFEKPFGMRDTLPEWYKTKKNICDQMTEEINLWGYDMIETPTLEYYETVGVVS--AILDQQLFKLLDQQGNTLVLRPDMTAPIARLVAS--SLKDRAYPLRLAYQSNVYRAQQNEGG---KPAEFEQLGVELIGDGTASAD--GEVIALMIAALKRAGLSEFKVAIGHVNEQRADRLRRFLYEKNYVGYREHVKSLNLSTIDKSRLMNLLSLRGGRAAIEEARGLIQTEKGKTALAEMTKSYYTGVVFE-SGGRYDELLSKFHRPAQATGFGVRIDLLVEALNGEIISNGHEQT-CILFSNERRFEAIELARKKRANGEAVVLQDLAGVTDVDAMSSNYQDVIYCIGTAGRGGEDA....................................... 400
64 -11.8004tqd_A mol:protein length:291 Pyrrolysine--tRNA ligase  ali model follow..  11  1....................................MGSSSSGLVPRG---SHMASAPALTKSQTDRLE-NPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLERE------------------ITRFFVDRGFLEIKSPILIPLEYIERMG------TELSKQIFRVDKNFCLRPMLAPNLYNYLRKLDRALPD--PIKIFEIGPCYRKESDGKE---HLEEFTMLSFIQMGSGCTREN----LESIITDFLNHLGIDFKIVGDSCMVYGDTLDVMHGDLEL................................................................................................................................................................................................................... 228
65 -11.7002e3c_A mol:protein length:291 Pyrrolysyl-tRNA synthetase  ali model follow..  12  80......................................................................................................................................EITRFFVDRGFLEIKSPILIPLEYIERMG------TELSKQIFRVDKNFCLRPMLAPNLYNYLRKLDRALPD--PIKIFEIGPCYRKESDGKE---HLEEFTMLNFCQMGSGCTREN----LESIITDFLNHLGIDFKIVGDSCMVYGD.............................................................................................................................................................................................................................. 217
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.