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Query: 3rhu_A mol:protein length:160 SC_1wnu, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst SYSIEVRTHSALHVVKGAVVKTAGSDAKWTTSTYVKGNKGVLIVKAALEPDKWGIAAIEALANEKVKENAPIKIYELPREEAEKMFGEDMYDLFPVPEDVRILKVVVIEDWNVNACNKEHTKTTGEIGPIKIRKVRFRKSKGLLEIHFELLELELast
1 -103.0003rhu_A mol:protein length:160 SC_1wnu  ali model  100  1SYSIEVRTHSALHVVKGAVVKTAGSDAKWTTSTYVKGNKGVLIVKAALEPDKWGIAAIEALANEKVKENAPIKIYELPREEAEKMFGEDMYDLFPVPEDVRILKVVVIEDWNVNACNKEHTKTTGEIGPIKIRKVRFRKSKGLLEIHFELLELE 154
2 -100.0003rfn_A mol:protein length:159 BB_1wnu_001  ali model follow..  96  1.YSIEVRTHSALHVVKGAVVKAAGSAAKWTTSTYVKGNKGVLIVKAALELDKWAWAAMEALANEKVKENAPIKIYELPREEAEKMFGEDMYDLFPVPEDVRILKVVVIEDWNVNACNKEHTKTTGEIGPIKIRKVRFRKSKGLLEIHFELLELE 153
3 -95.4001v7o_A mol:protein length:165 alanyl-tRNA synthetase  ali model follow..  90  2.YSIEVRTHSALHVVKGAVVKVLGSEAKWTYSTYVKGNKGVLIVKFDRKPSDEEIREIERLANEKVKENAPIKIYELPREEAEKMFGEDMYDLFPVPEDVRILKVVVIEDWNVNACNKEHTKTTGEIGPIKIRKVRFRKSKGLLEIHFELLELE 154
4 -60.7003kew_A mol:protein length:241 DHHA1 domain protein  ali model follow..  22  91.RFDGMQQHLGQHLLSGCFYDLFGAN---TCGFHLGKEISTVDIVG--FLDEKTIREAEKEANRLIFENLEVKSYAPSKKELKKVKTRRAL-----PKTDEEIRIVEIVGLDLNACCGVHPRNTRDLQVIKIRRWE--KHKNATRIEYVAGNR. 230
5 -58.7002zze_A mol:protein length:752 Alanyl-tRNA synthetase  ali model follow..  31  606.RIQHMRHHTGTHVLMGALVRVLGRHV-WQAGSQLTTDWARLDISHYKRISEEELKEIEMLANRIVMEDRKVTWEWLPRTTAEQKYGFRLYQGG--VVPGREIRVVKIEDWDVQACGGTHLPSTGLVGPIKILR-TERIQDGVERIIFACGE.. 752
6 -57.2002e1b_A mol:protein length:216 216aa long hypothetical alanyl-tRNA synthetase  ali model follow..  22  92.RYKLMRIHTGLHLLEHVLNEVLGEGNWQLVGSGMSVEKGRYDIAYPENLN-KYKEQIISLFNKYVDEGGEVKI-----------------------WWEGDRRYTQIRDFEVIPCGGTHVKDIKEIGHIKKLKRS-SIGRGKQRLEMWL.... 215
7 -49.8003wqy_A mol:protein length:906 Alanine--tRNA ligase  ali model follow..  32  593.RWRHMRHHSATHVLLYSLQKVLGNHV-WQAGARKEFSKARLDVTHFRRPSEEEIKEIEMLANREILANKPIKWEWMDRIEAERKFGFRLYQGG--VPPGRKIRVVQV-GDDVQACGGTHCRSTGEIGMLKILK-VESIQDGVIRFEFAAGEA. 739
8 -24.8004v1a_c mol:protein length:334 MITORIBOSOMAL PROTEIN ML39, MRPL39  ali model follow..  11  141........RSCAMMMGCVIERAFKDEYVVSLVRAPEVPVIAGAFLDEWMPTKENLHSFTKDARALIYKDLPFETLEVEAKVALEIFQHNKYKLDFIEEKASIVKLHRFGDF-IDVSEGPLIPRTSICFQYEVSAVHNLQTQSVRRFQGLSLPVH 301
9 -20.1003j7y_7 mol:protein length:338 mL39  ali model follow..  11  144........RSCAMMMGCVIERAFKDEYMVNLVRAPEVDVVLDSKLDEWMPTKENLRSFTKDAHALIYKDLPFETLEVEAKVALEIFQHSKYKVDFIEEKASQVKLHRIGDF-IDVSEGPLIPRTSICFQYEVSAVHNLQPTQPSLIRRFQG... 299
10 -18.6001qf6_A mol:protein length:642 THREONYL-TRNA SYNTHETASE  ali model follow..  16  73........HSCAHLLGHAIKQLWPH--TKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANR---LDENIAHDDKPGLYFHEEY-VDMCRGPHVPNMRFCHHFKLMKTAGAYWRGLQRIYGTAWADK 226
11 -15.4001nyq_A mol:protein length:645 threonyl-tRNA synthetase 1  ali model follow..  19  75........HSTAHLMAHAIKRLYGN--VKFGVGPVIEGGFYYDFDIDQNISSDDFEQIEKTMKQIVNENMKIERKVVSRDEAKELFSNDEYKLELIDAIPENVTLYSQGDF-TDLCRGVHVPSTAKIKEFKLLSTAGAYWRGDSN......... 210

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Slabinski L, Jaroszewski L, Rychlewski L, Wilson IA, Lesley SA, Godzik A. XtalPred: a web server for prediction of protein crystallizability. Bioinformatics. 2007 Dec 15;23(24):3403-5. Epub 2007 Oct 5.