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Query: 2du3_A mol:protein length:534 O-phosphoseryl-tRNA synthetase, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKFDPQKYRELAEKDFEAAWKAGKEILAERSPNELYPRVGFSFGKEHPLFATIQRLREAYLSIGFSEVVNPLIVEDVHVKKQFGREALAVLDRCFYLATLPKPNVGISAEKIRQIEAITKREVDSKPLQEIFHRYKKGEIDGDDLSYLIAEVLDVDDITAVKILDEVFPEFKELKPISSTLTLRSHMTTGWFITLSHIADKLPLPIKLFSIDRCFRREQGEDATRLYTYFSASCVLVDEELSVDDGKAVAEALLRQFGFENFRFRKDEKRSKYYIPDTQTEVFAFHPKLVGSSTKYSDGWIEIATFGIYSPTALAEYDIPYPVMNLGLGVERLAMILYGYDDVRKMVYPQIHGEIKLSDLDIAREIKVKEVPQTAVGLKIAQSIVETAEKHASEPSPCSFLAFEGEMMGRNVRVYVVEEEENTKLCGPAYANEVVVYKGDIYGIPKTKKWRSFFEEGVPTGIRYIDGFAYYAARKVEEAAMREQEEVKVKARIVENLSDINLYIHENVRRYILWKKGKIDVRGPLFVTVKAEIELast
1 -165.0002du3_A mol:protein length:534 O-phosphoseryl-tRNA synthetase  ali model  100  1MKFDPQKYRELAEKDFEAAWKAGKEILAERSPNELYPRVGFSFGKEHPLFATIQRLREAYLSIGFSEVVNPLIVEDVHVKKQFGREALAVLDRCFYLATLPKPNVGISAEKIRQIEAITKREVDSKPLQEIFHRYKKGEIDGDDLSYLIAEVLDVDDITAVKILDEVFPEFKELKPISSTLTLRSHMTTGWFITLSHIADKLPLPIKLFSIDRCFRREQGEDATRLYTYFSASCVLVDEELSVDDGKAVAEALLRQFGFENFRFRKDEKRSKYYIPDTQTEVFAFHPKLVGSSTKYSDGWIEIATFGIYSPTALAEYDIPYPVMNLGLGVERLAMILYGYDDVRKMVYPQIHGEIKLSDLDIAREIKVKEVPQTAVGLKIAQSIVETAEKHASEPSPCSFLAFEGEMMGRNVRVYVVEEEENTKLCGPAYANEVVVYKGDIYGIPKTKKWRSFFEEGVPTGIRYIDGFAYYAARKVEEAAMREQEEVKVKARIVENLSDINLYIHENVRRYILWKKGKIDVRGPLFVTVKAEIE 534
2 -138.0005x6c_A mol:protein length:553 O-phosphoserine--tRNA(Cys) ligase  ali model follow..  49  15MRFDIKKVLELAEKDFETAWRETRALIKDKHIDNKYPRLKPVYGKPHPVMETIERLRQAYLRMGFEEMINPVIVDEMEIYKQFGPEAMAVLDRCFYLAGLPRPD---VGLGNEKVEIIKNLGIDIDEEKKERLREVLHLYKKGAIDFEIAKALNVSNEMGLKVLETAFPEFKDLKPESTTLTLRSHMTSGWFITLSSLIKKRKLPLKLFSIDRCFRREQREDRSHLMSYHSASCVVVGEDVSVDDGKVVAEGLLAQFGFTKFKFKPDEKKSKYYTPETQTEVY--------AYHPKLGEWIEVATFGVYSPIALAKYNIDVPVMNLGLGVERLAMIIYGYEDVRAMVYPQFYEYRLS-DRDIAGMIRVDKVPILDEFYNFANELIDICIANKDKESPCSVEVFNFNGERRVIKVEIFENEPNKKLLGPSVLNEVYVYDGNIYGIPPTFELKKAKEEGVSTNIRYIDGIIYKLVAKIEEALVSNVDEFKFRVPIVRSLSDINLKIDELALKQIMGENKVIDVRGPVFLNAKVEIK 553
3 -76.2002rhq_A mol:protein length:294 Phenylalanyl-tRNA synthetase alpha chain  ali model follow..  20  1MGSSSSGLVPRGSHMGTELMEKLNQQLAEETIDVTLPSRQISIGSKHPLTRTVEEIEDLFLGLGYEIVDGYEVEQDYY----------------------------------------------------------------------NFEALNLPKSHPARDMQDSFY-------ITDEILMRTHTSPVQARTMEK--RNGQGPVKIICPGKVYRRDS-DDATHSHQFTQIEGLVVDKNIKMSDLKGTLELVAKKLFGADREIRLRPSYFPFTEPSVEVDVSCFKCKGKGCNVCKHTGWIEILGAGMVHPNVLEMAGFDYSGFAFGMGPDRIAMLKYGIEDIRYFYTNDVRFLEQFKAVEDRG.......................................................................................................................................................................... 287
4 -73.5001b70_A mol:protein length:350 PHENYLALANYL-TRNA SYNTHETASE  ali model follow..  17  8........................AIQNARDLEELKALKARYLGKKGLLTQEMKGLSALPLEER-RKRGQELNAIKAALEAALEAREKALEEAALKEALERERVDVSLPGASLFSGGLHPITLMERELVEIFRALGYQAVEGPEVEFFNFDALNIPEHHPARDMWDTFWLGPLGEEVEGRLLLRTHTSPMQVRYMV----AHTPPFRIVVPGRVFRFEQ-TDATHEAVFHQLEGLVVGEGIAMAHLKGAIYELAQALFGPDSKVRFQPVYFPFVEPGAQFAVWWPEG----------GKWLELGGAGMVHPKVFQAVDAYVTGFAFGLGVERLAMLRYGIPDIRYFFGGRLKFLEQFKG............................................................................................................................................................................... 348
5 -71.8004p71_C mol:protein length:338 Phenylalanine--tRNA ligase alpha subunit  ali model follow..  17  2..ENLDALVSQALEAVRHT----------EDVNALEQIRVHYLGKKGELTQVMKTLGDLPAEER-PKVGALINVAKEKVQDVLNARKTELEGAALAARLAAERIDVTLPGRGQLSGGLHPVTRTLERIEQCFSRIGYEVAEGPEVEYHNFEALNIPGHHPARAMHDTFY-------FNANMLLRTHTSPVQVRTM----ESQQPPIRIVCPGRVYRCD--SDLTHSPMFHQVEGLLVDEGVSFADLKGTIEEFLRAFFEKQLEVRFRPSFFPFTEPSAEVDIQCVICSGNGCRVCKQTGWLEVMGCGMVHPNVLRMSNIDFQGFAFGMGAERLAMLRYGVNDLRLFFDNDLRFLGQFR................................................................................................................................................................................ 338
6 -71.6003l4g_A mol:protein length:508 Phenylalanyl-tRNA synthetase alpha chain  ali model follow..  21  180.AFSTSISKQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPT----------DNFIESSFWNFDALFQ-----------------------PQQHPARDQHDTFFLRDPAEALQLPMDYVQ----RVKRTHSQGGYGSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAKKPFTPVKYFSIDRVFRNE-TLDATHLAEFHQIEGVVADHGLTLGHLMGVLREFFTKLGIT--QLRFKPAYNPYTEPSMEVFSY----------HQGLKKWVEVGNSGVFRPEMLLPMGLNVSVIAWGLSLERPTMIKYGINNIRELVGHKVNLQMVYD-SPLCRLDAEPRPPPTQEA............................................................................................................................................................. 507
7 -70.8003pco_A mol:protein length:327 Phenylalanyl-tRNA synthetase, alpha subunit  ali model follow..  16  2..SHLAELVASAKAAISQA----------SDVAALDNVRVEYLGKKGHLTLQMTTLRELPPEER-PAAGAVINEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIENGGLHPVTRTIDRIESFFGELGFTVATGPEIEYHNFDALNIPGHHPARADHDTFW-------FDTTRLLRTQTSGVQIRTM----KAQQPPIRIIAPGRVYR--NDYDQTHTPMFHQMEGLIVDTNISFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMG-----------KNGKWLEVLGCGMVHPNVLRNVGIDYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK................................................................................................................................................................................ 327
8 -49.3004tqd_A mol:protein length:291 Pyrrolysine--tRNA ligase  ali model follow..  16  2.....................GSSSSGLVPRGSHMASAPALTKSQTDRLEVLLNPKDEISLNSGFRELESELLSRRKKDLQQIYAEE-----------------------------RENYLGKLEREITRFFVDRGFLEIKSPILIPEYIERMGIDNDTEL---------SKQIFRVDKNFCLRPMLAPNLYNYLRKLDRALPDPIKIFEIGPCYRKE-SDGKEHLEEFTMLSFIQMGSGCTRENLESIITDFLNHLGIDFK--IVGDSCMVYGDTLDVM-----------------HGDLELSSAVVGPIPLDREWGIDKPWIGAGFGLERLLKVKHDFKNIKRAARSESYY..................................................................................................................................................................................... 278
9 -46.6003cmq_A mol:protein length:415 Phenylalanyl-tRNA synthetase, mitochondrial  ali model follow..  12  9.....RAPGSVVELLGKSYPQDDHS--NLTRKVLTRVGRNLHNQQHHPLWLIKERVKEHFYKQYVGRFGTPLFSV-------------------------------------------------------------YDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYY-------LNRTHMLRAHTSAHQWDLLHA------GLDAFLVVGDVYRRDQ-IDSQHYPIFHQLEAVRLAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFPFTHPSFEMEINF------------HGEWLEVLGCGVMEQQLVNSAGAQDRGWAFGLGLERLAMILYDIPDIRLFWCEDERFLKQFCINQKVKFQPLSKYPAVINDISFWLP--------SENYAENDFYDLVRTIGGDLVEVDLIDKFVHPKT-HKTSHCYRITYRHMERTLSQREALQEAAVQLLGVEGRF...................................................................... 415
10 -45.7004q6g_A mol:protein length:267 Pyrrolysine--tRNA ligase  ali model follow..  15  3LTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKYAEERENYLGKLEREITRFFVDRGFLEIKSPILIPL-----------------------------------------------------------------------EYIERMGIDNDTELSKQIFRV---------DKNFCLRPMVAPNIFNYARKLDRALPDPIKIFEIGPCYRKES-DGKEHLEEFTMLNFFQMGSGCTRENLESIITDFLNHLGIDFK--IVGDSCSVYGDTLDVMH-----------------GDLELSSAVVGPIPLDREWGIDKPWIGAGFGLERLLKVKHDFKNIKRAARSESYY..................................................................................................................................................................................... 260
11 -42.8005k1p_A mol:protein length:274 Pyrrolysine--tRNA ligase  ali model follow..  14  4LTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKYAEERENYLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIF--------------------------------------------------------------------------------RVDKNFCLRPMLAPNLYNYLRKLDRALPDPIKIFEIGPCYRKE-SDGKEHLEEFTMLAFAQMGSGCTRENLESIITDFLNHLGIDFK--IVGDSCMVYGDTLDVMH-----------------GDLELSSAVVGPIPLDREWGIDKPWIGAGFGLERLLKVKHDFKNIKRAARSESYY..................................................................................................................................................................................... 261
12 -40.9002e3c_A mol:protein length:291 Pyrrolysyl-tRNA synthetase  ali model follow..  15  2.....................GSSSSGLVPRGSHMASAPALTKSQTDRLEVLLNPKDEISLNSGFRELESELLSRRKKDLQQIYAEE-----------------------------RENYLGKLEREITRFFVDRGFLEIKSP--------ILIPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLYNYLRKLDRALPDPIKIFEIGPCYRKE-SDGKEHLEEFTMLNFCQMGSGCTRENLESIITDFLNHLGIDFK--IVGDSCMVYGDT-----------------LDVMHGDLELSSAVVGPIPLDREWGIDKPWIGAGFGLERLLKVKHDFKNIKRAARSGSYY..................................................................................................................................................................................... 278
13 -29.0004cs2_A mol:protein length:274 PYRROLYSINE--TRNA LIGASE  ali model follow..  15  4LTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKYAEERENYLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIF--------------------------------------------------------------------------------RVDKNFCLRPMLAPNLANYLRKLDRALPDPIKIFEIGPCYRKESD-GKEHLEEFTMLNFCQMGSGCTRENLESIITDFLNHLG-------------------IDFKIVGDSCMVFGDTLDVMHGDLELSSAVVGPIPLDREWGIDKPWIGAGFGLERLLKVKHDFKNIKRA............................................................................................................................................................................................ 254
14 -28.5004bw9_A mol:protein length:291 PYRROLYSINE--TRNA LIGASE  ali model follow..  16  63.............................................................................................................QQIYAEERENYLGKLEREITRFFVDRGFLEIKSP--------ILIPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLGNYLRKLDRALPDPIKIFEIGPCYRKE-SDGKEHLEEFTMLNFCQMGSGCTRENLESIITDFLNHLG-------------------IDFKIVGDSCMVFGDTLDVMHGDLELSSAVVGPRPLDREWGIDKPWIGAGFGLERLLKVKHDFKNIKRAARSES....................................................................................................................................................................................... 276
15 -27.6003qtc_A mol:protein length:290 Pyrrolysyl-tRNA synthetase  ali model follow..  13  3.................................................GGLVPRGSHGASAPALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDL---QQIYAEERENYLGKLEREITRFFVDRGFLEIKSP--------ILIPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLTPNLYNYLRKLDRALPDPIKIFEIGPCYRKES-DGKEHLEEFTMLVFWQMGSGCTRENLESIITDFLNHLG-------------------IDFKIVGDSCMVFGDTLDVMHGDLELSSALVGPIPLDREWGIDKPWIGAGFGLERLLKVKHDFKNIKRAARSESYY..................................................................................................................................................................................... 275
16 -20.0002zni_A mol:protein length:308 Pyrrolysyl-tRNA synthetase  ali model follow..  19  88.........................................................................................................................LELEEKLAKALHQQGFVQVVTP--------TIITKSALAKMTIGEDHPLFSQVFWLDGKKCLRPMLAPNLYTLWRELERLWDKPIRIFEIGTCYRKE-SQGAQHLNEFTMLNLTELGTPLEHQRLEDMARWVLEAAGIREFELVTESS------------------VVYGDTVDVMKGDLELASGAMGPHFLDEKWEIFDPWVGLGFGLERLLMIREGTQHVQSMARSLS....................................................................................................................................................................................... 292
17 -12.0003p8t_A mol:protein length:294 AsnS-like asparaginyl-tRNA synthetase related protein  ali model follow..  13  15.....................................................................................................................IDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRPAEVDVYGVRMRLTHSMILHKQLAIAMG----------------KIFVLSPNIRLESRRKDDHSYEFTQLDFEIE---AKMKDVMRLIEELIYGLFRKAEEVNIPREFYDREENGVEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSA-----------GAGIGVERLVRFIVGAKHIAEVQ........................................................................................................................................................................................... 282
18 -11.7003l4g_B mol:protein length:589 Phenylalanyl-tRNA synthetase beta chain  ali model follow..  14  285.........EAAEVVFPNGKSHTFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVED---AAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHI------NPKTAEFQVARTTLLPGLLKTIAA-NRKMPLPLKLFEISDIVIKDSNTD-VGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPKGGYVIKASEGPAFFPGRCAEIFA--------------RGQSVGKLGVLHPDVITKFELTMPCSSLEINIGPFL........................................................................................................................................................................................................ 589
19 -11.6001nnh_A mol:protein length:294 asparaginyl-tRNA synthetase-related peptide  ali model follow..  12  15.....................................................................................................................LDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGEGMEPAEVEIYGVKMRLTHSMILHKQLAIAMG----------------KIFVLSPNIRLESRQKDDHAYEFTQLDFEVE---AKMEDIMRLIERLVYGLFRKAEEINIPREFYDREVDGFEYEKIVAKIRKAGLNEDSFRPYLEIAKAGKLKPSA-----------GAGIGVERLVRFIVGAKHIAEV............................................................................................................................................................................................ 281
20 -11.5003ica_A mol:protein length:213 Phenylalanyl-tRNA synthetase beta chain  ali model follow..  21  56.................................................................................................................................................................................QELNCMRQTLLFGGLETLSHNLRRKHLSLYLFEWGKCYRAAKRTDETPLAAYAEDDRLGIEEPTSVFELKAVVEQVLCRVGIETGAYTLKTAD-NDLYASAMEVKTR--------------SGKLLGTFGTVSTELIKRFEIEQPVYFAELLWDALM........................................................................................................................................................................................................ 213
21 -11.4003ig2_A mol:protein length:213 Phenylalanyl-tRNA synthetase beta chain  ali model follow..  17  56.................................................................................................................................................................................ADLNCMRQTLLFGGLESIAHNANRKNADLKFFEFGNCYHFDAEKKNPEKVLAPYSEDYHLDENTSVYELKAYVENIFKRLGLDLHSL-VVGNLSDDIYSTALTVNTK--------------GGKRLATFGVVTKKMLKAFDVDNEVYYADLNWKELM........................................................................................................................................................................................................ 213
22 -11.3003mey_A mol:protein length:346 Bll0957 protein  ali model follow..  11  13.SHMNIAVLPNSPDTAPQIADPLDHLADKLFHSMGSDGVYARTALYESIVERLAALITSHREAGTEALRFPPVMSRAQLEKS-----------------------GYLKSFPNLLGCVCGLHGTEREINAAVSRFDAGGDWTTSLS-------------------------------PADLVLSPAACYPVYPIAASRGPLPKGGLRFDVAADCFRREPSKHLDRLQSFRMREYVCIGTPDDVSDFRERWMVRAQAIARDGLTFRVDYASDPFFGRVGQMKAVSQKQQQL-IPLRSEEQPTACMSFNYHREHFGTTWGIQDA--CVAFGMDRLAFHTHGTDKVRDILGLQ........................................................................................................................................................................................ 327
23 -11.2004h2w_A mol:protein length:346 Amino acid--[acyl-carrier-protein] ligase 1  ali model follow..  12  13.SHMNIAVLPNSPDTAPQIADPLDHLADKLFHSMGSDGVYARTALYESIVERLAALITSHREAGTEALRFPPVMSRA------------QLEKSGYLKSFPN-----------LLGCVCGLHGTEREINAAVSRFDAGGDWTTSLS-------------------------------PADLVLSPAACYPVYPIAASRGPLPKGGLRFDVAADCFRREPSKHLDRLQSFRMREYVCIGTPDDVSDFRERWMVRAQAIARDGLTFRVDYASDPFFGRAGKMLANNQRDQQL-IPLRSEEQPTACMSFNYHREHFGTTWGIQDA--CVAFGMDRLAFHTHGTDKVRDILGLQ........................................................................................................................................................................................ 327
24 -9.8703hri_A mol:protein length:456 Histidyl-tRNA synthetase  ali model follow..  13  41.........................................................................................................................KYLFDVFHSTARKFGFEEYDSPVLESEELYIRKAGEEITEQ-------MFNFITKGGHRVALRPEMTPSLARQLLAKGRSLLLPAKWYSIPQCWRYEAI-TRGRRREHYQWNMDIIGVKSVSSELVCAACTAMQSLGLSSKDVG-----------------------------------VKINSRKILQTVV-----------QAGVSADKFAPVCVIVDKMEKLPREEVV-AIGLESNVVDAITSTLSLKTIDEIAQRIGEEHEAVRELRDFITQIEAYGFGDWVIFDASVVRGLAYYTGIALCGGGRYDNLLTTYGSPTAVPC----------GFGFGDCVIVELLNEKKLLPELVIPFDETMRPHALSILRRLRDAGRSADVFDKKKVVQAFNYADRIGALRAVLVAPDE 416
25 -9.8304up7_A mol:protein length:777 LYSINE--TRNA LIGASE  ali model follow..  13  174.....................................................................................................................FVLRTKVVKAVRKYLDDKGFLEVETPILNTIPGGATARPFITHHNQLDIQMY-------------MRIAPELYLKELVVGGIN------RVYEIGRLFR-NEGIDQTHNPEFTTCE-AYADYNDIMKMTEELLGNMVKDITGGSTKLEIKDDQPQLMSPLAKFELFILKREIANAYTELNEVFLDAIEHAF--P----------PTGGWGLGIDRLAMLLADVDNIKEVIAATEEKGGKKVVKPKANKQQPVKEVLDGFQLEIRVGKIVEAGPHPNSEHLLALKVDVGEEKPRSVVAGLAEHYKPEELLNQKATFVCNLKPSKLRGVASEAMILAATSLD-GTKVKFCEGKVTISAKKISIDVV-GKMNLALKGGLVRT-NDVPLIVKDTELTVTVDE-----IDGTV......... 770
26 -9.8104g85_A mol:protein length:517 Histidine-tRNA ligase, cytoplasmic  ali model follow..  11  12..........................................MAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPKGTRDYSPRQMAVREKV------FDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKL--------IYDLKDQGGELLSLRYDLTVPFARYL---AMNKLTNIKRYHIAKVYRRDNAMTRGRYREFYQCDFDIAGNFDPMAECLKIMCEILSSLQIGDFLVKVNDR---------GMFAICGVSDSKFRTICSSVDKLDKVSWEEVKNEMVGEKGLAPEVAD----IGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCGVERIFSTETQVLVASAQKKVSELWDAGIKAELLYKKNLQYCEEAGIPLVAIIGEQELKIKLRSVTSREEVDVRREDLVEEIKRRTGQPL............... 517
27 -9.7203i7f_A mol:protein length:548 Aspartyl-tRNA synthetase  ali model follow..  15  244.....................................................................................................................FRIQSACCGLFREFLTSQKFVEIHTPKL-------IGCSSEGGSNIFEVKYFDRKAYLAQSPQLYKQMAIMGD----------------KVFEVGPVFRAENSNTRRHLTEFEGLDIEMEIVE-NYHECIDVMEKLFTFIILDKFPAAIRPFYYDVFVRGQEIEFLMKRCIEKGVDPATLKDYIESFRFGS--PH------------GCGIGLERITMLYLGIPNIRKVT........................................................................................................................................................................................... 537
28 -9.6503hrk_A mol:protein length:456 Histidyl-tRNA synthetase  ali model follow..  14  41.........................................................................................................................RHLFDVFHATAKTFGFEEYDAPVLESEELYIRKAGEEITEQ-------MFNFITKGGHRVALRPEMTPSLARLLLGKGRSLLLPAKWYSIPQCWRYEAI-TRGRRREHYQWNMDIVGVKSVSAELVCAACWAMRSLGLSSKDVG-----------------------------------IKVNSRKVLQTVV-----------QAGVTSDKFAPVCVIVDKMEKIPREEVEAQLAVLGLEPTVVDAITTTLSLKSIDEIAQRVGEEHEAVKELRQFFEQVEAYGYGDWVLFDASVVREGKFRALCGGGRYDNLLTTYGSPTPIPC----------GFGFGDCVIVELLQEKRLLPDIVIPFDESMRPHALAVLRRLRDAGRSADILDKKKVVQAFNYADRVGAVRAVLVAPEE 416
29 -9.6003od1_A mol:protein length:400 ATP phosphoribosyltransferase regulatory subunit  ali model follow..  11  28.........................................................................................................................KNICDQMTEEINLWGYDMIETPTLEY--YETVGVVSAILDQQL------FKLLDQQGNTLVLRPDMTAPIARLVASSLKDRAYPLRLAYQSNVYRAQQN-EGGKPAEFEQLGVELIGDGTASADVIALMIAALKRAGLSEFK-------------------------------------VAIGHVGYVNALL-----------DVVGNEQRADRLRRFLYEKNYV---GYREHVKSLNLSTIDKSRLMNLLSLRGGRAAIEEARGLIQTEKGKTALAEMTKLYEVLESYGASEYVK--------FDLTLVLHMSYYTGVVFEGYGNRLGVPLCSGGRYDEL---PAQATGFGVRIDLLVEASNERRFEAIELARKKRANGEAVVQDLAGVTDVDAMSSNYQDVIYCIGTAGRG 396
30 -9.6004e51_A mol:protein length:467 Histidine--tRNA ligase  ali model follow..  10  44.........................................................................................................................EFFEATVKSLLRAYGYQNIRTPIVEHTPLFTRGIGEV--TDIVEKEMYSFV-DALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERP-QRGRYRQFHQVEALGFAGPDADAEIVMMCQRLWEDLGLTGIKLEINPKLIDFINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEEHLVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASFKSQMKRADASGAAFAV-----------------IFGEDEVTN------GTASVKPLRGTGDDGEKSVQQSVP-VESLTEFLINAMVATAEDGDD................................................. 461
31 -9.5103rac_A mol:protein length:373 Histidine-tRNA ligase  ali model follow..  11  41.........................................................................................................................RAVETRLLSFVEDAGYEPVTSGLFEYVDTLLRARSPESSRD-------WIRLFDGGGDAVALRPEMTPSIARMAAPRVAAGRTPIRWCYCERVYRRTDSWASGKAAESTQVGIERIGEEASVDDVLRLLHEASAAAGVRHHR-------------------------------------IVVSHARLVPRLL-----------ALGISASLSRAFLACLTSGNYVQFRELWQLHAAKDVDLLANLLTWSPAERDAAKRSREASDRELEALLRDAVDPRAAADVRDAWRYLCRLAEALHDSGLATFDLALHRELDYYTGLVFEMFAPGVGAPIAQGGRYDEL---GAPAVGFAFEVERVMAVLEAQEEGEGEC......................................... 373
32 -9.4105e3i_A mol:protein length:438 Histidine--tRNA ligase  ali model follow..  10  24.........................................................................................................................RRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDA--TDIVEKEMYTFFDKGNPPESLTLRPEGTAGCVRALVEHNLLRGATPRVWYMGPMFRYEKP-QKGRYRQFHQVETFGVATPDIDAELIMLTARLWKRMGVDHM--------------------------------------LELNTLGETDERTEYRNALVAFLNEHKDALDEDSQRRLTTNPLRILDSKIESTQKILENAP--KLHDFLKEDSLSHFQQLQDYLTAAGIKFVINQKLVRGLDY---YNKTVFEWTTTALGSQGTVCAGGRYDGLV----GQLKGKADQSVPAV---GFAMGMERLLLLLEQVEQAEIVRLVAEPAYQSKALVLAEQLANSNIRIKTGSQGSMKSQMKKADQAGAVYAIILGERE 398
33 -9.2404g84_A mol:protein length:464 Histidine--tRNA ligase, cytoplasmic  ali model follow..  11  32.........................................................................................................................EKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKL--------IYDLKDQGGELLSLRYDLTVPFARYL---AMNKLTNIKRYHIAKVYRRDNAMTRGRYREFYQCDFDIAGNFDPMAECLKIMCEILSSLQIGDFLVKVNDR---------GMFAICGVSDSKFRTICSSVDKLDKVSWEEVKNEMVGEKGLAPEVAD----IGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCGVERIFSTETQVLVASAQKKVSELWDAGIKAELLYKKNLQYCEEAGIPLVAIIGEQELKIKLRSVTSREEVDVRREDLVEEIKRRTGQPL............... 464
34 -9.1303net_A mol:protein length:465 Histidyl-tRNA synthetase  ali model follow..  11  30.........................................................................................................................LYLLDTIRRVYESYGFTPIETPAVERLEVLQAKGNQGDNILPPNRQAEKDKSGDTGSEARALKFDQTVPLAAYIARHLNDLTFPFARYQMDVVFRGERA-KDGRFRQFRQCDIDVVGRELYDAQMPAIITEIFEAVNIGDFVIRIN------------------------------------------NRKVLTGF-------SLNISETQIKSCISIIDNLEKIGEAKVKLELEKEGINPEQTQKIIDFVKIDGSVDDVLDKLKHLSQTLPESE--QFNLGVSELETVITGVRNLGVPDKRFCIDLAIARGLNYYTGTVYELVGTFIGEKMPGVGISIGLTRLISRLLKAGILNTLVVNMQDELMPTYLKVSQQLRQAGLNVINFEKRQLGKQFQAADKQGIRFCVIIGADE 432

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.