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Query: 3hri_A mol:protein length:456 Histidyl-tRNA synthetase, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAMGTLEAQTQGPGSMQMNMVETEPVQGCRDFPPETMRLRKYLFDVFHSTARKFGFEEYDSPVLESEELYIRKAGEEITEQMFNFITKGGHRVALRPEMTPSLARQLLAKGRSLLLPAKWYSIPQCWRYEAITRGRRREHYQWNMDIIGVKSVSSEVELVCAACTAMQSLGLSSKDVGVKINSRKILQTVVEQAGVSADKFAPVCVIVDKMEKLPREEVVAQLAAIGLESNVVDAITSTLSLKTIDEIAQRIGEEHEAVRELRDFITQIEAYGFGDWVIFDASVVRGLAYYTGIVFEGFDRDGNFRALCGGGRYDNLLTTYGSPTAVPCVGFGFGDCVIVELLNEKKLLPELHHVVDDLVIPFDETMRPHALSILRRLRDAGRSADIVFDKKKVVQAFNYADRIGALRAVLVAPDEWARGEVRVKMLREGAGREEGANERGIVLPVDKIVLast
1 -132.0003hri_A mol:protein length:456 Histidyl-tRNA synthetase  ali model  100  1MAMGTLEAQTQGPGSMQMNMVETEPVQGCRDFPPETMRLRKYLFDVFHSTARKFGFEEYDSPVLESEELYIRKAGEEITEQMFNFITKGGHRVALRPEMTPSLARQLLAKGRSLLLPAKWYSIPQCWRYEAITRGRRREHYQWNMDIIGVKSVSSEVELVCAACTAMQSLGLSSKDVGVKINSRKILQTVVEQAGVSADKFAPVCVIVDKMEKLPREEVVAQLAAIGLESNVVDAITSTLSLKTIDEIAQRIGEEHEAVRELRDFITQIEAYGFGDWVIFDASVVRGLAYYTGIVFEGFDRDGNFRALCGGGRYDNLLTTYGSPTAVPCVGFGFGDCVIVELLNEKKLLPELHHVVDDLVIPFDETMRPHALSILRRLRDAGRSADIVFDKKKVVQAFNYADRIGALRAVLVAPDEWARGEVRVKMLREGAGREEGANERGIVLPVDKIV 450
2 -130.0003hrk_A mol:protein length:456 Histidyl-tRNA synthetase  ali model follow..  85  1MAMGTLEAQTQGPGSMQKNMVETEPVQGCRDFPPEAMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKAGEEITEQMFNFITKGGHRVALRPEMTPSLARLLLGKGRSLLLPAKWYSIPQCWRYEAITRGRRREHYQWNMDIVGVKSVSAEVELVCAACWAMRSLGLSSKDVGIKVNSRKVLQTVVEQAGVTSDKFAPVCVIVDKMEKIPREEVEAQLAVLGLEPTVVDAITTTLSLKSIDEIAQRVGEEHEAVKELRQFFEQVEAYGYGDWVLFDASVVRGLAYYTGIVFEGFDREGKFRALCGGGRYDNLLTTYGSPTPIPCAGFGFGDCVIVELLQEKRLLPDIPHVVDDVVIPFDESMRPHALAVLRRLRDAGRSADIILDKKKVVQAFNYADRVGAVRAVLVAPEEWERGEVQVKMLREGTGKEEGGAERGFAVPLDRLV 450
3 -114.0001wu7_A mol:protein length:434 Histidyl-tRNA synthetase  ali model follow..  35  1.................MYRLQIEKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEELLQQTYSFVDKGGREVTLIPEATPSTVRMVTSRK-DLQRPLRWYSFPKVWRYEEPQAGRYREHYQFNADIFGSDSPEADAEVIALASSILDRLGLQD-IYEIRINSRKIMEEIIG--GMTSSDPFSVFSIIDRYHKISREEFVDQLRSAGIGEDGVSMIADLCSGRGIDEMARITGKSSEEIARMAAVEDLLASYGVKN-VRYDFSIVRGLSYYTGIVFEAYDRSGQFRAILGGGRYDNLASLMSGES-VPAVGFGMGDAVISLLLKRENVQIP-REKKSVYICRVGKINSSIMNEYSRKLRERGMNVTVEIMERGLSAQLKYASAIGADFAVIFGERDLERGVVTIRNMYTGSQENVGLDSVVEHLISQ... 424
4 -108.0003net_A mol:protein length:465 Histidyl-tRNA synthetase  ali model follow..  22  1...........SNAMAKNDKINFSTPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKGNQNRQAEKDKSGDTGSEARALKFDQTVPLAAYIARHLNDLTFPFARYQMDVVFRGERAKDGRFRQFRQCDIDVVGRESLLYDAQMPAIITEIFEAVNIG--DFVIRINNRKVLTGFFQSLNISETQIKSCISIIDNLEKIGEAKVKLELEKEGINPEQTQKIIDFVKIDGLSQTLPESEQFNLGVSELETVITGVRNLGVPDRFCIDLAIARGLNYYTGTVYETTLIGEALGSICSGGRYEELVGTFIGEK-MPGVGISIGLTRLISRLLKAGILNTLPTPAQVVVVNMQDELMPTYLKVSQQLRQAGLNVITNFEKRQLGKQFQAADKQGIRFCVIIGADEAAAQKSSLKDLQSGEQVEVALADLAEEIKR.... 462
5 -106.0004g85_A mol:protein length:517 Histidine-tRNA ligase, cytoplasmic  ali model follow..  26  50.....LKLKAQLGPDESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGED-SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNK---LTNIKRYHIAKVYRRDNPARGRYREFYQCDFDIAGNFDPMPDAECLKIMCEILSSLQIG--DFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDKLDKVSWEEVKNEMVGKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQLGVGSVAAGGRYDGLVGMFDPKRKVPCVGLSIGVERIFSIVEQRLEALERTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRR... 512
6 -104.0004g84_A mol:protein length:464 Histidine--tRNA ligase, cytoplasmic  ali model follow..  26  1.........GPGSEFELRRQFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGED-SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNK---LTNIKRYHIAKVYRRDNPTRGRYREFYQCDFDIAGNFDPMPDAECLKIMCEILSSLQIG--DFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDKLDKVSWEEVKNEMVGKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQLGVGSVAAGGRYDGLVGMFDPKRKVPCVGLSIGVERIFSIVEQRLEALERTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRR... 459
7 -103.0001qe0_A mol:protein length:420 Histidine--tRNA ligase  ali model follow..  23  2......................IKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSVQKEMYTFKDKGDRSITLRPEGTAAVVRSYIEHKGNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLK--HLKLVINSVGDMASRKEYNEALVKHFEPVIHEFCSDCQ------------SRLHTDPMRILDCKVDIKTAPRITDFLNE--ESKAYYEQVKAYLDDLGIP--YTEDPNLVRGLDYYTHTAFELMMDNGAITTLCGGGRYNGLLELLDGPS-ETGIGFALSIERLLLALEEEGIELDIEENLDLFIVTMGDQADRYAVKLLNHLRHNGIKADKDYLQRKIKGQMKQADRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFKK.... 420
8 -103.0004rdx_A mol:protein length:423 Histidine--tRNA ligase  ali model follow..  23  1..................GPMTARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAAVRKEMFTFQDRGGRSLTLRPEGTAAMVRAYLEHGMVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLR--RLKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDSKERLEL-----NPMRILDSKSERDQALLKELGVRPMLDFLGE--EARAHLKEVERHLERLSVP--YELEPALVRGLDYYVRTAFEVHHEEGAQSALGGGGRYDGLSELLGGPR-VPGVGFAFGVERVALALEAEGFGLPEEKGPDLYLIPLTEEAVAEAFYLAEALR-PRLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYLLQ.... 420
9 -102.0005e3i_A mol:protein length:438 Histidine--tRNA ligase  ali model follow..  20  1.................MAMSSIVAIKGFNDVLPTQTAAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDAVEKEMYTFFDKGNESLTLRPEGTAGCVRALVEHNLLRGATPRVWYMGPMFRYEKPQKGRYRQFHQFGVETFGVATPDIDAELIMLTARLWKRMGVDHM-VQLELNT----------LGETDERTEYRNALVAFLNEH--KDALDEDSQRRLTTNPLRILDSKIELENAPKLHDFLKE--DSLSHFQQLQDYLTAAGIK--FVINQKLVRGLDYYNKTVFEWTTTAGSQGTVCAGGRYDGLVGQLKGKQSVPAVGFAMGMERLLLLLEQVEQAEI--VRDCEAFLVAEPAYQSKALVLAEQLRDQLEAANSNIRQGSMKSQMKKADQAGAVYAIILGEREWEAQQLAVKELATAEQSQVALAELVPFLIEK... 429
10 -101.0002el9_A mol:protein length:431 Histidyl-tRNA synthetase  ali model follow..  23  1...........GPGYQDPMAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISE-HVTLELNS----------IGSLEARANYRDALVAFLEQH--KEKLDEDCKRRMYTNPLRVLDSKNPLNDAPALGDYLDE--ESREHFAGLCKLLESAGIA--YTVNQRLVRGLDYYNRTVFEWVTNSGSQGTVCAGGRYDGLVEQLGGRA-TPAVGFAMGLERLVLLVQAVNPEFKADPVVDIYLVASGADTQSAAMALAERLRDEGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLRT.... 428
11 -95.3003od1_A mol:protein length:400 ATP phosphoribosyltransferase regulatory subunit  ali model follow..  21  1.............SNAMSKPFMFEKPFGMRDTLPEWYKTKKNICDQMTEEINLWGYDMIETPTLEYYETV-GVVSAILDQQLFKLLDQQGNTLVLRPDMTAPIARLVASSLKDRAYPLRLAYQSNVYRAQQNEGGKPAEFEQLGVELIGDGTASADGEVIALMIAALKRAGLS--EFKVAIGHVGYVNALLMDVVGNEQRADRLRRFLYEKNYVGYREHVKSLNLSTIDKSRLMNLLSLRGGRAAIEEARGLIQTKTALAEMTKLYEVLESYGASEYVKFDLTLVLHMSYYTGVVFEGYGNRLG-VPLCSGGRYDELLSKFHRP--AQATGFGVRIDLLVEALNGEII----SNGHEQTCILFSNERRFEAIELARKKRANGEAVVLQDLAGVTDVDAMSSNYQDVIYCIGTAGRGGEDA.............................. 400
12 -94.4004e51_A mol:protein length:467 Histidine--tRNA ligase  ali model follow..  22  5.TLEAQTQGPGSMTEQKRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTPLFTRGIGEVVEKEMYSFVDANGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIVMMCQRLWEDLGLT--GIKLEINS----------LGLAEERAAHRVELIKYLEQ--HADKLDDDAQRRLYTNPLRVLDTKNPVRNAPKLIDFLGD--VSRAHFEGLQRLLKANNVP--FTINPRLVRGLDYYNLTVFEWVTDKGAQGTVAAGGRYDPLIEQLGGKP-TAACGWAMGIERILELLKEEHLVPE-QEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSGASFKSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRKSVQQSVPVESLTEFLIN.... 450
13 -84.7003rac_A mol:protein length:373 Histidine-tRNA ligase  ali model follow..  21  5....NGTRSAWGARAWEAVRGFADRPPGMQDGYPDFAKRRRAVETRLLSFVEDAGYEPVTSGLFEYVDTLLRARSPESSRDWIRLFDGGGDAVALRPEMTPSIARMAAPRVAAGRTPIRWCYCERVYRRTSWASGKAAESTQVGIERIGEEASVVDMDVLRLLHEASAAAGVR--HHRIVVSHARLVPRLLDALGISASLSRAFLACLTSGNYVQFRELWQLHAAKDVDLLANLLTWSPAERDAAKRSREASADVRDAWRYLCRLAEALHDSGLSDVVTFDLALHRELDYYTGLVFEMFAPGVG-APIAQGGRYDELLAQFGAG--APAVGFAFEVERVMAVLEAQEEGEGE.................................................................................................. 372
14 -80.5006FTT Entity 1(prereleased)  ali follow..  19  4.........................PDGVADVLFEDAHKQEVLRHQLTQQLITHGYQLVSPPMIEFTESLLSGASEDLKRQTFKIIDQTGRLMGIRADITPQILRIDAHHGGD--GIARYCYAGDVIHTLPSGLFGSRTPLQLGAEIFGCESIAADIELIDVLFSMINSLDMSA-VLHVDLGHVTIFKRLAELAALSASDTEQLMQLYANKNLPELKQVCQVLPMGSDFYTLARFGHDIANLGRLSENAQQDTKIVTAIDELQRLKAHLQVQW-QCAVSIDVTELSGYHYHTGIVFNGYIN-SETQPLVRGGRFDGMKSNQLANQPRQATGFSMDVSRLLAHTQLDAPFI--VLIDYDAFNNLDSAQRQLLLQQVASLRQQGYRVTMPLTAEDMPVGLTHADNQWRLHAV........................................ 388
15 -80.5005m8h_A mol:protein length:388 ATP phosphoribosyltransferase regulatory subunit  ali model follow..  19  4.........................PDGVADVLFEDAHKQEVLRHQLTQQLITHGYQLVSPPMIEFTESLLSGASEDLKRQTFKIIDQTGRLMGIRADITPQILRIDAHHGGD--GIARYCYAGDVIHTLPSGLFGSRTPLQLGAEIFGCESIAADIELIDVLFSMINSLDMSA-VLHVDLGHVTIFKRLAELAALSASDTEQLMQLYANKNLPELKQVCQVLPMGSDFYTLARFGHDIANLGRLSENAQQDTKIVTAIDELQRLKAHLQVQW-QCAVSIDVTELSGYHYHTGIVFNGYIN-SETQPLVRGGRFDGMKSNQLANQPRQATGFSMDVSRLLAHTQLDAPFI--VLIDYDAFNNLDSAQRQLLLQQVASLRQQGYRVTMPLTAEDMPVGLTHADNQWRLHAV........................................ 388
16 -74.0001z7m_A mol:protein length:344 ATP phosphoribosyltransferase regulatory subunit  ali model follow..  18  2........RGSGSIEGRMEKINYLLPEESAEMTLNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGNQEKMFQFIKHEGQSITLRYDFTLPLVRLYSQIKDS--TSARYSYFGKIFRKEKRHKGRSTENYQIGIELFGESADKSELEILSLALQVIEQLGLN--KTVFEIGSAKFFQRLCQLADGSTEL------LTELLLKKDLSGLNAFIEKNNFSKELRGLLKEIFITNELSRLENLVTNDDVLISSFDQLKEFSEKLSMIKPIIIDLGMVPKMDYYTDLMFKAYSS-AANQPILSGGRYDQLLSNFQEE--AFAIGFCCHMDTILKALERQELEEDND................................................................................................. 338
17 -65.4001usy_A mol:protein length:275 ATP PHOSPHORIBOSYLTRANSFERASE REGULATORY SUBUNIT  ali model follow..  16  2..............................DFLDFE------KVFSFYSKATKKGFSPFFVPALEKAEEP----------AGNFFLDRKGNLFSIREDFTKTVLNHRKRYSPD--SQIKVWYADFVYRYSG---SDLVAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEG--PVIVEIGHTGVYEDLLKEIPKDLHE-----KVLNLIDTKNLAEIEFLSHMKKIDLSRVEKIIEDSIYRRSPEHLKTMDLPLSVREDLLSASSFLQEKFPTVSVEIDLTLARTIEEYCGLIFTIYDT-SSSRLVAAGGEYTVNGE--------KGVGGSIFLEGK............................................................................................................... 273
18 -48.9004cs2_A mol:protein length:274 PYRROLYSINE--TRNA LIGASE  ali model follow..  16  18.PKDEISLNSGKPFRELESELLSRRKKDLQQIYAEEREYLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDN-DTELSKQIFRVDKNFCLRPMLAPNLANYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLESI--ITDFLNHLGI---DFKIVGDSCMVFGDTLDVMHGDLELSSAVVGPIPLDRE------------WGIDKPWIGAGFGLERLLKVKHDFKNIKRAARSESYYNGISTNL..................................................................................................................................................................................... 268
19 -47.4002lw7_A mol:protein length:170 Histidine--tRNA ligase, cytoplasmic  ali model follow..  13  3...........................................................................................................................................................................................................................................................................................................RAALEELVKLQGERVRGLKQQKASAELKAQLGPDESKQKFVLKTPKALEEKIRTTETQVLVASAQKKLLEERLKLVSELQDAGIKAELLYKKNKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRR... 162
20 -45.1003qtc_A mol:protein length:290 Pyrrolysyl-tRNA synthetase  ali model follow..  14  32.PKDEISLNSGKPFRELESELLSRRKKDLQQIYAEEREYLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDN-DTELSKQIFRVDKNFCLRPMLTPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLVFWQMGSGCTRENLESI--ITDFLNHLGI---DFKIVGDSCMVFGDTLDVMHGDLELSSALVGPLDREWGIDKPWIGAGFGLERLLK---------------------VKHDFKNIKRAARSESYYNGISTN............................................................................................................................................................................... 281
21 -44.5004bw9_A mol:protein length:291 PYRROLYSINE--TRNA LIGASE  ali model follow..  14  35.PKDEISLNSGKPFRELESELLSRRKKDLQQIYAEEREYLGKLEREITRFFVDRGFLEIKSPILIPLEYI-ERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLGNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLESI--ITDFLNHLGI---DFKIVGDSCMVFGDTLDVMHGDLESAVVGPRPLDREWGIDKPWILERLLKVKHDFKNIKRAARSESYYNGIST.......................................................................................................................................................................................................... 283
22 -41.7005k1p_A mol:protein length:274 Pyrrolysine--tRNA ligase  ali model follow..  17  17NPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDN-DTELSKQIFRVDKNFCLRPMLAPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLAFAQMGSGCTRENLE--SIITDFLNHLGIDFKIVGIPLDREWGIDKPWIGAGFGLERLLKVKHDFKNIKRAARSESYYNGISTNL.............................................................................................................................................................................................................................. 268
23 -39.1002e3c_A mol:protein length:291 Pyrrolysyl-tRNA synthetase  ali model follow..  17  35.PKDEISLNSGKPFRELESELLSRRKKDLQQIYAEEREYLGKLEREITRFFVDRGFLEIKSPILIPLEYI-ERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLE--SIITDFLNHLGIDFKIVG-PLDREWGIDKPWIGAGFGLERLLKVKHDFKNIKRAARSGSYYNGISTNL.............................................................................................................................................................................................................................. 285
24 -38.9004q6g_A mol:protein length:267 Pyrrolysine--tRNA ligase  ali model follow..  14  16NPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEEREYLGKLEREITRFFVDRGFLEIKSPILIPLEYIE-RMGIDNDTELSKQIFRVDKNFCLRPMVAPNIFNYARKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFFQMGSGCTRENLE--SIITDFLNHLGI---DFKIVGDSCSVYGDTLDVMHGDLELSSAVVGPIPLDREWGIDK-LERLLKVKHDFKNIKRA...................................................................................................................................................................................................................... 253
25 -35.3004tqd_A mol:protein length:291 Pyrrolysine--tRNA ligase  ali model follow..  18  35.PKDEISLNSGKPFRELESELLSRRKKDLQQIYAEEREYLGKLEREITRFFVDRGFLEIKSPILIPLEYI-ERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLSFIQMGSGCTRENLE--SIITDFLNHLGIDFKIVGLELSSAVVGPIPLDGAGFGLERLLKVKHDFKNIKRAARSESYYNGISTNL.............................................................................................................................................................................................................................. 285
26 -31.3002zni_A mol:protein length:308 Pyrrolysyl-tRNA synthetase  ali model follow..  15  81.................................VKHRPALLELEEKLAKALHQQGFVQVVTPTIITKSALAKMTIGE-DHPLFSQVFWLDGKKCLRPMLAPNLYTLWRELERLWDKPIRIFEIGTCYRKESQGAQHLNEFTMLNLTELGTPLEERHQRLEDMARWVLEAAGIR--EFELVTESSVVYGDTVDVMK............................................................................................................................................................................................................................................................... 239
27 -29.7002i4l_A mol:protein length:458 Proline-tRNA ligase  ali model follow..  14  31......EAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLADLWRES--DAYGPEMLRIADRHKRELLYGPTNEEMITEIFRAYIKSYKLPLNLYHIQWKFRDERPRFGRGREFLMKDAYSFDVDEAGARNKMFVAYLRTFARMGLKAIPMRAETGPIGGDLS----------------EFIVLAETGESGVYIDRDVLNLPVPDENVDYDGDLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMKANVTGPDGTDAPIHGG--------------------YGVGVSRLLGAIIEACIWPEAVAPFRVTILNLDAATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELKRRSDGARENLALADVVARLT..... 452
28 -27.1002j3l_A mol:protein length:572 PROLYL-TRNA SYNTHETASE  ali model follow..  16  11LREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESG-ETYGPNLYRLKDRNDRDYILGPETFTELIRDEINSYKRL--PLNLYQIQTKYRDERSRSGRGREFIMKDGYSFHADEASLDQDYEKAYSRIFERCGLESKEFMAISEIGEDTICYSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEVANFFEVEPQRIIKSVLLDEATEEDARRVLGAGFGSIGPVNVSEDVKIVLAFTKGIE--IGHIFKL------------GTRYSDAMGA-NGREKSVIMGYGIGVSRLLSAIVEQNNWPTGIAPFDLHVVQMDEYQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVG-KKAVDGVVEVKIKRTGEMLEVRKEELESTLSI.... 563
29 -24.7005ucm_A mol:protein length:579 Proline--tRNA ligase  ali model follow..  16  36.......................RLASGLYTWLPMGLRVLRKVETIVREEMNAAGALEVLMPAVQPAELWQES--EQYGPELLRLKDRHEREFCVGPEVITDLARNELNSYKQL--PINFYQIQTKFRDERPRFGRGREFIMKDAYSFHLSQDSLQQGMYQAYSKIFSRLGLDSHEFHVLANSGEDDIVFSDSSDYAANIEKAEAVPRESARGSATEDMRLVDTPNTKTIAALVDGFQLPIEKTIKTLVVHGAEEGTLVALIVRGDHELNEIKAANQPLVALVIKRGIE--VGHIFQL------------GTKYSEAMKL-QGKPVNLIMGYGIGVSRVVAAAIEQNLWPSALAPFQIALVPLTESVKQATDKLYAELTAAGFEVLLD-KKTSPGVKFADMELIGIPHRIVISDRGLSEGVLEYKGRRDSESQNLPIGELMSFITE.... 569
30 -24.2004ncx_A mol:protein length:506 Proline--tRNA ligase  ali model follow..  11  10SKKIENFSDWYTQVIVKSELIEYYDISGCYILRPAAYYIWECVQAFFNKEIKKLNVENSYFPLFVTKNKLEKEKNEGFSPEVAWVTKYGDSEIAIRPTSETIMYSVFPKWIRSYRLPLKLNQWNTVVRWEKQPTPRTREFLWQEGHTAHKNEEEAV-KLVFDILDLYRRW--------------------------------------------------------------YEEYLAVPIIKGIKSEGEKFGGANFTSTAEAFISENGRAIQAATSHYLGTNFAKMFKI-------------------------EFEDENEVKQYVHQTSWGCTTRSIGIMIMTHGVLPPNVSKYKVVIVPIFNAIHSYCKDIEKILKNAQINCVYD-ASYSPGYKFNHWELRGIPIRIEVGPKDLQNNSCVIVRRDNNEKCNVKKESVLLETQQ.... 389
31 -24.2005f9y_A mol:protein length:511 Aminoacyl-tRNA synthetase  ali model follow..  13  14ADKITSFADWYSQVIVKSEMIEYYDISGCYILRPWSYFIWETIQSVFDQKIKQHDVQNAYFPIFVTQKKLETEKDEGFSPEVAWVTKSGKSDIAIRPTSETIMYPYFAKWIRSHRLPLKINQWTSIVRWEKHPTPRTREFLWQEGHTAHSTRKEAL-EMVDIILNEYASI--------------------------------------------------------------YEDLLATPVVKGTKSENEKFPGGDITKSIEGFIPEIGRAVQAATSHLLGQNFSKMFGV-------------------------EFEDEKGNKEYAHQTSWGLTTRAIGVMIMTHGVLPPKVAPVQVIIIPIIEEQKKICNEVECILKKAGVRVKID-SNYTPGWKYNHWEVKGVCLRFEVGPRDIEKRSVRVVVRDNMEKMDIPISELESKIPK.... 393
32 -24.0005xif_A mol:protein length:500 Prolyl-tRNA synthetase (ProRS)  ali model follow..  12  6AKKDENFSEWYTQAIVRSEMIEYYDISGCYIMRPWAFHIWEKVQRFFDDEIKKMGVENSYFPMFVSRHKLEKEKDEGFSPEVAWVTHYGDSPIAIRPTSETIMYPAYAKWIRSHRLPLKLNQWCSVVRWEKQPTPRTREFLWQEGHTAHATEEEAW-ELVLDILELYRRW--------------------------------------------------------------YEECLAVPVIKGEKSEGEKFAGGKKTTTVEAFIPENGRGIQAATSHLLGTNFAKMFE--------------------------EFEDEEGHKRLVHQTSWGCTTRSLGVMIMTHGVIPPRVASVQVVIIPILGEILGKCRELKTMLEKADIRVRID-SNYTPGWKYNHWEVKGVPLRLELGPKDLAKGTARVVRRDTGEAYQISWADLAPKLLE.... 385
33 -23.3004k86_A mol:protein length:535 Proline--tRNA ligase  ali model follow..  13  35AKKEENLADWYSQVITKSEMIEYHDISGCYILRPWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQSALEKEK-VADFAPEVAWVTRSGEPIAIRPTSETVMYPAYAKWVQSHRLPIKLNQWCNVVRWEKHPQPRTREFLWQEGHSAFATMEEAAEEVLQIL---------------------------------------------------------------DLYAQVYEELLAIPVVKGRKTEKEKFAGGDYTTTIEAFISASGRAIQGGTSHHLGQNFSKMFEI-------------------------VFEDPKIPGEKQFAYQNSWGLTRTIGVMNMGLVLPPRVACVQVVIIPCGEALIAKCNDYRRRLLSVNIRVRAD-DNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVRRDTGEKLTVAENEAETKLQA.... 420
34 -23.2005xip_A mol:protein length:498 Prolyl-tRNA synthetase, putative  ali model follow..  14  7AKKSTNFADWYTQVIVRGELVEYYDISGCYIIRPWAYRIWEAVQKFFDDGIKRLGVENCYFPMFVSQAKLEKEKDEGFKPEVAWVTHYGDSELAIRPTSETIMYPAYAKWIRSHRLPLKLNQWNNVVRWEKQPTPRTREFLWQEGHTAHATEEEAYTLVLEIL-------------------------------------------------------------------ELYRQWYEDYLAVPVIKGEKSENEKFAGGKKTTTIEGIIPDTG---------GIQAATSHLLGQNFSRMFS--------------EFEDEKGAKQLVHQTSWGCTTRSLGVMIMTHGVLPPRVVAVQAVIIPIIMEIVAKCRELERLLNAAGVRVKVD-TNYTPGWKFNDWELKGVPLRLEIGPRDVESCQTRVVRRDTSEARNVPWAEAASTIPA.... 386
35 -22.8001h4q_A mol:protein length:477 PROLYL-TRNA SYNTHETASE  ali model follow..  14  23...............QKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEEGFSPELAVVTHAGEEPLAVRPTSETVIGYMWSKWIRSWRLPQLLNQWGNVVRWEMRTRPRTSEFLWQEGHTAHATREEAEEEMLSIYARLAREYAAIPVIEGLKTEKEK--------------------------------------------------------------------AGAVYTTTIEALMKDGKALQAGTSHYLGENFARAFDI-------------------------KFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGVLPPRLAPIQVVIVPIRERVLEAAQGLRQALLAQGLRVHLD-DQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLAS-RLGGKETLPLAALPEALPG.... 383
36 -22.6004hwo_A mol:protein length:411 Threonine--tRNA ligase  ali model follow..  13  22..........................PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRLPLRMAEFGSCHRNEPSGS-RVRGFTQDDAHIFCTEEQIRDNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGS---------------DEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEF---------------------TLYDCLDRAWQCGTVQLDFSLPSRLSAYVGEDNERKVPVMIHRAILG------------------------SMERFIGILTEEGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQE... 392
37 -22.6004hvc_A mol:protein length:519 Bifunctional glutamate/proline--tRNA ligase  ali model follow..  14  19AKKEENLADWYSQVITKSEMIEYHDISGCYILRPWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQSALEKEKTVADFAPEVAWVTRSGEPIAIRPTSETVMYPAYAKWVQSHRLPIKLNQWCNVVRWEKHPQPRTREFLWQEGHSAFATMEEAAEEILDLYAQVYEELLAIPVVKGRKTEKEK-------------------------------------------------------------------AGGDYTTTIEAFISASGRAIQGGTSHHLGQNFSKMFEI-------------------------VFEDPKIPGEKQFAYQNSWGLTRTIGVMNMGLVLPPRVACVQVVIIPCGEALIAKCNDYRRRLLSVNIRVRAD-DNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVRRDTGEKLTVAENEAETKLQA.... 404
38 -22.5003a31_A mol:protein length:471 Probable threonyl-tRNA synthetase 1  ali model follow..  14  13AYELDITVKPDSRVPVFNREFATFTGAGVPLFSLGGGPIRYALAEVLAKFHARRGYYVVETPIIASTELFKVSGHIEFYRNNMYLFDIEGHEFAVKPMNCPYHILLFLNEVAKHPLPFKVFEFGRVHRYEPSGS-RVRGFTQDDAHIIVPGGRVIDFEEMKLVLERLFKLGVSSETFKVRLSMSDKSLIGKEFMGSKEEWEGAEEALREAASRINEKYGIDIVELEGEAAFYGPKLD-----------------------IMMVEESGVSKEWQMGTIQFDFNLPRRLYDVVREEFGIEEVYIIHRALLG------------------------SIERFLGVYLEHGRMPFTLAPIQFAVIAVKTGGEDLASSIAKGLLDKGFRVAVKGSSKTLSSDVRHIESTAKPAVVFIGAKEVREKVLDVRVFDLESMKRRRLAIAYGDAADA... 438
39 -22.5004p3n_A mol:protein length:415 Threonine--tRNA ligase, cytoplasmic  ali model follow..  17  26..........................PGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKELFALKPMNCPGHCLMFDHRPRSWRLPLRLADFGVLHRNELSGA-RVRRFQQDDAHIFCAMEQIEDKGCLDFLRTVYSVFGFS----------------FKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDI---------------------QIKDAIGRYHQCATIQLDFQLPINLTYVSHDGDDKKRPVIVHRAILG------------------------SVERMIAILTENGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQL... 397
40 -22.3005xil_A mol:protein length:512 Putative prolyl-tRNA synthetase  ali model follow..  13  22...............TKAEMIEYYDVSGCYIIRPWAYYVWKCVQRFLGGKIEKLGVEDCYFPMFVSRSCLEREKDEGFAPEVAWVTRAGDTEVAVRPTSETVMYPYYAKWIRSHRLPVRLNMWNNVIRWESHPTPRTREFLWQEGHCAWAKAEECAKEVLEIL---------------------------------------------------------------ECYASVYEQLLAVPVVRGRKTEKEKFAGGDYTTTVETFIEAVGRGCQGATSHNLGQNFGKMFDI-------------------------RFQDPENNEQTLIPWQNSWGLTRVIGVMNRGMVMPPRVASTQVIIIPVGQELLASCWRLESELCEGGVRARCD-DNYSPGWRFNHWEVKGVPLRVELGPRELAERSLAVAVRHSGARHSVAWDAQTPAAVAALL. 395
41 -22.3004hwt_A mol:protein length:413 Threonine--tRNA ligase, cytoplasmic  ali model follow..  17  22..........................PGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKELFALKPMNCPGHCLMFDHRPRSWRLPLRLADFGVLHRNELSGA-RVRRFQQDDAHIFCAMEQIEDKGCLDFLRTVYSVFGFS----------------FKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDI---------------------QIKDAIGRYHQCATIQLDFQLPINLTYVSHDGDDKKRPVIVHRAILG------------------------SVERMIAILTENGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQL... 393
42 -22.3001nj1_A mol:protein length:501 Proline-tRNA Synthetase  ali model follow..  16  52.......................YPVKGMHVWMPHGFMIRKNTLKILRRILDR-DHEEVLFPLLVPEDELAKEAIKGFEDEVYWVTSKLQRKLALRPTSETVMYPMFALWVRSHTLPMRFYQVVNTFRYETKHT-VREITTFKEAHTIHATASEAEEQAVEIYKEFFNSLGIPYLITRRPPWDKF--------------------------------------------------------------------PGSEYTVAFDTLMPDGKTLQIGTVHNLGQTFARTFE----IKFETPEGDHEYVHQTCYGLSDRVIASV-----------------IAIHGDESGCLPPDVAAHQVVIVPIAEEVMEACRELRSRLEAAGFRVHLDDRDIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTADLQGIEETLRE.... 404
43 -21.8001nyq_A mol:protein length:645 threonyl-tRNA synthetase 1  ali model follow..  13  235LEERKERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTS--DHYQEDMFPPMLDETESMVLRPMNCPHHMMIYANKPHSYRLPIRIAELGTMHRYEASGA-RVRGMTLNDSHIFVRPDQIKEKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELG-----------LSYEEAIGEAAFYGPKLDV---------------------QVKTAMGKEETLSTAQLDFLLPERFDLYIGQDGEHHRPVVIHRGVVS------------------------TMERFVAFLTEEGAFPTWLAPKQVQIIPVNVDLYDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDE... 638
44 -21.5001b76_A mol:protein length:442 Glycine--tRNA ligase  ali model follow..  15  4.SLDELVALCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRVYERDDMEGLDASVLTHRLVLHYS--ATFADPMVD-RGGRGLLAYLRPETAQGIFVNFKNDATSRKLGFGIAQIGKAFRNEITPR-RVREFEQMEIEYFVRPGEDEYRYWVEERLKWWQEMGLSRENLVPYQQP-------------PESSAHYAKATVDILYRFPHGSLELE----GIAQRTDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVL-------------------------------------KLKPQLAPIKVAVIPLRPEITEYAKRLKARLLALGLGRVLYEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSTVTVRDRDTMEQIRLHVDELEGFLRER... 439
45 -21.2003ial_A mol:protein length:518 Prolyl-tRNA synthetase  ali model follow..  15  36.......................YPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDKGFEAECFWVEQPLEERLALRPTSETAIYSMFSKWVRSYKLPLKIHQTCTIFRHEKNTKPRVREIHWNEAHCCHATAEDAVSQLSDYW------------KVIDTIFSDELCFKGQKLRRVCWDRF----------------------------------------------------PGADYSEVSDVVMPCGRVLQTAGIHNLGQRFSSTFD----ILYANKANESVHPYLTCAGISTRVLACA-----LSIHGDSGGL-----------VLPPLIAPIHVVIIPIGCGKKNNQESADTLKSKLGLRVSID-FSKSMGDKLYYYELKGVPLRIEVGQRDLANGQCIVVPRDVGKDQKIPITEVMKVSSHT... 399
46 -21.2001nj8_A mol:protein length:459 Proline-tRNA Synthetase  ali model follow..  14  25.......................YPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTLPIKIYQIVNTFRYETKHT-RLREIMTFEAHTAHSTKEEAENQAISIYKKFFDTLGIPYLISKRPEWDK---------------------------------------------------------------------PGAEYTMAFDTIFPDGRTMQIATVHNLGQNFSKTFEI-------------------------IFETPTGDKDYAYQTCYGISDRVIASIIAIHGILPPIVAPIQVVIVPLKEDIVMEKAKEIYEKLKGKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEK.... 377
47 -20.0001qf6_A mol:protein length:642 THREONYL-TRNA SYNTHETASE  ali model follow..  13  258.......................EEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRLPLRMAEFGSCHRNEPSGS-RVRGFTQDDAHIFCTEEQIRDNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGS---------------DEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEF---------------------TLYDCLDRAWQCGTVQLDFSLPSRLSAYVGEDNERKVPVMIHRAILG------------------------SMERFIGILTEEGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQE... 631
48 -18.5003ugq_A mol:protein length:460 Threonyl-tRNA synthetase, mitochondrial  ali model follow..  13  45.......................PLSPGSMFFLPNGAKIFNKLIEFMKLQQKKFGFNEVVTPLIYKKTLWEKS--ENYADDMFKVEDEEKEEYGLKPMNCPGHCLIFGKKDRSYNLPLRFSDFSPLHRNEASGA-RLRKFHQDDGHIFCTPSQVKSFNSLKLIDIVYNKIFPFVKGGSGAESNYFI------NFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLDI---------------------MVTDHLRKTHQVATIQLDFQLPERFDLFKDQDNSYKRPIMIHRATFG------------------------SIERFMALLIDSGRWPFWLNPYQAVIIPVNTKNVQQLDMCPVPLNDWHFNVDLDIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKSFKLTMSQIWEKFIEL... 449
49 -18.1001ati_A mol:protein length:505 GLYCYL-TRNA SYNTHETASE  ali model follow..  14  98........RLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWTPPR-NMMFQDLRGPRGGRGLLAYLRPETAQGIFVNFVLDATSRKLGFGIAQIGKAFRNETPRNFRVREFEQMEIEYFVRPGEDEYRYWVEERLKWWQEMGLSRENLVPYQQPP-------------ESSAHYAKATVDILYRFPHG-----LELEGIAQRTDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVL-------------------------------------KLKPQLAPIKVAVIPLRPEITEYAKRLKARLLALGLGRVLYEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSTVTVRDRDTMEQIRLHVDELEGFLRE.... 501
50 -17.3001v95_A mol:protein length:130 Nuclear receptor coactivator 5  ali model follow..  18  4..............................................................................................................................................................................................................................................................................................................................................................GSSGPVDCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFLNTELSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQENMPQADAMVLVARN... 104
51 -15.3002pme_A mol:protein length:693 Glycyl-tRNA synthetase  ali model follow..  13  90.........................VSGLYDFGPVGCALKNNIIQTWRQHFQEEQILEIDCTMLTPEPVLKTS--SEMESVLAQLDNYGQQELALRPETALNFKRLLEFNQGKL--PFAAAQIGNSFRNESPRSGRVREFTMAEIEHFVDPSEKDHPKFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAIC---------------DECYITEMEMLLNEKGEFTIETEG-NVKRFQKTLYVEEVVPNV--SFGLGRIMYTVFEHTFHVREGDEQRTFFLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTTATLRDRDSMRQIRAEISELPSIVQD.... 654
52 -13.0003p8t_A mol:protein length:294 AsnS-like asparaginyl-tRNA synthetase related protein  ali model follow..  12  15....................................IDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRPAEVDVYGVRMLTHSMILHKQLAIAMGLE--------KIFVLSPNIRLESRRKDDGREFTQLDFEIEGAK------DVMRLIEELI----------------YGLFRKAEEWTGFPRARHFKVYDYKDILEEFGSDEKASMEMEEPFWIVNIPREFYDREENGVWKNYDEVSSGGEREWEYEKIVAKIRAAGLKED-----------------------------------SFRPYLEIARAGKLKPSAGAGIGVERLVRFI........................................................................................................... 272
53 -13.0003g1z_A mol:protein length:326 Putative lysyl-tRNA synthetase  ali model follow..  12  15..................................PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQA-TVTDIHLFPFETRFVGPGHSQGINLYLMTSPEYHMKRLLAAGCG------PVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCQPAESLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIY-ASQASLAQISTEDHRVAERFEVYYKGIE-------------LANGFHELTDAREQQQRFEQDNRKRAARGL-QNLLDALAAGLP-DCSGVALGVDRLVMLALGAESLADV.................................................................................................. 318
54 -12.8003i7f_A mol:protein length:548 Aspartyl-tRNA synthetase  ali model follow..  13  244....................................FRIQSACCGLFREFLTSQKFVEIHTPKLIGCSS-------EGGSNIFEV-KYFDRKAYLAQSPQLYKQMAIMGD--------KVFEVGPVFRAENSNTRRHTEFEGLDIEMEIVENYH---ECIDVMEKLFTFI-------------DEIPKRFPDELKVIRKQYPFEDLIYRPFLRLTYKEAIEMLRASGETIGDYDDFTTPQEVKLGELIKAKYNTDFYILDKFPAAIRPFYTMPDID----DPNYSNSYDVFVR------------QEITSGAQPEFLMKRCIEKGSWPHAGCGIGLERITMLYLGIPNIRK................................................................................................... 535
55 -12.7005w25_A mol:protein length:616 Aspartate--tRNA(Asp/Asn) ligase  ali model follow..  14  120LGECAPLPFQLDEPAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETP------TITRSTPEGARDFLVPARLHPGSFYAL-PQSPQLFKQLLMVAGME-----RYYQIARCYRDEDFRADRQPEFTQLDMEM----SFVDAEDIIAISEEVLTELWALIGYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLELVECTDLVAEDGTLGGPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEINRLGLIDPDAWAFVWVVDPPLFEADAYDIVCNGHEI----GGGKFGFLLEAFMFGAP-PHGGIAFGWDRTTALLAGMDSIR------EVIAFPKTGGGVDPLTDAPAPITAQQRK.................................................................. 596
56 -12.7001nnh_A mol:protein length:294 asparaginyl-tRNA synthetase-related peptide  ali model follow..  12  15....................................LDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGEGMEPAEVEIYGVKMLTHSMILHKQLAIAMGLK--------KIFVLSPNIRLESRQKDDGREFTQLDFEVERAK------DIMRLIERLVYGL-----------------------FRKAEEWTGREFPKTKRFEVFEYSEVLEEFGSDEKASQEMEEPFWIINIPRLPYGYGEVASGGEREWEYEKIVAKIRKAGLNE---------DSFRPYLEI------------------KAGKL----------PSAGAGIGVERLVRFI........................................................................................................... 272
57 -12.7001efw_A mol:protein length:580 ASPARTYL-TRNA SYNTHETASE  ali model follow..  11  117.........EEEKEASEELRLKYRYLDLRRRRMQENLRLRHRVIKAIWDFLDREGFVQVETP------FLTKSTPEGARDFLVPYRHEPGLFYAL-PQSPQLFKQMLMVAGLD-----RYFQIARCFRDEDLRADRQPDFTQLDLEM----SFVEVEDVLELNERLMAHVFREALGVELPLPFPRLSEEAMERYGSDKPDLRFGLELKEVGPLFRQSGFRVFQEAESVKEPVREALLQATEARPGDTLLFVAGPRKVAATALGAVRLRAADLLGLKREGFRFLWVVDFPLLEALAYDLVLNGVE---VGGGSKFGFFLEALEYGAP-PHGGIAWGLDRLLALMTGSPSIR------EVIAFPKNKEGKDPLTGAPSPVPEEQLR.................................................................. 571
58 -12.6004wj3_M mol:protein length:599 Aspartate--tRNA(Asp/Asn) ligase  ali model follow..  13  121..............VGEETRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETP------ILGRPTPEGARDYLVPSRTYPGHFFAL-PQSPQLFKQLLMVAGFD-----RYYQIAKCFRDEDLRADRQPEFTQIDIET----SFLDESDIIGITEKMVRQLFKEVLDVEFDEFPHMPFEEAMRRYGSDKPDLRIPLELVDVADQLKEVEFLQSPIVKFIPEANLNVILDRVGAVDGDIVFFGADKAKIVCDALGALRIKVGHDLKLLTREWAPMWVVDFPMFESRAYDMVLNGTEL----GGGKFGFLLDALKYGAP-PHGGLAFGLDRLVMLMTGASSIR------EVIAFPKTQSAGDVMTQAPGSVDGKALR.................................................................. 580
59 -12.5003a5y_A mol:protein length:345 Putative lysyl-tRNA synthetase  ali model follow..  13  28..................................PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQA-TVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCG------PVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEIDPLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVY-ASQASLAQISTEDHRVAERFEVYYKGIE-------------LANGFHELTDAREQQQRFEQDNRKRAARGL-QNLIEALKVGMP-DCSGVALGVDRLVMLALGAETLAEV.................................................................................................. 331
60 -12.4004o2d_A mol:protein length:620 Aspartate--tRNA ligase  ali model follow..  14  117LGESAPLPFQLDEQAGEEARLKYRYLDLRREGPGNALRLRSKVNAAARSVLAEHDFVEIETP------TLTRSTPEGARDFLVPARLQPGSFYAL-PQSPQLFKQLLMVAGME-----RYYQIARCYRDEDFRADRQPEFTQLDMEM----SFVEADDVIAISEQVLKAVWATIGYDLPLPLPRISYEEAMRRFGSDKPDLRFGIELVECTELVGEDGTLGGPVAKNLSDAERDGLVAHVGANPGDCIFFAAGPAKGARALLGATRIEIKRLDLIDPNAWAFTWVVDFPMFESDAYDIVCNGNEI----GGGKFGFLLDAFSYGAP-PHGGIAFGWDRITALLAGVDSIR------EVIAFPKSGGGVDPLTDAPAPITPQQRK-ESGIDAKPREDKPKEDAKSKA............................................ 614
61 -12.4001eqr_A mol:protein length:590 ASPARTYL-TRNA SYNTHETASE  ali model follow..  13  102INRADVLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETP------MLTKATPEGARDYLVPSRVHKGKFYAL-PQSPQLFKQLLMMSGFD-----RYYQIVKCFRDEDLRADRQPEFTQIDVET----SFMTAPQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFINSPVAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVKDLGLTDESKWAPLWVIDFPMFEDDGYDMVINGYEV----GGGKFGFLLDALKYGTP-PHAGLAFGLDRLTMLLTGTDNIR------DVIAFPKTTAAACLMTEAPSFANPTALA.................................................................. 577
62 -12.2005x6c_A mol:protein length:553 O-phosphoserine--tRNA(Cys) ligase  ali model follow..  12  135..........................................DIDEEKKERLREVLHLYKKGAIDGDDLVFEIAKALNVSNEFKDLKPESTTLTLRSHMTSGWFITLSSLIKKRKLPLKLFSIDRCFRREQEDRSHLMSYHSASCVVVGEDVSVDD--GKVVAEGLLAQFGFTKFKFKPDEKKSKYYTPETQ---------------TEVYAYHPKLGEWIEVATFGVSPIALAKYNIDVPVMNLGLGVERLAMIIYGYEDVRAMVY-----QFYEYRLSDRDIAGMIRVFANELIDICIANKDKESPCSVEVKREFNFNGERRVIKVEI---FENEPNKKLLGPSVLNEVYVYDGNIYGIPPTFEGVKEQYPILKKAKEEGVSTNIRY------DGIIYKLVAKIEEALVSNVDEFK---FRVPIVRSLSDINLKIDELALKQENKVI. 538
63 -12.2004rmf_A mol:protein length:609 Aspartate--tRNA(Asp/Asn) ligase  ali model follow..  15  101LGESAPLPFQLDEQAGEEARLKYRYLDLRREGPGNALRLRSKVNAAARSVLAEHDFVEIETP------TLTRSTPEGARDFLVPARLQPGSFYAL-PQSPQLFKQLLMVAGME-----RYYQIARCYRDEDFRADRQPEFTQLDMEM----SFVEADDVIAISEQVLKAVWATIGYDLPLPLPRISYEEAMRRFGSDKPDLRFGIELVECTELVGEDGTLGGPVAKNLSDAERDGLVAHVGANPGDCIFFAAGPAKGARALLGATRIEIAKR---DTFDSDPGNALSDAY------DIVCNGNEI----GGGKFGFLLDAFSYGAP-PHGGIAFGWDRITALLAGVDSIR------EVIAFPKSGGGVDPLTDAPQQRKESGIDAKPREDKPKEDAKSKAAAA............................................... 601
64 -12.1002g4c_A mol:protein length:474 DNA polymerase gamma subunit 2  ali model follow..  77..........................GCHPGFGPLGVELRKNLAAEWWTVVFREQVFPVDALHHKPGPLLPGDSAFRLEQLVTFLENVLKTSGKLRENLLHGALEHYCLDLVNKRLPYGLAQIGVCFHPVFDTKQSIGEKTEASLVWFTPPRTSNQDFWLRHRLQWWRKFAMSPSNFSSS-----------------------------DCQDEEGRKGNKLYYNFPWGKELIETLWNLGDH-ELLHMYPGNVSKLHGRDGRKNVVPCV----LSVNGDLDRGML-------AYLYDSFQLTENSFTRKKNLHRKVL--------------------KLHPCLAPIKVALDVGRGPT-------LELRQVCQGLFNELLENGISVYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRSRDTTMKEMMHISKLKDFLIK.... 460
65 -12.0005c51_B mol:protein length:485 DNA polymerase subunit gamma-2, mitochondrial  ali model follow..  94..........................GCHPGFGPLGVELRKNLAAEWWTVVFREQVFPVDALHHKPGPLLPGDSAFRKEQLVAFLENVLKTSGKLRENLLHGALEHYCLDLVNKRLPYGLAQIGVCFHPVFDTK-SIGEKTEASLVWFTPPRTSNQDFWLRHRLQWWRKFAMSPSNFSSS-----------------------------DCQDEEGRKGNKLYYNFPWGKELIETLWNLGDH-ELLHMYPGNVSKLHGRDGRKNVVPCV----LSVNGDLDRGML-------AYLYDSFQLTENSFTRKKNLHRKVL--------------------KLHPCLAPIKVALDVGRGPT-------LELRQVCQGLFNELLENGISVYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRSRDTTMKEMMHISKLKDFLIK.... 477
66 -11.9001x54_A mol:protein length:434 Asparaginyl-tRNA synthetase  ali model follow..  13  135....................................MKVKETLIMAAREWLLKDGWHEVFPPILV-------TGAVEGGATLFKL-KYFDKYAYLSQSAQLYLEAAIFGLE-------KVWSLTPSFRAEKSRTRRHTEFWHLELEAAWMD------DIMKVEEELVSYM-------------QRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAIDILQSKGVNVEWGDDLGADEERVLTEEFDRPF---YGYPKHIKAFYMKEDPNDPRKVLASDMLAPEGYGEIIGGSQREDDYDKLLNRILEEGDYEWYLDLR----SVPHSGFGLGVERLVAWVLKLDHIRW................................................................................................... 421
67 -11.8004ztu_B mol:protein length:472 DNA polymerase subunit gamma-2, mitochondrial  ali model follow..  71...........................CHPGFGPLGVELRKNLAAEWEQVFPVDALHHKPGPLLPGDSAFRLVSAETLREIL-FLENVLKTSGKLRENLLHGALEHYCLDLVNKRLPYGLAQIGVCFHPVFDTK-SIGEKTEASLVWFTPPRTSNQDFWLRHRLQWWRKFAMSPSNFSSS-----------------------------DCQDEEGRKGNKLYYNFPWGKELIETLWNLGDH-ELLHMYPGNVSKLHGRDGRKNVVPCV----LSVNGDLDRGML-------AYLYDSFQLTENSFTRKKNLHRKVL------------------------------KLHPCLAPIKVALDVGTLELRQVCQGLFNELLENGISVYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRSRDTTMKEMMHISKLKDFLIK.... 453
68 -11.8003m4p_A mol:protein length:456 Asparaginyl-tRNA synthetase, putative  ali model follow..  11  156....................................LQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQC-------EGGSTLFKLQYFNEPALTQSSQLYLESVIASLG---------KSFCMLSSYRAEQSRTVRHAEYLHLEAELPFIS------DLLNHLEDLVCT----------------VIDNVMAVHGDKIRKMNPHLKLPTRFKRMTYADAIKYCNDHGILNKDKPFEYGEDISEKPERQMTDEIGCPIFMIHFPSKMKAFYMSKVPG----HPDLTESVDLLMPGVGE----------IVGGSNYDELMGAYKANGSCPHGGYGLGVERLVMWLLGEDHIRK................................................................................................... 443
69 -11.4004j15_A mol:protein length:521 Aspartate--tRNA ligase, cytoplasmic  ali model follow..  12  210....................................FRLQSGICHLFRETLINKGFVEIQTPKII-------SAASEGGANVFTV-SYFKNNAYLAQSPQLYKQMCICAD--------KVFSIGPVFRAEDSNTHRH-EFVGLDIEMAFNYHYH---EVMEEIADTMVQI-------------KGLQERFQTEIQVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMPDPR----NPKQSNSYDMFMR------------EEILSGAQPQLLTERALHHGAPPHAGGGIGLERVTMLFLGLHNVRQT.................................................................................................. 503
70 -11.3001asy_A mol:protein length:490 ASPARTYL-tRNA SYNTHETASE  ali model follow..  12  181....................................FRIQAGVCELFREYLATKKFTEVHTPKLLGAP---SEGGSSVFEVTY------KGKAYLAQSPQFNKQQLIVAD--------RVYEIGPVFRAENSNTHRHTEFTGLDMEMAFEEHYH---EVLDTLSELFVFI-------------PKRFAHEIELVRKQYPVEEFKLPKDGKMVRLTYKEGIEMLRAAGKEIGDFEDLSTENEKFLGKLVRDKYDTDFYILDKFPLEIRPFYTMPDPA----NPKYSNSYDFFMR------------EEILSGAQHALLQERMKAHGCPPHAGGGIGLERVVMFYLDLKNIRR................................................................................................... 477
71 -11.3001g5h_A mol:protein length:454 MITOCHONDRIAL DNA POLYMERASE ACCESSORY SUBUNIT  ali model follow..  10  9.ADGTQQPDAPEHAVAREALVDLCRRRHF-RFGPLGVELRKNLASQWWSVVFREQVFAVDSLHQEPGSSQPRDSAFRLEQLVAFLENLLKTSGKLRATLLHGALEHYCLDLVNRKLPFGLAQIGVCFHPVSNSN-RVGEKTEASLVWFTPTRTSSQDFWLRHRLLWWRKFAMSPSNFSSA-----------------------------DCQDELGRKGSKLYYSFPWGKEPIETLWNLGDQ-ELLHTYPGNVSTIQGRDGRKNVVPCV----LSVSGDVDLGTL-------AYLYDSFQLAENSFARKKSLQRKVL--------------------KLHPCLAPIKVALDVGKGPT-------VELRQVCQGLLNELLENGISVWPGYVHSSLEQLHSKYDEMSVLFSVLVTETTLENGLIQLRSRDTTMKEMMHISKLRDFLVK.... 435
72 -11.3006aqh_A mol:protein length:508 Lysine--tRNA ligase  ali model follow..  12  179..................................KVARQRIAVMRAIRSALERRGFLEVETPMLQTL------AGGAAARPFVTHSNALDTELYLRIAPELFLKRCLVGGFE------RVFELNRVFRNEGADSTHSPEFVMLET------QAYGTYDSAVVTRELIQEVADEVYDLDGEWESIQMYPSLSEALGEEITPDTPAETLWAIADRLGLDKLVEELWEHTVGAKLWAPTFVKDFPVETTPLTRSHRSIPGVTEKWDLYVRRIEAAGDDEAMALDEDFLAALEY-------------------------------------PSTGTGMGIDRLMMTLTGLSI...................................................................................................... 490
73 -11.2005vl1_A mol:protein length:506 Lysine--tRNA ligase  ali model follow..  12  176..................................EVARQRIAVIRAVRNALERRGFLEVETPMLQTL------AGGAAARPFVTHSNALDIDLYLRIAPELFLKRCIVGGFD------RVFELNRVFRNEGSDSTHSPEFSMLET------QTYGTYDSALITRELIQEVADEVYDIDGEWATMEMYSSLSEALGEQITPETTVARLRDIASGLDVEKLVEELWEHAVGNKLTAPTFVKDFPVETTPLTRQHRSIPGVTEKWDLYVRGVEAAGDDEAMQLDEDFLTALEY-------------------------------------PCTGTGMGIDRLLMCLTGLSI...................................................................................................... 486
74 -11.2005eln_A mol:protein length:535 Lysine--tRNA ligase  ali model follow..  12  184..................................KVFKLRSRAIKYIRNYFDRLGFLEVETPMLNMI------YGGAAARPFITYHNELETQLYMRIAPELYLKQLIVGGLD------KVYEIGKNFRNEGIDLTHNPEFTAMEFEIHGSLDFTTPWKRFSFVEEIESGLGEKLKRPLDSQENIDFMVEMCEKHEIELPHPRTAAKLLDKLAGHFVETKCTNAKWHREKPEMTERFELFVLGKELCNAYTELNEPLQQRKFFEQQAD-AKASGDVEACPIDETFCLALEH-------------------------------------PTGGWGLGIDRLIMFLADKNNIKE................................................................................................... 506
75 -11.0003a74_A mol:protein length:493 Lysyl-tRNA synthetase  ali model follow..  14  172..................................KTFITRSLIIQSMRRYLDSHGYLEVETPMMHAV------AGGAAARPFITHHNALDMTLYMRIAIELHLKRLIVGGLE------KVYEIGRVFRNEGISTRHNPEFTMLELDIMKLTENLIAHIATEVLGTTKIQYGEHLVDLTPEWRRLHMVDAIKEYVGVDFWRQMSDEEARELAKEHGVEHIVNEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNPDDPRFTDRFELFIVGREEQGNDEAHEMDEDFLEALEY-------------------------------------PTGGLGIGVDRLVMLLTNSPSIRD................................................................................................... 483

FFAS is supported by the NIH grant R01-GM087218-01
1 2 7 4 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sasin JM, Godzik A, Bujnicki JM. SURF'S UP! - protein classification by surface comparisons. J Biosci. 2007 Jan;32(1):97-100.