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Query: 1b70_A mol:protein length:350 PHENYLALANYL-TRNA SYNTHETASE, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLEEALAAIQNARDLEELKALKARYLGKKGLLTQEMKGLSALPLEERRKRGQELNAIKAALEAALEAREKALEEAALKEALERERVDVSLPGASLFSGGLHPITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPMQVRYMVAHTPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGEGIAMAHLKGAIYELAQALFGPDSKVRFQPVYFPFVEPGAQFAVWWPEGGKWLELGGAGMVHPKVFQAVDAYRERLGLPPAYRGVTGFAFGLGVERLAMLRYGIPDIRYFFGGRLKFLEQFKGVLLast
1 -134.0001b70_A mol:protein length:350 PHENYLALANYL-TRNA SYNTHETASE  ali model  100  1MLEEALAAIQNARDLEELKALKARYLGKKGLLTQEMKGLSALPLEERRKRGQELNAIKAALEAALEAREKALEEAALKEALERERVDVSLPGASLFSGGLHPITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPMQVRYMVAHTPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGEGIAMAHLKGAIYELAQALFGPDSKVRFQPVYFPFVEPGAQFAVWWPEGGKWLELGGAGMVHPKVFQAVDAYRERLGLPPAYRGVTGFAFGLGVERLAMLRYGIPDIRYFFGGRLKFLEQFKGVL 350
2 -118.0003pco_A mol:protein length:327 Phenylalanyl-tRNA synthetase, alpha subunit  ali model follow..  47  7LVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTTLRELPPEERPAAGAVINEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIENGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFDTTR---------------LLRTQTSGVQIRTMKAQQPPIRIIAPG-RVYRNDYDQTHTPMFHQMEGLIVDTNISFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNG-KWLEVLGCGMVHPNVLRNVGIDPE---------VYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK... 327
3 -114.0004p71_C mol:protein length:338 Phenylalanine--tRNA ligase alpha subunit  ali model follow..  48  7LVSQALEAVRHTEDVNALEQIRVHYLGKKGELTQVMKTLGDLPAEERPKVGALINVAKEKVQDVLNARKTELEGAALAARLAAERIDVTLPGRGQLSGGLHPVTRTLERIEQCFSRIGYEVAEGPEVEDDYHNFEALNIPGHHPARAMHDTFYFNANM---------------LLRTHTSPVQVRTMESQQPPIRIVCPGRVYRCDS-DLTHSPMFHQVEGLLVDEGVSFADLKGTIEEFLRAFFEKQLEVRFRPSFFPFTEPSAEVDIQCVICTGWLEVMGCGMVHPNVLRMSNIDPE---------KFQGFAFGMGAERLAMLRYGVNDLRLFFDNDLRFLGQFR... 338
4 -106.0003l4g_A mol:protein length:508 Phenylalanyl-tRNA synthetase alpha chain  ali model follow..  24  125VFRVVDSMEDEVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVTLKTYWVSKGSAFSTSISKQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPSQGYKYNWKLDEARKNLLRTHTTSASARALYRPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVADHGLTLGHLMGVLREFFTKLGITQL--RFKPAYNPYTEPSMEVFSYHQGLKKWVEVGNSGVFRPEMLLPMGLPEN----------VSVIAWGLSLERPTMIKYGINNIRELVGHKVNLQMVYDSPL 492
5 -102.0002rhq_A mol:protein length:294 Phenylalanyl-tRNA synthetase alpha chain  ali model follow..  41  1.................................................MGSSSSGLVPRGSHMGTELMEKLN-----QQLAEETIDVTLPSRQISIGSKHPLTRTVEEIEDLFLGLGYEIVDGYEVEQDYYNFEALNLPKSHPARDMQDSFYITDEI---------------LMRTHTSPVQARTMEKRNGPVKIICPGKVYRRDSDDATHSHQFTQIEGLVVDKNIKMSDLKGTLELVAKKLFGADREIRLRPSYFPFTEPSVEVDVSCFKCTGWIEILGAGMVHPNVLEMAGFDSN---------EYSGFAFGMGPDRIAMLKYGIEDIRYFYTNDVRFLEQFKA.. 282
6 -75.3005x6c_A mol:protein length:553 O-phosphoserine--tRNA(Cys) ligase  ali model follow..  16  35...RETRALIKDKHIDNKYPRLKPVYGKPHPVMETIERLRQAYLRMGFEEMINPVIVDE--MEIYKQFGPEAMAVLDRCFYLAGLPRPDVGLGNEKVEIIKNLGIDIDEEKKERLREVLHLYKKGAIDGDFEIAKALNVSNEMGLKVLETAFPE--------FKDLKPESTTLTLRSHMTSGWFITLKKRKLPLKLFSIDRCFRREQEDRSHLMSYHSASCVVVGEDVSVDDGKVVAEGLLAQFGFTKFKFKPDEKKSKYYTPETQTEVYAPKLGEWIEVATFGVYSPIALAKYNID------------VPVMNLGLGVERLAMIIYGYEDVRAMVYPQFYEYRLSDRDI 369
7 -73.5002du3_A mol:protein length:534 O-phosphoseryl-tRNA synthetase  ali model follow..  17  25.......EILAERSPNELYPRVGFSFGKEHPLFATIQRLREAYLSIGSEVVNPLIVEDVHVKKQFGREALAVLDRCFYLATLPKPNVGISAEKIRQIEAITKREVDSKPLQEIFHRYKKGEIDGDDLS--YLIAEVLDVDDITAVKILDEVFPE--------FKELKPISSTLTLRSHMTTGWFITLSKLPLPIKLFSIDRCFRREQEDATRLYTYFSASCVLVDEELSVDDGKAVAEALLRQFGFENFRFRKDEKRSKYYIPDTQTEVFAFHPDGWIEIATFGIYSPTALAEYDIP------------YPVMNLGLGVERLAMILYGYDDVRKMVYPQIHGEIKLSD.. 359
8 -59.9003cmq_A mol:protein length:415 Phenylalanyl-tRNA synthetase, mitochondrial  ali model follow..  28  3....................................................AECATQRAPGSVVELLGKSYPQDDHSN---LTRKVLTRVGRNLHNQQHHPLWLIKERVKEHFYKQYVGRFGTPPVVTTWQNFDSLLIPADHPSRKKGDNYYLNRT---------------HMLRAHTSAHQWDLLHA--GLDAFLVVGDVYRRDQIDSQHYPIFHQLEAVRLAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFPFTHPSFEMEINFH--GEWLEVLGCGVMEQQLVNSAGAQDRI-----------GWAFGLGLERLAMILYDIPDIRLFWCEDERFLKQFC... 308
9 -57.9004q6g_A mol:protein length:267 Pyrrolysine--tRNA ligase  ali model follow..  13  1...............................................PALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKSPILIPL-EYIERMGIDNDTELSKQIFRV-----------------DKNFCLRPMVAPNIFNYARKLPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFFQMGSGCTRENLESIITDFLNHLGIDFK--IVGDSCSVYGDTLDVMH-------GDLELSSAVVGPIPLDREWGIDK------------PWIGAGFGLERLLKVKHDFKNIKRAARSESYY........ 260
10 -56.7004tqd_A mol:protein length:291 Pyrrolysine--tRNA ligase  ali model follow..  13  2...........................................................................GSSSSGLVPRGSHMASAPALTKSQTDRLEVLLNPKDEISLNSGFRELESELLSRRKKDLQQIYAEERENEREITRFFVMGIDNDTELSKQIFRVDKNFCLRPMLAPNLYNYLRKLPDPIKIFEIGPCYRKESDGKEHLEEFTMLSFIQMGSGCTRENLESIITDFLNHLGIDFK--IVGDSCMVYGDTLDVM-------HGDLELSSAVVGPIPLDREWGIDK------------PWIGAGFGLERLLKVKHDFKNIKRAARSESYY........ 278
11 -54.2005k1p_A mol:protein length:274 Pyrrolysine--tRNA ligase  ali model follow..  13  2...............................................PALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKSPILIPLEY-IERMGIDNDTELSKQIFRV-----------------DKNFCLRPMLAPNLYNYLRKLPDPIKIFEIGPCYRKESDGKEHLEEFTMLAFAQMGSGCTRENLESIITDFLNHLGIDFK--IVGDSCMVYGDTLDVMH-------GDLELSSAVVGPIPLDREWGIDKP------------WIGAGFGLERLLKVKHDFKNIKRAARSESYY........ 261
12 -46.2002e3c_A mol:protein length:291 Pyrrolysyl-tRNA synthetase  ali model follow..  13  2...........................................................................GSSSSGLVPRGSHMASAPALTKSQTDRLEVLLNPKDEISLNSGFRELESELLSRRKKDLQQIYAEERENYLEITRFFVDRGDNDTELSKQIFRVDKNFCLRPMLAPNLYNYLRKLPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLESIITDFLNHLGIDFK--IVGDSCMVYGDTLDVM-------HGDLELSSAVVGPIPLDREWGIDKPWI------------GAGFGLERLLKVKHDFKNIKRAARSGSYY........ 278
13 -34.7004cs2_A mol:protein length:274 PYRROLYSINE--TRNA LIGASE  ali model follow..  16  1...................................MPALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQI-----------YAEERENYLGKLEREITRFFVDRGFLEIKSPILI-----------PLEYIERMGIDN-------DTELSKQIFRVDKNFCLRPMLAPNLANYLRKLPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLESIITDFLNHLGIDFK--IVGDSCMVFGDTLDVM-------HGDLELSSAVVGPIPLDREWGIDKPWI------------GAGFGLERLLKVKHDFKNIKRAARS-ESYYNGISTNL 268
14 -34.1004bw9_A mol:protein length:291 PYRROLYSINE--TRNA LIGASE  ali model follow..  16  8.........................LVPRGSHMASAPALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQI-----------YAEERENYLGKLEREITRFFVDRGFLEIKSPILI-----------PLEYIERMGIDN-------DTELSKQIFRVDKNFCLRPMLAPNLGNYLRKLPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLESIITDFLNHL---GIDFKIVGDSCMVFGDTLDV------MHGDLELSSAVVGPRPLDREWGIDKPW------------IGAGFGLERLLKVKHDFKNIKRAARSES-YYNGISTNL 285
15 -33.5003qtc_A mol:protein length:290 Pyrrolysyl-tRNA synthetase  ali model follow..  16  2...........................KGGLVPRSAPALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQI-----------YAEERENYLGKLEREITRFFVDRGFLEIKSPILIPL---IERMGIDNDTELSKQIFRV-----------------DKNFCLRPMLTPNLYNYLRKLPDPIKIFEIGPCYRKESDGKEHLEEFTMLVFWQMGSGCTRENLESIITDFLNHLGIDFKIV--GDSCMVFGDTLDVM-------HGDLELSSALVGPIPLDREWGIDKPWI------------GAGFGLERLLKVKHDFKNIKRA-ARSESYYNGISTNL 282
16 -25.0002zni_A mol:protein length:308 Pyrrolysyl-tRNA synthetase  ali model follow..  14  13.......................SHMFLTRRDPPLSSFWTKVQYQRLKELNASGEQLEMGFSDALSRDRAFQGIEHQLMSQGKRHLEQLRTVKHRPA-----LLELEEKLAKALHQQGFVQVVTPTIITKS--LAKMTIGEDHPLFSQVFWL-----------------DGKKCLRPMLAPLWRELERLWDKPIRIFEIGTCYRKESQGAQHLNEFTMLNLTELGTPLEHQRLEDMARWVLEAAGIREFELV--------TESSVVYGDTVDVMKGDLELASGAMGPHFLDEKWEIFDP------------WVGLGFGLERLLMIREGTQHVQSMARS............ 290
17 -15.5003p8t_A mol:protein length:294 AsnS-like asparaginyl-tRNA synthetase related protein  ali model follow..  15  19.......................................................................................................TKILDYMTKFFTDRGFKWLLPIMLSP------ITDPLWPDPAGEGIRPAEVDVYGVRMRLTHSMILHKQLAIAMGLE--------------KIFVLSPNIRLESRDGRHSYEFTQLDFEIE---AKMKDVMRLIEELIYGLFRKAEEVNIPREFYDREENGVWKNYDLILPYGYGEVSSGGE--VAKIRAAGLKEDSFRPYLEIARAGKLGAGIGVERLVRFIVGAKHIAEV............... 281
18 -15.2001nnh_A mol:protein length:294 asparaginyl-tRNA synthetase-related peptide  ali model follow..  13  19.......................................................................................................TKILEYMTDFFVKEGFKWLLPVIISPITDPLWP------DPAGEGMEPAEVEIYGVKMRLTHSMILHKQLAIAMGLK--------------KIFVLSPNIRLESRQKRHAYEFTQLDFEVE---AKMEDIMRLIERLVYGLFRKAEEINIPREFYDREVDGFWRNYDLILPYGYGEVASGGE--VAKIRKAGLNEDSFRPYLEIAKAGKLGAGIGVERLVRFIVGAKHIAEV............... 281
19 -13.4003mey_A mol:protein length:346 Bll0957 protein  ali model follow..  11  1...............................MGSSSSGLVPRGSHMNIAVLPNSPDTAPQIADPLDHLADK------------LFHSMGSDGVYARTALYESIVERLAALITSHREAGTEALRFPPVMSRLKSFPNLLGCVCGLHGTEREINAAVSRFDAGGDWTTSLSPADLVLSPPVYPIAASRGPLPKGGLRFDVAADCFRREPSHLDRLQSFRMREYVCIGTPDDVSDFRERWMVRAQAIARDGLTFRVDYASDPFQQLKFELLIPLRSEEQPTACMSFNYHREHFGTTWGIQDA------NGEPAHTGCVAFGMDRLAVA------FHTHGTDLSAWPAKVRDIL 324
20 -13.3004h2w_A mol:protein length:346 Amino acid--[acyl-carrier-protein] ligase 1  ali model follow..  11  23.................................................................SPDTAPQIADPLDHLADKLFHSMGSDGVYARTALYESIVERLAALITSHREAGTEALRFPPVMSRLKSFPNLLGCVCGLHGTEREINAAVSRFDAGGDWTTSLSPADLVLSPPVYPIAASRGPLPKGGLRFDVAADCFRREP-HLDRLQSFRMREYVCIGTPDDVSDFRERWMVRAQAIARDGLTFRVDYASDPFQQLKFELLIPLRSEEQPTACMSFNYHREHFGTTWGIQDA------NGEPAHTGCVAFGMDRLAVA------FHTHGTDLSAWPAKVRDIL 324
21 -13.2003l4g_B mol:protein length:589 Phenylalanyl-tRNA synthetase beta chain  ali model follow..  12  311.....ADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIE--------IPPTRADIIHACDIVEDAAIAYG------YNNIQMTLP-KTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDI-----SATKAVHISNPK----------TAEFQVARTTLLPGLLKTIAKMPLPLKLFEISDIVIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPKGGYVIKASEGPAFFPGRCAEIFARGQ----SVGKLGVLHPDVITKFEL------------TMPCSSLEINIGPFL........................... 589
22 -13.2004j15_A mol:protein length:521 Aspartate--tRNA ligase, cytoplasmic  ali model follow..  11  105VAVGDHASKQMVKFAANINK---SIVDVEGVVRKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEGRATVNQDTRLDNRVIDLRTS-SGICHLFRETLINKGFVEIQTPKIISA-------------ASEGGANVFTVSYFKNNAYLAQSPQLYKQMCICADFE--------------KVFSIGPVFRAEDSNTRHLTEFVGLD-IEMAFNYHYHEVMEEIADTMVQIILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQ---RIHDPQLLTERALHHGIDLEKIKAYGGGIGLERVTMLFLGLHNVRQT............... 503
23 -12.8005xix_A mol:protein length:472 Asparagine--tRNA ligase, cytoplasmic  ali model follow..  11  67.LRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGENMSK--LKARSMVTRCFRDHFFDRGYYEVTPPTLVQT-------------QVEGGATLFKLDYFGEEAFLTQSSQLYLETCLPALG---------------DVFCIAQSYRAEQSRTRHLAEYTHVEAECP---LTFDDLLNRLEDLVCDVLLCRFPVEIKSFYMSRLTESVDVLM-----PNVGEIVGGSM--LAGYKREGIDPTPYYWYTDQRKYGT-GYGLGLERFLTWILNRYHIRDV............... 454
24 -12.8001wyd_A mol:protein length:429 hypothetical aspartyl-tRNA synthetase  ali model follow..  11  38ILRDKTGLGQVVVDKNSSAFGISQELTQESVIQVRGIVKADKRAPRGIELHAEEITLLSKAKAPLPLDVSGKVKADIDTRLRERVLDLRRQEMQ---AVIKIQSLALKAFRETLYKEGFIEIFTPKIIAS-------------ATEGGAQLFPVIYFGKEAFLAQSPQLYKELMAGVVE---------------RVFEVAPAWRAEESDTPHLAEFISMDVEMA---ADYNDVMQLLEKILHNIFIVDWPSDARPFYTKSKSENPELSESFDLIYKFLEIVSGST--EEALKKKGLKPESFEFFLKWFDYGM-GFGMGLARLMVMLTGIQSVKEI............... 417
25 -12.7003m4p_A mol:protein length:456 Asparaginyl-tRNA synthetase, putative  ali model follow..  12  62...QCVIFGKELCEPEKVKLLTRCSLEITGRLNAYAGKNHPPEIADILNLEMQVTEWKVIGESPIDLENIINKDSSIPQKMQNRHIVIRSEHTQ---QVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKT-------------QCEGGSTLFKLQYFNEPAYLTQSSQLYLESVIASLG---------------KSFCMLSSYRAEQSRTVHLAEYLHLEAELP---ISFEDLLNHLEDLVCTVFMIHFPSKMKAFYMPDLTESVDLLM-----PGVGEIVGGSM--MGAYKANGLNPDPYYWYTQQRKYGS-GYGLGVERLVMWLLGEDHIRKV............... 444
26 -12.5003i7f_A mol:protein length:548 Aspartyl-tRNA synthetase  ali model follow..  11  248.......................................................................................................SACCGLFREFLTSQKFVEIHTPKLIGC-------------SSEGGSNIFEVKYFDRKAYLAQSPQLYKQMAIMGDFR--------------KVFEVGPVFRAENSNTRHLTEFEGLD-IEMEIVENYHECIDVMEKLFTFIILDKFPAAIRPFYTMPDIDDPNYSNSYDVFVRGQEITSGAQ---RIHDPEFLMKRCIEKGVDPATLKDYGCGIGLERITMLYLGIPNIRKV............... 536
27 -12.5001b8a_A mol:protein length:438 PROTEIN (ASPARTYL-TRNA SYNTHETASE)  ali model follow..  11  67..........RSEDVVAVEGVVNFTPKAKLGFEILPEKIVVLNRAETPLPLDPTGKVKAELDTRLNNRFMDLRRPEVMAIFKIR-------------------SSVFKAVRDFFHENGFIEIHTPKIIAT-------------ATEGGTELFPMKYFEEDAFLAESPQLYKEIMMASGLD--------------RVYEIAPIFRAEEHNTTHLNEAWSIDAFIEDEEEVMSFLERLVAHAINYVREHQYPSEAKPFYIMKYDNKPEICRAFDLEYRGVEISSGGQ--VEQIKEKGLNPESFEFYLKAFRYGM-GFGLGAERLIKQMLDLPNIREV............... 426
28 -12.3003g1z_A mol:protein length:326 Putative lysyl-tRNA synthetase  ali model follow..  16  21.......................................................................................................AAIMAEIRRFFADRGVLEVETPCMSQA---------TVTDIHLFPFETRFVGPGH---------SQGINLYLMTSPEYHMKRLLAAGCG--PVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHYDMYMNEVDDLLQQVLDCQPAESLSYQLQLLFTMGVEPGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLGVALGVDRLVMLALGAESLADVI.............. 319
29 -12.3002xti_A mol:protein length:437 ASPARAGINYL-TRNA SYNTHETASE, CYTOPLASMIC, PUTATIVE  ali model follow..  13  36ILRDGTGFLQVLLMDKLCQTYDALTVNTECTVEIYGAIKEVPEGKEAPNGHELIADFWKIIGNAPPGGIDNVLNEEASVDKMLDNRHLVIRGENAAA--LRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGGSTLFNLDYFGEQS----FLT-------------QSSQLYLETCIPTLG-----------DVFCIAQSYRAEKSRTRHLAEYAHVEAECP---ITLDDLMEKIEELVCDTLLNRFPSEIKAFYMNTLTESVDLLM-----PGVGEIVGGSM--SKAFKNVEIDPKPYYWYLDQRLYGT-GYGLGLERFICWLTNTNHIRDV............... 425
30 -12.1001asy_A mol:protein length:490 ASPARTYL-tRNA SYNTHETASE  ali model follow..  12  73LVKANKEGTISKNMVKWAGSLNLEIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAAGLPVVNLDTRLDYRVIDLRTV-AGVCELFREYLATKKFTEVHTPKLLGA-------------PSEGGSSVFEVTYFKGKAYLAQSPQFNKQQLIVADFE--------------RVYEIGPVFRAENSNTHHMTEFTGLDMEMAFEE-HYHEVLDTLSELFVFIILDKFPLEIRPFYTMPDPANPKYSNSYDFFMRGEEILSGAQ--QERMKAHGLSPDGFSYGCPPHA----GGGIGLERVVMFYLDLKNIRRA............... 478
31 -12.1001x54_A mol:protein length:434 Asparaginyl-tRNA synthetase  ali model follow..  11  38WIRDSTGIVQAVVAKNVVGEETFEKAKK--GRESSVIVEGIVKADERAPGGAEVHVEKLEVIQAVSEFPIPENPEQASPELLLDYRHLHIRTPKASA--MKVKETLIMAAREWLLKDGWHEVFPPILVTG-------------AVEGGATLFKLKYFDKYAYLSQSAQLYLEAAIFGLE---------------KVWSLTPSFRAEKSRTRHLTEFWHLELEAA---MDLWDIMKVEEELVSYMVQRTLEYGYPKHIKAFNDPRKVLASDMLAPEGYGEIIGGSQ--LNRILEEGMDPKDYEWYLDLRRYGS-GFGLGVERLVAWVLKLDHIRWA............... 422
32 -12.1005vl1_A mol:protein length:506 Lysine--tRNA ligase  ali model follow..  16  82LQDGDGTQLQAMISLDEVGRESLDRWKADVDIGDVVYVHGTVISSRRGELSVLADSWRM-AAKALRPLPVAHKEMSEESRVRQRYVDLIVRPQAREVARQR--IAVIRAVRNALERRGFLEVETPMLQTLAGGAAARPFVTHSNALDI-----------------------DLYLRIAPELFLKRCIVGGFD--RVFELNRVFRNEGSDSTHSPEFSMLETYQTTYDDSALITRELIQEVADEAIGTRQLSMPDGSVYDIDGEDVEIDNSVFGHGKLVEELWEHAVGNKLTAPTFVKDFPVETTPLTRQHRS-GTGMGIDRLLMCLTGIRETVLF............... 492
33 -11.9006aqh_A mol:protein length:508 Lysine--tRNA ligase  ali model follow..  17  85LQEGDGTQLQAMISLAEVGQEALDNWKTYVDIGDIVFVHGEVITSKRGELSVLADSWQM-AAKALRPLPVAHKEMSEESRVRQRYVDLIVRDQARKVARQR--IAVMRAIRSALERRGFLEVETPMLQTLAGGAAARPFVTHSNALDT-----------------------ELYLRIAPELFLKRCLVGGFE--RVFELNRVFRNEGADSTHSPEFVMLEGEEITPDTPAETLWAIADRLVEELWEHTVGAKLAPTFFP-TTPLTRSHRSIPGVTEKWDLYVRRIFEAQARAAAAGDDEAMALDEDFLAALEYGTGMGIDRLMMTLTG-LSIRETV.............. 494
34 -11.8003a5y_A mol:protein length:345 Putative lysyl-tRNA synthetase  ali model follow..  17  34.......................................................................................................AAIMAEIRRFFADRGVLEVETPCMSQA---------TVTDIHLVPFETRFVGPGH---------SQGMNLWLMTSPEYHMKRLLVAGCG--PVFQLCRSFRNEEMGRYHNPEFTMLEWYRP--HYDMYRLMNEVDDLLQQVLDCPAAESLKPTFFP-QASLAQISTEDHRVAERFEVYYKGIGFHELTDAREQQQRFEQDNRKRAA-DCSGVALGVDRLVMLALGAETLAEVI.............. 332
35 -11.5001e1o_A mol:protein length:504 LYSYL-TRNA SYNTHETASE, HEAT INDUCIBLE  ali model follow..  15  87.LQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVR--SKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDL-----------------------DMYLRIAPELYLKRLVVGGFE--RVFEINRNFRNEGISVRHNPEFTMMELYMAYAD--YHDLIELTESLFRTLAQETTKVTYGEHVFDFGKPFEKLTMR-WGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDV-GLGIGIDRMIMLFTNSHTIRDVI.............. 495
36 -11.4001bbu_A mol:protein length:504 PROTEIN (LYSYL-TRNA SYNTHETASE)  ali model follow..  15  87.LQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVR--SQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDL-----------------------DMYLRIAPELYLKRLVVGGFE--RVFEINRNFRNEGISVRHNPEFTMMELYMAYAD--YKDLIELTESLFRTLAQDKTEVTYGDVTLDFGKPFEKLTMR-WGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDV-GLGIGIDRMVMLFTNSHTIRDVI.............. 495
37 -11.2001qe0_A mol:protein length:420 Histidine--tRNA ligase  ali model follow..  15  20.......................................................................................................RYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEM--------------YTFKDKGDRSITLRPEGTAAVVRSYIEHKQPIKLYYNGPMFRYERKQKGRYRQFNQVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLKLVIRKEY--YTHTAFELMMDNPNYDGAITTLCGGGRYNGLLELLD-----------GPSETGIGFALSIERLLLA......................... 316
38 -11.2001n9w_A mol:protein length:422 aspartyl-tRNA synthetase 2  ali model follow..  12  36LRDRSGVVQVVTGGLKLPLPESALRVRGLVVENAKAPGGLEVQAKEVEVLSPALEPTPVEIPKEEWRANPDTLLEYRYVTLRGEKARAPLKVQ----------AALVRGFRRYLDRQDFTEIFTPKVVRA-------------GAEGGSGLFGVDYFEKRAYLAQSPQLYKQIMVGVFE---------------RVYEVAPVWRMEHHTSRHLNEYLSLDGFIADEEDLMRLEEALLAEMLEEAFVTRYPRSVRPFYTYPEEDGTTRSFDLLFRGLEITSGGQRIHRYEELKAKGMDPEAFHGYLEVFKYGM-GFAIGAERLTQKLLGLPNVRYA............... 410
39 -11.1004g85_A mol:protein length:517 Histidine-tRNA ligase, cytoplasmic  ali model follow..  14  10.......................RQMAERAALEELVKLQGERVRGLKQQ-----KASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELK----ETLMGKYGEDSKLI--------------YDLKDQGGELLSLRYDLTVPFARYLAMNKLNIKRYHIAKVYRRDNPAMTRYREFYQCDFDIAGNFDPMAECLKIMCEILSSLQIGDFLVKVN................................................................................................ 223
40 -11.0003ica_A mol:protein length:213 Phenylalanyl-tRNA synthetase beta chain  ali model follow..  11  1.................................................................................................SNADRRYKWQTVVSEQLVGAGFN-------EILNNSLTAGSYYEGLKSHPREMAVELMNP-----------SQELNCMRQTLLFGGLETLSRKHLSLYLFEWGKCYRAKRTDETPLAAYAEDDRLGIEEPTSVFELKAVVEQVLCRVGIETGAYTLKTAD-NDLYASAMEVKTRSGK----LLGTFGTVSTELIKRFEIEQPV------------YFAELLWDALM........................... 213
41 -10.9003a74_A mol:protein length:493 Lysyl-tRNA synthetase  ali model follow..  17  95VGEQQYELFKISDLGDIVGVRGTMFKTKVGELSIKVSSYEFLTKALRPLPEKYHG---KDIEQRYRQRYLDLIMNPESKKTFITR------------------SLIIQSMRRYLDSHGYLEVETPMMHAVAGGAAARPFITHHNALDM-----------------------TLYMRIAIELHLKRLIVGGLE--KVYEIGRVFRNEGISTRHNPEFTMLEGVDFWRQMSDEEARELAKEIVNEFFEQKVEDKLQPTFHP-ISPLAKKNPDDPRFTDRFELFIVGRFEEQLKEREQGNDEAHEMDEDFLEALEYGLGIGVDRLVMLLTNSPSIRDVL.............. 485
42 -10.8004ycv_A mol:protein length:516 Lysine--tRNA ligase  ali model follow..  16  79.LVGDGEKIQVLANYSFHNHEKGNFAECYDKIRDIVGIVGFPGKSKKGELSIFPKETIL-LSACLHMLPMKYGLKDTEIRYRQRYLDLLINESSRHTFVTR--TKIINFLRNFLNERGFFEVETPMMNLIAGGANARPFITHHNDLDL-----------------------DLYLRIATELPLKMLIVGGID--KVYEIGKVFRNEGIDNTHNPEFTSCEFYWA---ADYNDLIKWSEDFFSQLVYHENKYNDKPFFHP-MSPLAKYHRTKPGLTERLEMFICGKFKLQQKDREKGDTEAAQLDSAFCTSLEYGLGLGIDRITMFLTNKNSIKDVI.............. 499
43 -10.7003ig2_A mol:protein length:213 Phenylalanyl-tRNA synthetase beta chain  ali model follow..  11  1.................................................................................................SNADKSNKLQNLVAEQLVGCGFN-------EILNNSLTRAAYYDGLESYPSKNLVMLLNP-----------SADLNCMRQTLLFGGLESIARKNADLKFFEFGNCYHFDAEKKNPEKEDYHLGLWVTGENTSVYELKAYVENIFKRLGLDLHSL-VVGNLSDDIYSTALTVNTKGGK----RLATFGVVTKKMLKAFDVDNEV------------YYADLNWKELM........................... 213
44 -10.7004ex5_A mol:protein length:529 Lysine--tRNA ligase  ali model follow..  15  119VGAETYDAFKKWDLGDIVAARGVLFRTNKGELSVKCTQLRLLAKALRPLPDKFHG---ADQETRYRQRYVDLIVTPETRTTFRAR------------------TKAIASIRKFMGDADFMEVETPMLHPIPGGAAAKPFVTHHNALDM-----------------------EMFLRIAPELYLKRLIVGGFE--RVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTD--YRWLMDFTERLIRQAAVDTATIQYQGRELDLAQPFHRLTIT-AGIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-GCGIGIDRLVMLLTDSPTIRDVL.............. 514
45 -10.6005eln_A mol:protein length:535 Lysine--tRNA ligase  ali model follow..  14  96.......QIIANIMEHDISTGEFSVSHSEIRRGDVVGFTGFPGKSKRGELSLFSKSVVLLSPCYHMLPTAISGLKDQEVRYRQRYLDLMLNEESRKVFKLR--SRAIKYIRNYFDRLGFLEVETPMLNMIYGGAAARPFITYHNELET-----------------------QLYMRIAPELYLKQLIVGGLD--KVYEIGKNFRNEGIDLTHNPEFTAMEFYMA---ADYYDLMDLTEELISGLVGKCIEIDFTTPWHP-MSPLAKWHREKPEMTERFELFVLGKFEQQADAKASGDVEACPIDETFCLALEHGWGLGIDRLIMFLADKNNIKEVI.............. 508
46 -10.4003bju_A mol:protein length:521 Lysyl-tRNA synthetase  ali model follow..  14  112.......................DIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGL------------KDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDM-----------------------NLYMRIAPELYHKMLVVGGID--RVYEIGRQFRNEGIDLTHNPEFTTCEFYMA---ADYHDLMEITEKMVSGMVGQAYDVDFTPPFHP-MSPLAKWHRSKEGLTERFELFVMKKFEEQAKAKAAGDDEAMFIDENFCTALEYGWGMGIDRVAMFLTDSNNIKEVL.............. 500
47 -10.4005hgq_A mol:protein length:524 Lysine--tRNA ligase  ali model follow..  17  39.LADFIAKYNSLEKDVILNDIVQSVAGRVFSKRESGGKLIFYDLHGEGTRLQVLANARFHSGDEAFDNLHDRIKNGYPARSKSGELSIIPYEIIQLTPCLHMLSRMISFLRRYLDNLGFLEVETPMMNLIAGGATAKPFITHHNDLDM-----------------------DLYLRVAPELYLKMLVVGGID--RVYEIGRVFRNEGIDQTHNPEFTSCEFYMA---ADYEDLMKITEDMLAKLIGEFLEPTFSPTFHP-MSPLAKWHRSIPGLTERFELFVVTKFDEQAKQKQAGDDEAQNIDENYCTALEYGWGMGIDRLAMILTDSNNIKEVL.............. 503
48 -10.3001z7m_A mol:protein length:344 ATP phosphoribosyltransferase regulatory subunit  ali model follow..  13  4.........................................................................SGSIEGRMEKINYLLPEESAEMTLNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEY----TQLYTALESNGKTFNQEKMF----------QFIKHEGQSITLRYDFTLPLVRLYSQIKTSARYSYFGKIFRKEKRHKGRSTENYQIELFGESADKSELEILSLALQVIEQLGLNKTVFEI................................................................................................. 173
49 -10.2003net_A mol:protein length:465 Histidyl-tRNA synthetase  ali model follow..  18  30.......................................................................................................LYLLDTIRRVYESYGFTPIETPAVERL----EVLQAKGNQGDNIIYGLEPILPPNRQAEDKSGDTGSEARALKFDQTVPLAAYIARHLNPFARYQMDVVFRGERAKDGRFRQFRQCDIDVVGRELYDAQMPAIITEIFEAVNIGDFVIRIN................................................................................................ 185
50 -10.2004rdx_A mol:protein length:423 Histidine--tRNA ligase  ali model follow..  20  23.......................................................................................................QRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEM--------------FTFQDRGGRSLTLRPEGTAAMVRAMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQYEALGSENPILDAEAVVLLYECLKELGLRRLKVKLS................................................................................................ 166
51 -10.2004lns_A mol:protein length:351 Asparagine synthetase a  ali model follow..  12  12..................................................................................................LQEQILTVKRSFSEALEKLNLVEVRAPILFRVGDGTQDNLSGFEKAV----QVPVKAIPNASFEVVHSLAKWKRRTLANYKFA-------------GLYTHMTALRVDDLDNIHSVVVDQWD-VMKDDQRNLAFLKEVVCKVYAAIRKTELAVCTMNSLSSLKGLNGDILLYNPTLDDSLEVSSMGILRHQISLTGDDSLLKSEWHQQLLNGQTVGGGIGQSRMVMFMLRKKHIGEVQCS............ 338
52 -10.2003od1_A mol:protein length:400 ATP phosphoribosyltransferase regulatory subunit  ali model follow..  17  28.......................................................................................................KNICDQMTEEINLWGYDMIETPTLE----YYETVGVVSAILDQQL--------------FKLLDQQGNTLVLRPDMTAPIARLVASSAYPLRLAYQSNVYRAQQNEGGKPAEFEQVELIGDGTASADGEVIALMIAALKRAGLSEFKVAI................................................................................................. 165
53 -10.0006chd_A mol:protein length:597 Lysine--tRNA ligase  ali model follow..  15  180.......................DIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGL----------KDKETRYRQRYLDLILNDFVRQKFIIR--SKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDM-----------------------NLYMRIAPELYHKMLVVGGID--RVYEIGRQFRNEGIDLTHNPEFTTCEFYMA---ADYHDLMEITEKMVSGMVGQAYDVDFTPPFHP-MSPLAKWHRSKEGLTERFELFVMKKFEEQAKAKAAGDDEAMFIDENFCTALEYGWGMGIDRVAMFLTDSNNIKEVL.............. 568
54 -10.00011as_A mol:protein length:330 ASPARAGINE SYNTHETASE  ali model follow..  15  8..................................................................................................KQRQISFVKSHFSRQLEELGLIEVQAPILSRVGDGTQDNLSGAEKAV----QVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSA------------GLYTHMKALRPDELSPLHSVYVDQWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEE-DYDDWSTPNGDILVWNPVLEDAFELSSMGILKHQLALTGDEDRLELEWHQALLRGQTIGGGIGQSRLTMLLLQLPHIGQVQAG............ 316
55 -9.8304e51_A mol:protein length:467 Histidine--tRNA ligase  ali model follow..  15  7..................................................................EAQTQGPGSMTEQKRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTPLFTRGIGEVTDIVEKEMYS---------------DALNGENLTLRPENTAAVVRAAIEHNGPKRLWYIGPMFRHERPQRGRYRQFHQVEALGFAGPDADAEIVMMCQRLWEDLGLTGIKLEIRAAH--YNLTVFEWVT--DKLGAQGTVAAGGRY------------DPLIEQLGGKPTAACGWAMGIERILEL......................... 336
56 -9.7403hri_A mol:protein length:456 Histidyl-tRNA synthetase  ali model follow..  14  41.......................................................................................................KYLFDVFHSTARKFGFEEYDSPVLES-------EELYIRKAGEEITEQMF----------NFITKGGHRVALRPEMTPSLARQLLAKGRPAKWYSIPQCWRYEAITRGRRREHYQMDIIGVKSVSSEVELVCAACTAMQSLGLSSKDVGVKINSRKILQTVVEQ---------------AGVSADKFAPVCVIVDKMEKLPREEVVAQLAAIGLESNVVDAIT-TIDEIAQRIGEEHEAVRELRDFI 266
57 -9.7302cim_A mol:protein length:522 SERYL-TRNA SYNTHETASE  ali model follow..  10  133.IKSMENIEGGIQLELEVGEAEMKNRVPDRILTLLEEKIEAAQYGAKAEHWNLLWQREPMEHPFKEDPTQAMMKEGWLKRGSSRGQWIHGP----------QSARIFRTFEKIVLEE-----------LEPLGYREMIFPKLVTWEVWMKSGHAKGHEVPTKLIKEKIAEPIGGMCYAQMYVAGETLPNEEIPVKVFDRGTSHRYES-GIERVDEFHRIEIVWIGTK-CAEELHDRYMHIFNDILDIEWRKARVTPWF--TVGTTDYEACLPYRGEWLEFQNVSINGDKYPKGFNVKLQ------SGDELWSGCSGVGLERWALAQKGLD.................... 494
58 -9.7103hrk_A mol:protein length:456 Histidyl-tRNA synthetase  ali model follow..  13  41.......................................................................................................RHLFDVFHATAKTFGFEEYDAPVLES-------EELYIRKAGEEITEQMF----------NFITKGGHRVALRPEMTPSLARLLLGKGRPAKWYSIPQCWRYEAITRGRRREHYQMDIVGVKSVSAEVELVCAACWAMRSLGLSSKDVGIK................................................................................................ 180
59 -9.6803w3s_A mol:protein length:527 Type-2 serine--tRNA ligase  ali model follow..  11  118.YVGYVPVADDVVVEDGTVRLTFQDVDEEMLRRHVIDRVIRLVAWAVEERSELVERVTKVEPGTVVDESGP-RRIRFRGDVTEEARRRGWVKEFPGRGQWPPMAALFEVLRDFLLER-----------TRKLGFEPALFPKLIPLETMFRMRYLHGNERTLGSLKEKLRDPGYVLAPAQELLRDEVVDPERLPIKLYDCGWTYRWEG-GLERVNEFQRIEHVWIAEPEEAYRIRRELLEATKRVAEEELEWKVVVSDDPFDVPSYEFEVYLPFKGERSSEEAWISVGSFNVHGEHFVDGFNVKEKSGRTLFTGCAGLGVTRWVLAQHGFYP................... 498
60 -9.6203rac_A mol:protein length:373 Histidine-tRNA ligase  ali model follow..  15  1.................................................................SNAMNGTRSAWGARAWEAVRGFADRPPQDGYPDFAKRRRAVETRLLSFVEDAGYEPVTSGLFE----YVDTLLRARSPESSRDWIRLF-------------DGGGDAVALRPEMTPSIARMAAPRRTPIRWCYCERVYRRTDDPASLSWESTQVGIERIGEEASVMDVLRLLHEASAAAGVRHHRIVV................................................................................................. 186
61 -9.5004up7_A mol:protein length:777 LYSINE--TRNA LIGASE  ali model follow..  12  85...QIMLNKSAYENKEDFVSLTK--MIYRGDICGFTGHPTRTKTGELSLIPISGMILSPCLHML-----PSMHYGLGDQETRFRKRYLDLIVNPESVKNFVLRTKVVKAVRKYLDDKGFLEVETPILNTIPGGATA---PFITHHNQLDIQMYMR----------APELYLKELV-------------------RVYEIGRLFRNEGIDQTHNPEFTTCE-AYADYNDIMKMTEELLGNMVKDITGGSTKLEIKDRLMDINNEEDIKML................................................................................. 320
62 -9.3704g84_A mol:protein length:464 Histidine--tRNA ligase, cytoplasmic  ali model follow..  16  32.......................................................................................................EKVFDVIIRCFKRHGAEVIDTPVFELK----ETLMGKYGEDSKLI--------------YDLKDQGGELLSLRYDLTVPFARYLAMNKLNIKRYHIAKVYRRDNPAMTRYREFYQCDFDIAGNFDPMAECLKIMCEILSSLQIGDFLVKVN................................................................................................ 170
63 -9.3305e3i_A mol:protein length:438 Histidine--tRNA ligase  ali model follow..  18  24.......................................................................................................RRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEM------------YTFFDKGNPPESLTLRPEGTAGCVRALVEHNATPRVWYMGPMFRYEKPQKGRYRQFHQVETFGVATPDIDAELIMLTARLWKRMGVDHIKFVINQKL--YNKTVFEWTTTALGSQGTVCAGGR---YDGLVGQLK--------GKADQSVPAVGFAMGMERLLLL......................... 321
64 -9.2502el9_A mol:protein length:431 Histidyl-tRNA synthetase  ali model follow..  15  1..........................................................................GPGYQDPMAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEM--------------YTFEDRNGDSLTLRPEGTAGCVRAGIEHGQEQRLWYIGPMFRHERPQKGRYRQFHQCEVFGLQGPDIDAELIMLTARWWRALGISEIAYTVNQRLV-YNRTVFEW--VTNSLGSQGTVCAGGRY------------DGLVEQLGGRATPAVGFAMGLERLVLL......................... 322
65 -9.0701efw_A mol:protein length:580 ASPARTYL-TRNA SYNTHETASE  ali model follow..  16  52.........PASPAYATAERVRPEWVRAKGLVRLRPEPNPRLATGRVEVELSALEVLAEAKTPPFP-RGEEEKEASEELRLKYRYLDLRRRRMQ---ENLRLRHRVIKAIWDFLDREGFVQVETP----------FLTKSTPEGARD----FLVPY-----------RHEPGLFYALPQSPQLFKQMLMVAGLDRYFQIARCFRDEDLRADRQPDFTQLD-------VEVEDVLELNERLMAHVFREALGVELPLPFPRLSYEEA..................................................................................... 282
66 -9.0501wu7_A mol:protein length:434 Histidyl-tRNA synthetase  ali model follow..  15  24.......................................................................................................KFIFKTAEEAAEAFGFRRIDFPSLEY-------LDLYRIKSGEELLQQTY----------SFVDKGGREVTLIPEATPSTVRMVTSRKDPLRWYSFPKVWRYEEPQAGRYREHYQADIFGSDSPEADAEVIALASSILDRLGLQD...................................................................................................... 156

FFAS is supported by the NIH grant R01-GM087218-01
1 2 7 7 0 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Osterman A, Overbeek R, Godzik A. Automatic detection of subsystem/pathway variants in genome analysis. Bioinformatics. 2005 Jun 1;21 Suppl 1:i478-i486.