current user: public

Please be advised that we have recently moved our server to a new location. We tried our best to fully test all functions on the website, but if something does not work for you please let us know.

Query: 4dyj_A mol:protein length:409 broad specificity amino acid racemase, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .
# Score Template Links and tools%idFirst MPFRRTLLAASLALLITGQAPLYAAPPLSMDNGTNALTVQNSNAWVEVSASALQHNIRTLQAELAGKSRLCAVLKADAYGHGIGLVMPSIIAQGVPCVAVASNEEARVVRASGFTGQLVRVRLASLSELEDALQYDMEELVGSAEFARQVDAIAARHGKTLRIHMALNSSGMSRNGVEMATWSGRGEALQITDQKHLKLVALMTHFAVEDKDDVRKGLAAFNEQTDWLIKHAKLDRSKLTLHAANSFATLEVPEARLDMVRTGGALFGDTVPARTEYQRAMQFKSHVAAVHSYPAGNTVGYDRTFTLARDSRLANITVGYSDGYRRVFTNKGHVLINGHRIPVVGKVSMNTLMVDVTDFPDVKGGNEVVLFGKQAGGEITQAEMEEINGALLADLYTVWGSSNPKILVDLast
1 -121.0004dyj_A mol:protein length:409 broad specificity amino acid racemase  ali model  100  1MPFRRTLLAASLALLITGQAPLYAAPPLSMDNGTNALTVQNSNAWVEVSASALQHNIRTLQAELAGKSRLCAVLKADAYGHGIGLVMPSIIAQGVPCVAVASNEEARVVRASGFTGQLVRVRLASLSELEDALQYDMEELVGSAEFARQVDAIAARHGKTLRIHMALNSSGMSRNGVEMATWSGRGEALQITDQKHLKLVALMTHFAVEDKDDVRKGLAAFNEQTDWLIKHAKLDRSKLTLHAANSFATLEVPEARLDMVRTGGALFGDTVPARTEYQRAMQFKSHVAAVHSYPAGNTVGYDRTFTLARDSRLANITVGYSDGYRRVFTNKGHVLINGHRIPVVGKVSMNTLMVDVTDFPDVKGGNEVVLFGKQAGGEITQAEMEEINGALLADLYTVWGSSNPKILVD 409
2 -115.0004dza_A mol:protein length:407 lysine racemase  ali model follow..  47  2..SLGIRYLALLPLFVITACQQPVNYNPPATQVAQVQPAIVNNSWIEISRSALDFNVKKVQSLLGKQSSLCAVLKGDAYGHDLSLVAPIMIENNVKCIGVTNNQELKEVRDLGFKGRLMRVRNATEQEMAQATNYNVEELIGDLDMAKRLDAIAKQQNKVIPIHLALNSGGMSRNGLEVDNKSGLEKAKQISQLANLKVVGIMSHYPEEDANKVREDLARFKQQSQQVLEVMGLERNNVTLHMANTFATITVPESWLDMVRVGGIFYGDTIA-STDYKRVMTFKSNIASINYYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSNAGHALIAGQRVPVLGKTSMNTVIVDITSLNNIKPGDEVVFFGKQGNSEITAEEIEDISGALFTEMSILWGATNQRVLVD 407
3 -113.0004bf5_A mol:protein length:417 ALANINE RACEMASE  ali model follow..  55  5............TLLATLILGLLAGQAVAAPYLPLASDHRNSNAWLEVDLGAFEHNIQTLKDRLGDGPKICAIMKADAYGHGIDLLVPSVVKAGIPCIGIASNEEARVAREKGFTGRLMRVRAATPAEVEQALPYKMEELIGSLVSAQGIADIAQRHHTNIPVHIALNSAGMSRNGIDLRLADSKEDALAMLKLKGITPVGIMTHFPVEEKEDVKMGLAQFKLDSQWLLEAGKLDRSKITIHAANSFATLEVPDAYFDMVRPGGLLYGDSIPSYTEYKRVMAFKTQVASVNHYPAGNTVGYDRTFTLKRDSWLANLPLGYSDGYRRALSNKAYVLIQGQKVPVVGKTSMNTIMVDVTDLKGVKPGDEVVLFGRQGEAEVKQADLEEYNGALLADMYTIWGYTNPKKIKR 408
4 -112.0004beu_A mol:protein length:392 ALANINE RACEMASE  ali model follow..  50  7..............................TALPDAAQIQQSNSWLEISLGQFQSNIEQFKSHMNANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNAEARAVRESGFKGELIRVRSASLSEMSSALDLNIEELIGTHQQALDLAELAKQSGKTLKVHIALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKESSTWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNP-EYPSIVSFKTRVSSLHHLPKDSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGNKAEVLINGQRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELIFPELYTLWGTSNPRFYVK 384
5 -108.0004y2w_A mol:protein length:388 Alanine racemase 1  ali model follow..  27  4......................................DGVRPTRVEVYLDAITHNFREIKKIVGKNVKIMAVIKGDAYGHGASYVAKFLEKEGVDYFGVATTEEALELREKGIKTPILIFGYTPPTQLRQIVKHDLTQTVYDIKYAKELEKESLKQNKRAKVHIKIDT-GLGRIGYIDFD-LAQKEILEMANMRGLILEGIYSHFAAASEDDRDYCKEQFDKFMNLISSLEKKRLKIPLKHIANAAAILNLNYSHLDMVRPGIILFGAYPSKRVELRETLRFTTRVVHLKDVPAGFFIGYGKSFVTKRKSVIATIPVGYADGLDRRLSNNYKLLLKGKYVPIVGRVCMDQCMIDVTDVEGVEIGDEVVIIGTQNNETVSVESMADKIETIPQEVFSRISRRVPRVYFY 376
6 -107.0001vfh_A mol:protein length:386 alanine racemase  ali model follow..  26  1....................................MNETPTRVYAEIDLDAVRANVRALRARA-PRSALMAVVKSNAYGHGAVPCARAAQEAGAAWLGTATPEEALELRAAGIQGRIMCWLWTPGGPWREAIETDIDVSVSGMWALDEVRAAARAAGRTARIQLKADT-GLGRNGCQPADWAELVGAVAAQAEGTVQVTGVWSHFACADEPGHPSIRLQLDAFRDMLAYAEKEGVDPEVRHIANSPATLTLPETHFDLVRTGLAVYGVSPSPELGLRPAMTLRASLALVKTVPAGHGVSYGHHYVTESETHLALVPAGYADGIPRNASGRGPVLVAGKIRRAAGRIAMDQFVVDLGE-DLAEAGDEAVILGDAERGEPTAEDWAQAAHTIAYEIVTRIGGRVPRVYLG 377
7 -107.0001xfc_A mol:protein length:384 Alanine racemase  ali model follow..  29  1................................MTPISQTPGLLAEAMVDLGAIEHNVRVLREHA-GHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDT-GLNRNGVGPAQFPAMLTLRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPAMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYRE 380
8 -106.0004ecl_A mol:protein length:374 Serine racemase  ali model follow..  28  1.....................................TADTDRAYLEINLNNLEHNVNTLQKAMSPKCELMAVVKAEAYGHGMYEVTTYLEQIGVSSFAVATIDEGIRLRKYGISSEILILGYTSPSRAKELCKYELTQTLIDYRYSLLLN----KQGYDIKAHIKIDT-GMHRLGFSTEDKD---KILAAFSLKHIKVAGIFTHLCAADENDVAFTNKQIGSFYKVLDWLKSSGLNIPKVHIQSSYGLLNYPELECDYIRVGVALYGVLSSTNLDLRPVLSLKAKVVLIRKIKQGESVGYSRAFTATRDSLIAILPIGYADGFPRNLSGNSYVLIGGRQAPIVGKICMDQLAVDVTDIPNVKTGSIATLIGKDGKEEITAPMVAESAESITNELLSRMGHRLNIIR.. 372
9 -105.0005irp_A mol:protein length:394 Alanine racemase 2  ali model follow..  27  1....................................MIKLCREVWIEVNLDAVKKNLRAIRRHIPHKSKIMAVVKANGYGHGSIEVARHALEHGASELAVASVEEGIVLRKAGITAPILVLGFTSLSCVKKSAAWNITLSAFQVDWMKEANEILEKEANRLAIHINVDT-GMGRLGVRTKE-ELLEVVKALKASKFLRWTGIFTHFSTADEPDTTLTKLQHEKFISFLSFLKKQGIELPTVHMCNTAAAIAFPEFSADMIRLGIGLYGLYPSAYVKLEPALSLKARIAYVKTMRTPRTVSYGATYIAEPNEVIATLPIGYADGYSRALSNRGFVLHRGKRVPVAGRVTMDMIMVSLGENGEGKQGDEVVIYGKQKGAEISVDEVAEMLNTINYEVVSTLSRRIPRFYIR 380
10 -105.0003e5p_A mol:protein length:371 Alanine racemase  ali model follow..  22  1...................................MVVGWHRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCVALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEALQQLTPESNTPLRVHLKVDT-GMGRIGFLTPE-ETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQAGRFKAVLAVLEELP---RYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNYALKPALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQG-FTVLVNGKRCEIVGRVCMDQCMIRLAE--EVPVGPVVTLVGKDGNEENTLQMVAEKLETIHYEVACTFSQRIPREY.. 370
11 -104.0005fac_A mol:protein length:410 Alanine racemase  ali model follow..  25  5......................SGLVPRGSETTARRDADAVLRARAEIDLAALRANVRALRERA-PGAALMAVVKADAYGHGAIPCARAAVAAGATWLGTATPQEALALRAAEPGLPIMCWLWTPGGPWREAVEARLDVSVSAMWAMEEVTGAARAAGVPARVQLKADT-GLGRGGCQPGA-RLVGAALRAEEEGLLRVTGLWSHFACADEPGHPSIAAQLTRFREMTAYAEQRGLRPEVRHIANSPATLTLPDAHFDLVRPGIAMYGVSPSPEFGLRPVMTLAASLALVKQVPGGHGVSYGHHYTTPGETTLGLVPLGYADGIPRHASSSGPVLVDGKWRTVAGRIAMDQFVVDLGGDR-PEPGAEAVLFGPGDRGEPTAEDWAQAAGTIAYEIVTRIGSRVPRVYVN 403
12 -103.0004lus_A mol:protein length:385 Alanine racemase  ali model follow..  25  1....................................MQKITVPTWAEINLDNLRFNLNNIKNLLEEDIKICGVIKADAYGHGAVEVAKLLEKEKVDYLAVARTAEGIELRQNGITLPILNLGYTPDEAFEDSIKNKITMTVYSLETAQKINEIAKSLGEKACVHVKIDS-GMTRIGFQPNE-ESVQEIIELNKLEYIDLEGMFTHFATADEVSKEYTYKQANNYKFMSDKLDEAGVKIAIKHVSNSAAIMDCPDLRLNMVRAGIILYGHYPSDDLELRPAMKLKSKIGHIKQVEPGVGISYGLKYTTTGKETIATVPIGYADGFTRIQKN-PKVLIKGEVFDVVGRICMDQIMVRIDKDIDIKVGDEVILFGEGE---VTAERIAKDLGTINYEVLCMISRRVDRVYME 372
13 -103.0002dy3_A mol:protein length:361 Alanine racemase  ali model follow..  25  2.........................................NLLTTKIDLDAIAHNTRVLKQMA-GPAKLMAVVKANAYNHGVEKVAPVIAAHGADAFGVATLAEAMQLRDIGISQEVLCWIWTPEQDFRAAIDRNIDLAVISPAHAKALIETD---AEHIRVSIKIDS-GLHRSGVDEQEWEGVFS--ALAAAPHIEVTGMFTHLACADEPENPETDRQIIAFRRALALARKHGLECPVNHVCNSPAFLTRSDLHMEMVRPGLAFYGLEPVAGLELKPAMTWEAKVSVVKQIEAGQGTSYGLTWRAEDRGFVAVVPAGYADGMPRHAQGKFSVTIDGLDYPQVGRVCMDQFVISLGDNPGVEAGAKAVIFGENG---HDATDFAERLDTINYEVVCRPTGRTVRAYV. 361
14 -103.0003ha1_A mol:protein length:397 Alanine racemase  ali model follow..  25  8.........................................RDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKGNAYGHDYVPVAKIALEAGATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQKEWVDEAIKLW-DGSSTMKYHINFDS-GMGRIGIRERK-ELKGFLKSLEGAPFLELEGVYTHFATADEVETSYFDKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQG-FEVLVNGKRVPIVGRVTMDQFMIHLPC--EVPLGTKVTLIGRQGDEYISATEVAEYSGTINYEIITTISFRVPRIFIR 375
15 -103.0001bd0_A mol:protein length:388 ALANINE RACEMASE  ali model follow..  24  1....................................MNDFHRDTWAEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPILVLGASRPADAALAAQQRIALTVFRSDWLEEASALY-SGPFPIHFHLKMDT-GMGRLGVKDEEETKRI-VALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTRFLHMLEWL---PSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIPLKEAFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQH-FHVLVDGQKAPIVGRICMDQCMIRLPG--PLPVGTKVTLIGRQGDEVISIDDVARHLETINYEVPCTISYRVPRIFFR 370
16 -102.0003uw6_A mol:protein length:390 Alanine racemase  ali model follow..  22  1....................................MNDFHRDTWAEVDLDAIYDNVENLRRLLPDDTHIMASVCGNAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPILVTGASRPADAALAAQQRIALTVFRSDWLEEASALY-SGPFPIHFHLYMDT-GMGSLGVKDEEETKRI-VALIERHPHFVLEGLWTWFATADEVNTDYFSYQYTRFLHMLEWLPS---RPPLVHCANSAASLRFPDRTFNMVQFGIAMYGLAPSPGIPLKEAFSLHSRLVHVKKLQPGEKVSFGATYTAQTEEWIGTIPIGYKDGWLRRLQH-FHVLVDGQKAPIVGRILGDMCMIRLPG--PLPVGTKVTLIGRQGDKVISIDDVARHLETINYEVPCTISYRVPRIFFR 370
17 -102.0003s46_A mol:protein length:367 Alanine racemase  ali model follow..  23  3.....................................ASPHRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAI-QDDVDGFCVSNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTG-LTVHLKIDS-GMGRIGFREASEVEQAQ--DLLQQHGVCVEGIFTHFATADEESDDYFNAQLERFKTILASMKE---VPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAYDLIPALTLESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS-VLVDGQACPIVGRVSMDQITIRLPKL--YPLGTKVTLIGSNGDKEITATQVATYRVTINYEVVCLLSDRIPREY.. 366
18 -100.0006g56_A mol:protein length:404 Alanine racemase 1  ali model follow..  22  11......................KGAVTSLYKKA-GFSDKYYRSAYMNVDLNAVASNFKVFSTLH-PNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEIKNISGEQEKKLWLHIKLDT-GMGRLGIKDTNTYQEV-IEIIQQYEQLVFEGVFTHFACADEPG-DMTTEQYQRFKDMV----NEAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVHLKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQG-SFVNVNGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNLSRRLPRIYHD 392
19 -100.0003oo2_A mol:protein length:385 Alanine racemase 1  ali model follow..  23  2.................................NAMSDKYYRSAYMNVDLNAVASNFKVFSTLH-PNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEIKNISGEQEKKLWLHIKLDT-GMGRLGIKDTKTYQEV-IEIIQQYEQLVFEGVFTHFACADEPG-DMTTEQYQRFKDMV----NEAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVHLKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQG-SFVNVNGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNLSRRLPRIYHD 373
20 -99.7003kw3_A mol:protein length:376 Alanine racemase  ali model follow..  23  1.......................GPGSMNKSAKDTANPLFPATAIATIDVRAIVANYRTLAQHVAP-TECSAVVKANAYGLGAHKIAPALYQAGCRTFFVAQIEEALQLKAVLPENVMIALNGFPHKAEEFVAQSGIIPLLNSWSTIEDWQTLCQKKNKKFPAIIQVDT-NMSRLGLDKKELQKLIK--NPTIFEKAEIKYILSHLANGEDASHSSNNKQLAAFKRVLAQLPTCK-----VSFANSGGIFLGSDFYFDLVRPGIALYGVDPHGKTPLKAVVKVEAQVLQSRFIDAGIPVGYRESFMTRRPSTLATISIGYADGWPRILSNKGTVYFNGHKLPIVGHISMDSIIVDATDLDKPQRGDWVELIGPH----QPLEKVSTDTNTIPHEILTSLGKRYKRIYI. 376
21 -99.1003co8_A mol:protein length:380 Alanine racemase  ali model follow..  22  3....................................LEAIHRSTRIEFSKSSLAYNVQYTKQVS-GAKTLWLAVKSNAYGHGLLQVSKIARECGVDGLAVSVLDEGIAIRQAGIDDFILILGPIDVKYAPIASKYHFLTTVSSLDWLKSADKILG--KEKLSVNLAVDT-GMNRIGVRSKKDLKDEIEFLQEHSDHFSYDGIFTHFASSDNPDDHYFQRQKNRWYELIDGLIM----PRYVHVMNSGAAMYHSKGCNSIARVGTVVYGVEPSEGVKLKPVFELKSALTFVKKIPAGEGISYGSKFVTSRDTWIGTLPIGYGDGWLAEYQD-FQLLIDGQKCRQVGQIAMDQMMVALPH--EYPIGTEVTLIGKSGKYENTLYDLHKHSGVPPWKITVAFSDRLKRMVVD 372
22 -97.4003hur_A mol:protein length:395 Alanine racemase  ali model follow..  22  3....................................LTAIHRPTWVSVDLDAAAHNLQEIREWT-KAKKVYAVLKADGYGLGAIPLAKAFQEASADALIVSNLDEALELRQADLTLPIWVLGAWDYSDLKLFIDHDIVITIPSLAWLQNLPDFE----GTLKVSLAIDT-GMTRIGFDKADEISAA-KKIIDKNPQLDLFSVYTHFATADEAGEKSKAYFEEQLRRWQELTINQGFDPSLFSMANSATCIWHPRISFAAIRPGQLISGVNVSNGLHLERIFSVCSEIADVRFVKKDQSLSYGASERMPEDGYVATLPFGYNDGWLRRMQK-SSVIINGKRMPIIGRITMDQTMVKLDR--KYPIGTRVTLIGKDGGEQITVEEVANYSHTIVDEIQTTLAPRIKRIYTG 376
23 -96.5004bhy_A mol:protein length:378 ALANINE RACEMASE  ali model follow..  26  2..........................DYDIPTTENLYFQSMKAAIAQINTAALRHNLAVVKRHA-PQCKIIAVVKANAYGHGLLPVARTLV--DADAYAVARIEEALMLRSCAVVKPIVLLGFFSAADLPVLAANNLQTAVHTWEQLEALEQAD--LPAPVVAWLKLDT-GMHRLGVRADEMPAFIERLAKCKN--VQPFNIMTHFSRSDELEQPTTREQIDLFSQLTAPLLG------ERAMANSAGILAWPDSHCDWVRPGVILYGVSPFPNYDLQPVMTLKTQLIAVRDHKAGEPVGYGANWVSDRDTRLGVIAIGYGDGYPRMAPNGTPVLVNGRIVPLVGRVSMDMTTVDLGPGATDKAGDEAVLWGEG----LPVERVADQIGTIPYELITKLTSRVFMEYV. 372
24 -93.1002rjg_A mol:protein length:379 Alanine racemase  ali model follow..  26  1.....................MGSSSSGLVPRGSHM-----QAATVVINRRALRHNLQRLRELA-PASKMVAVVKANAYGHGLLETARTLP--DADAFGVARLEEALRLRAGGITKPVLLLGFFDARDLPTISAQHFHTAVHNEEQLAALEEAS--LDEPVTVWMKLDT-GMHRLGVRPEQAEAFYH--RLTQCKNVQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKPG------QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEG----LPVERIAEMTKVSAYELITRLTSRVAMKYVD 373
25 -91.6002odo_A mol:protein length:357 Alanine racemase  ali model follow..  26  2.........................................RPARALIDLQALRHNYQLAREVTG--AKALAVIKADAYGHGAVRCAQAL-EAEADGFAVACIEEALELRAAGIRAPILLLGFFEADELPLIVEHDFWCVVHSLWQLDAIEQAR--LAKPIHVWLKLDS-GMHRVGLHPNDYKAAYQ--RLQASANVAKIVLMSHFARADELDCTRSVEQVAVFLGARADLTA------EISLRNSPAVLGWPRVPSDWVRPGLMLYGSSPFDESRLQPVMTLESKVICVRELPAGEPVGYGARFITPKPMRIGVVAMGYADGYPRQAPTGTPVFVDGVRSQLLGRVSMDMLCIDLTDVPQAGLGSTVELWGKN----ILASEVATAADTIPYQIFCNLK-RVPRLYSG 356
26 -91.1004qhr_A mol:protein length:356 Alanine racemase  ali model follow..  26  2.........................................RQATVYIDRQALQYNLNRVKQ-LAANSKIVSMVKANAYGHGVKDCLAAL--NASDAFGVACLQEGLEIRELGFEQPVTLIGVFSEDEMPVAIEQKFECVIHHQQQFEWLIKHKQAYAQGLKVWVKLNS-GMNRLGFKDPEIIEVIKTLKSEG----FTCVLAMHFANADV-DHPLNEQQKQQFLHIKETCD-----PILASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADLDLKPVMTFTAEIIALNHIEAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAYVKQNFVAIDGKLCPVVGRVSMDMIAIDVTNTQ-VKLGTQVELWGNH----RLVDDVAEANGTIGYELLCRLSSRPVRQG.. 355
27 -91.1001rcq_A mol:protein length:357 catabolic alanine racemase DadX  ali model follow..  27  2.........................................RPARALIDLQALRHNYRLAREATG--ARALAVIKADAYGHGAVRCAEAL-AAEADGFAVACIEEGLELREAGIRQPILLLGFFEASELELIVAHDFWCVVHCAWQLEAIERAS--LARPLNVWLKMDS-GMHRVGFFPEDFRAAHE--RLRASGKVAKIVMMSHFSRADELDCPRTEEQLAAFSAASQGLEG------EISLRNSPAVLGWPKVPSDWVRPGILLYGATPFERDRLRPVMTLESKVISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYPRHAADGTLVFIDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPN----VPVGALAAQFGSIPYQLLCNLK-RVPRVYSG 356
28 -89.8006a2f_A mol:protein length:358 Alanine racemase, biosynthetic  ali model follow..  27  2.........................................RPLVATVDLSAIRHNYALAKRCA-PQRQAFAVVKANAYGHGAREVVTAL-HDDADGFAVACLEEAAEVRALHASARILLLGCFEASEYALAGQLRLDLVIQGAEQGEAFL--AAGLDIPLNVWLKLDS-GMHRLGFDPAALRAWHA--RLRSHPGVRELNLISHFACADERNHPLTEQQLESFLGLL------DLDFDQRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLGLKPAMSLGAQLISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPRTAPAGTPVLVGGRRAILAGRVSMDMLAVDLSDLPEARVGDPVELWGAG----LSVDEVARACGTLGYELLSKVTARVPRRYSH 358
29 -47.4004kbx_A mol:protein length:388 Uncharacterized protein YhfX  ali model follow..  13  7....................LKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKRLIETARLY-GIELYLMTKQFGRNP-WLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRIQSVLLKVYS-DDDFLGFALKVLPEIVA--EIQNLPGLHLAGLTHFLLWDEAVGKVLPTPNLHTLIQARDQLAKSGIALEQLNAPSCTSLPLLAQYGVTHAEPGHALTGTIPAGDQPERIAMLWLSEISHHF---RGDSYCYGGGYYRRGHAQHALVFTPENQKI-----------------TETNLKTVDDSSIDYTLAGEFPVSSAVVLCFRT-------QIFVTRSDVVLVSGIHRGEPEIVGRYDS 381
30 -22.2003wqc_A mol:protein length:390 D-threo-3-hydroxyaspartate dehydratase  ali model follow..  14  17.............................................AVIDLDRMQRNIARMQQRMDAGVRLRPHVKT----SKSVPVAAAQRAAGASGITVSTLKEAEQFFAAGTT-DILYAVSMAPHRLPQALQ-DLKLIVDSVAAAQAIAAFGREQGEAFEVWIEIDT-DGHRSGVGADDTPLLLAIGRTLHDGGMRLGGVLTH-LDTPEALQALAERERAGCVQAAEALRAAGLPCPVVSVGSTPTALAASRLDVTEVRAGVYVF-RNIGVCAAEDVALSVLATVIGHQADKGWAIVDAGMAMSRDRGTARQKQDFGYGQVCDLQGRVMPGFVLTGANQE--GILARADGAAEADIATRFPLGTRLRIL...................................... 352
31 -21.4003anu_A mol:protein length:376 D-serine dehydratase  ali model follow..  12  15.............................................LTIDRTTARRNAERMRERCRAGVRLRPHVKT----HKTLEGGLLATGGTRRGIAVSTLAEARFFADGGFD-DILLAYPVPTARLEECAGLAFHVLLDRPEALASLRQRPLGHGKRWLVWLKLDC-GNGRAGVRPTDALELAQAIANDAPEEVTLVGVYAH-CSGADTIQAIARTTTNAVLSFVAALRQAGVPCPQASIGSTPSCSHPIPE-LTELHPGNYIF-TQLGSCQPQDVAIRVLTRVIGHYAHRGQLLVDCGWAALSLHGAGAGQGPQGCA-------------AIDGHPELRLVGLTQEHGLLEHAGFGRFPVGSVLALI...................................... 344
32 -20.7004v15_A mol:protein length:379 D-THREONINE ALDOLASE  ali model follow..  12  29.............................................LVLDLPAFEANLRAMQAWADREVALRPHAKA----HKCPEIALRQLALGARGICCQKVSEALPFVAAGIRDIHISNEVVGPAKLALLGAAKISVCVDNAENLAQLSAAMTRAGAEIDVLVEVDV-GQGRCGVSDDA-TVLALAQQARALPGLNFAGLQAY-YRTREERAAVCRQAARIAASYAQLLRESGIACDTITGGGTGSVEFDAASGYTELQAGSYAFMDSDYGANEWNGPLKFQNSLFVLSTV------------MSTPAPGRVILDAGLKS------AECGPPAVYGEPGLTYAAINDEHGVVRVEGAQAPALGAVLRLVPSHVDPTFNLHDGLVVVKDGVVQDVWEIAAR....... 375
33 -20.1003gwq_A mol:protein length:426 D-serine deaminase  ali model follow..  14  49.............................................AVLYADRVEHNLKWMQAFVAEGVKLAPHGKT----TMAPQLFRRQLETGAWGITLATAHQVRAAYHGGVSRVLMANQLVGRRNMMMVAEFEFFCLVDSVEGVEQLGEFFKSVNKQLQVLLELGV-PGGRTGVRDAAQRNAVLEAITRYPDTLKLAGVELYEGVLKEEHEVREFLQSAVAVTRELVEQERFARAPAVLSGAGSAWYDVVAEEFVVLRPGCYLTPVAKKMGEGLLPALQLWAYV--QSIPEPDRAIIGLGKRDSAFDAGMPEPARHYRPG------NEAPRDIAASEGWEIFGLMDQHAYLRIPAGADLKVGDMIAFD...................................... 395
34 -19.8003llx_A mol:protein length:376 Predicted amino acid aldolase or racemase  ali model follow..  11  17.............................................LLIDEAKLKSNINYLKQRVESGSHLRPHLKT----LRTLEAAGYLLDSKSAPATVSTLAEAEAYAKAGYT-DLLYAVGIAPAKLKRVAALNLHILLDNITQAQAVVDYAAEFGQDFSVFIEIDS-DDHRGGIKPSD----SKLLTIAKTLGEHFTGLMTH-CNTEQGLKNFAKQECDAVRIARNNLETAGIHCAITSVGST--------------------------------PTAHFGEDFSDISEVRAGVYTTFDLVMKNIGVCDFSHIAMSVVTTVIGHNKEKNWLLTD------SGWMALSR-GSVLDGLCVNSTSQEHGVIELSDAYQLEDFPVGHQLRIMPNHACATAA......... 353
35 -17.0001w8g_A mol:protein length:234 HYPOTHETICAL UPF0001 PROTEIN YGGS  ali model follow..  14  1.................................................MNDIAHNLAQVRDKIPEEITLLAVSKTKP-----ASAIAEAIDAGQRQFGENYVQEGVDKIRH--GLEWHFIGPLQSNKSRLVAEHDWCHTIDRLRIATRLNDQRPAELPPLNVLIQINISD-SKSGIQLAELDELAA--AVAELPRLRLRGLMA--IPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFG............................................................................................................................................. 227
36 -16.9003sy1_A mol:protein length:245 UPF0001 protein yggS  ali model follow..  13  2.................................................MNDIAHNLAQVRDKIPEEITLVAVSKTKP-----ASAIAEAIDAGQRQFSEHYVQEGVDKIRH--GLEWNFAGPLQSNKSRLVAEHDWCITIDRLRIATRLNDQRPAELPPLNVLIQINISD-SKSGIQLAELDELAA--AVAELPRLRLRGLSA--IPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLALGQSDDMEAAIAAGSTMVAIGTAIFG............................................................................................................................................. 228
37 -16.1005nlc_A mol:protein length:228 PipY  ali model follow..  15  1.................................................MAQIAERLASLRSQLPPSVQLIAVSKNHP-----AAAIREAYAAGQRHFGENRVQEAIAKQAELTDLPDLLLGKLQSNKARKAVEHDWIHSVDSWALAERLDRIAGELGRSPKLCLQVKLLP-NKAGWDPADLRAELP--QLSQLQQVQIRGLMV--IAPLGLTAAETQALFAQARTFAAELQQQAPQLRLTELS-SSDWPLAVAEGATWIRVGTQLFG............................................................................................................................................. 217
38 -15.8001b54_A mol:protein length:257 YEAST HYPOTHETICAL PROTEIN  ali model follow..  16  13..................................................TQLIAQYESVREVVASKILLLVVSKLKP-----ASDIQILYDHGVREFGENYVQELIE-KAKLLPDDI-FIGGLQTNKCKDLAKLYSVETIDSLKKAKKLNESRAKFQPPILCNVQINTSH-QKSGLNNEAIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRDFATLVEWKKKIDAKFGTSLKLSMGMSADFREAIRQGTAEVRIGTDIFGARPPKN....................................................................................................................................... 252
39 -15.1003r79_A mol:protein length:244 uncharacterized protein  ali model follow..  18  1...............................................MVVMEIEARLEDVRQRIAADVALVAVSKTFD-----AEAIQPVIDAGQRVFGENRVQEAQGLKEKTSDIELHLIGPLQSNKAADAVALDVVESIDREKIARALSEECARQGRSLRFYVQVNTGL-QKAGIDPRETVAFVA--FCRDELKLPVEGLMCIPPAEENPGPHFALLAKLAGQCGLEKLS----------MGMSGDFETAVEFGATSVRVGSAIFG............................................................................................................................................. 220
40 -14.8005x7m_A mol:protein length:453 Diaminopimelate decarboxylase  ali model follow..  16  34.................................LPDLAEEYGTPLFVVDEDDFRSRCRDMATAFGGPGNVHYASKAFL----TKTIARWVDEEGLA-LDIASINELGIALAAGFPASRITAHGNGVEFLRALVQNGVHVVLDSAQELELLDYVAAGEGKIQDVLIRVKATSHQKFGFSLASGSAFEAAKAANNAENLNLVGLHCHVGSQVFDAEGFKLAAERVLGLYSQIHSELGVALPELDLGGGYGIAYTAAEE--LVEPGRAIAG----------PSTVTIYEVGTTKDVHVDDD----------KTRRYIAVDGGMSDNIRPALYGSEYDARDPVSTRIVGSHC-DILINDEIYPSDITSGDFLALAATGA.................................. 403
41 -14.7002j66_A mol:protein length:428 BTRK  ali model follow..  14  8.................................ITALTKRFETPFYLYDGDFIEAHYRQLRSRTNPAIQFYLSLKANN----NIHLAKLFRQWGLG-VEVASAGELALARHAGFSAENIIFSGPKRSELEIAVQSGICIIAESVEELFYIEELAEKENKTARVAIRINKMG-RQFGMDESMLDAVMD--AVRSLQFTKFIGIHVYTGTQNLNTDSIIESMKYTVDLGRNIYERYGIVCECINLGGGFGVYFSHEKALDIGKITRTVSDYVQEARDTRFPQTTFIIESGRYLLAQAAVYVTEVLYRKASKGEVFVIVDGGMHHHAASTFRGRSM---ELEKVTIAGPLCEDCLGKDVH-VPALYPGD-LVCVLNSGAYGLSFSPVHFLGHPTPIEILKRNGS........ 399
42 -14.7001hkv_A mol:protein length:453 DIAMINOPIMELATE DECARBOXYLASE  ali model follow..  17  31.................................LTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGANVHYAAKAFL----CSEVARWISEEGLC-LDVCTGGELAVALHASFPPERITLHGNSVSELTAAVKAGVHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTSTAHQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIG-SQIFDVDGFELAAHRVIGLLRDVVGETAQIATVDLGGGLGISYLPSDD--VVEPGRAIAG----------PGTITLYEVGTVKDVDV----------SATAHRRYVSVDGGMSDNIRTALYGAQYDVRPPVPARLVGKHC-DIIVRDTWVPDDIRPGDLVAVAATGA.................................. 404
43 -14.5002o0t_A mol:protein length:467 Diaminopimelate decarboxylase  ali model follow..  17  33.................................LTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGANVHYAAKAFL----CSEVARWISEEGLC-LDVCTGGELAVALHASFPPERITLHGNSVSELTAAVKAGVHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTSTAHQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIG-SQIFDVDGFELAAHRVIGLLRDVVGETAQIATVDLGGGLGISYLPSDD--VVEPGRAIAG----------PGTITLYEVGTVKDVDV----------SATAHRRYVSVDGGMSDNIRTALYGAQYDVRPPVPARLVGKHC-DIIVRDTWVPDDIRPGDLVAVAATGA.................................. 406
44 -14.1003cpg_A mol:protein length:282 Uncharacterized protein  ali model follow..  18  19..............................................DARAREITDGVHRVLDRIAGSVRLLAATKTRD-----IGEIMAAIDAGVRMIGENRPQEVTALARRCAERGFSLIGQLQSNKIGKVLPVDTIESVDSIDLAEKISRRAVARGITVGVLLEVNESG-SKSGCDPAHAIRIAQ--KIGTLDGIELQGLMT--IGAHVHDETVIRRGFSHLRKTRDLILASGEPGTDRCRELSMGMTG--AEGSTIVRVGTAIFG............................................................................................................................................. 269
45 -13.9003btn_A mol:protein length:448 Antizyme inhibitor 1  ali model follow..  25.............................IDNYVYEHTLTGKNAFFVGDLGKIVKKHSQWQTVV-AQIKPFYTVKCNS----TPAVLEILAALGTG-FACSSKNEMALVQELGVSPENIIFTSPQVSQIKYAAKVGVNITCDNEIELKKIARNHPNAKVLLHIATEDNIG--MKFGTTLKNCR---HLLECAKELDVQIIGVKFHVS-SACKEYQVYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNISEPGSYYVS----------SAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDLNTIPE-FTSSLWGPSCLDQIVESCL-LPELNVGDWLIFDNMGADSFHEPSAF......................... 395
46 -13.8002oo0_A mol:protein length:471 Ornithine decarboxylase  ali model follow..  11  29.......................TAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKAL-PRVTPFYAVKCND----SKAIVKTLAATGTG-FDCASKTEIQLVQSLGVPPERIIYANPQVSQIKYAANNGVQMTFDSEVELMKVARAHPKAKLVLRIATDDSKA--VKFGATLRTSR---LLLERAKELNIDVVGVSFHVG-SGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINYFPSDSGVRIIAEPAFTLAVNIIAKKIVL-KEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVKPKYYSSSIWGPTCLDRIVERCD-LPEMHVGDWMLFENMGAYTVAAASTF......................... 407
47 -13.7007odc_A mol:protein length:424 PROTEIN (ORNITHINE DECARBOXYLASE)  ali model follow..  11  19.......................TAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKAL-PRVTPFYAVKCND----SRAIVSTLAAIGTG-FDCASKTEIQLVQGLGVPAERVIYANPQVSQIKYAASNGVQMTFDSEIELMKVARAHPKAKLVLRIATDDSKA--VKFGATLKTSR---LLLERAKELNIDVIGVSFHVG-SGCTDPDTFVQAVSDARCVFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINYFPSDSGVRIIAEPAFTLAVNIIAKKTVW-KEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVKAKYYSSSIWGPTCLDRIVERCN-LPEMHVGDWMLFENMGAYTVAAASTF......................... 397
48 -13.7004zgz_A mol:protein length:438 Antizyme inhibitor 1  ali model follow..  26.............................IDNYVYEHTLTGKNAFFVGDLGKIVKKHSQWQNVV-AQIKPFYTVKCNS----APAVLEILAALGTG-FACSSKNEMALVQELGVPPENIIYISPQVSQIKYAAKVGVNITCDNEIELKKIARNHPNAKVLLHIATEDNIG--MKFGTTLKNCR---HLLECAKELDVQIIGVKFHVS-SACKESQVYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNISEPGSYYVS----------SAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE-FTSSLWGPSCLDQIVESCL-LPELNVGDWLIFDNMGADSFHEPSAF......................... 396
49 -13.6001tuf_A mol:protein length:434 Diaminopimelate decarboxylase  ali model follow..  11  21.................................AIELAEKFGTPLYVMSEEQIKINYNRYIEAFKREFIVAYAYKANA----NLAITRLLAKLGCG-ADVVSGGELYIAKLSNVPSKKIVFNGNTKEEIIMGIEANIAFNVDSISELILINETAKELGETANVAFRINSTGLNKFGLDVESGIAMKAIKMALEMEYVNVVGVHCHIG-SQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIPTQKDLADAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMMRPAMYEAYHHIIEKEVVSIAGGLC-DVFGRDRE-LDKVEVGDVLAIFDVGA.................................. 386
50 -13.2003mt1_A mol:protein length:365 Putative carboxynorspermidine decarboxylase protein  ali model follow..  11  9...............................................IDKAKLTRNMERIAHVREKGAKALLALKCFA----TWSVFDLMRDYMDG-TTSSSLFEVRLGRERFGKETHAYSVAYGDNEIDEVVSHADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVMDRINGFMIHNNCENKDFGLFD----RMLGEIEERFGALIARVDWVSLGGGIH-FTGDDYPVDAFSARLRAFSDRYGVQIYLEPGEASITKSTTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIYRETAKVLPNEGS-----HSYMICGKSCLA-VFGEFRFAEELKVGDRISF....................................... 318
51 -13.1002plj_A mol:protein length:419 lysine/ornithine decarboxylase  ali model follow..  12  38...............................HLIEASVEQFGAPLLLLDCDVIRQQYRALKNAL-PNVTLHYALKPLP----HPVVVRTLLAEGAS-FDLATTGEVELVASEGVPADLTIHTHPRDADIRDALAYGCNVVVDNLNELEKFKAYRDDVELLVRLSFRNSEA--KKFGCSPEQAL---VIIETAKEWNIRIKGLSFHVG-SQTTNPNKYVEAIHTCRHVMEQVVERGL------------------PALSTLDIG----GFPVNYTQQVMPIDQFCAPINELSLLPETVHV--GRFICAPAVTSVASV--GIYGSFSGLMFDDARYPLT-IPSVLSGPTCVDVIAENIL-LPKLNNGDLVIGMGAYTSATAT............................. 388
52 -13.0004aib_A mol:protein length:395 ORNITHINE DECARBOXYLASE  ali model follow..  10  8........................VKEFALNLISQFEPENQPLGFWIFDTEGVEKAVERWKKNM-PTVRPCFAVKCNP----EPHLVKLLGELGCG-FDCASLNEIKEVLDLGFNPEDITYSQTPYNQLIEASHLGINHIVDSIDEVQKIAKYAPKMGIMIRIMENDTSAGHEKFGLHDDEVE---IVLKEIKDKGLNLDGVHFHVG-SDSHNSEVFTKALTKARNTVTLAEQFGMKPYLIDIGGGFSQVAPFEEFAATIEKTIKELEFPERTRFIAEPAFHLVSSLHGKRVRIQNGKKQIEYTSGDGLHGSFGCCIWFEKQKSCECITQKVNENTKMYESIIYGPSCSDKVATQEL-PEMEPGKDWLLFPNMGAYTISMATNF......................... 371
53 -13.0001f3t_A mol:protein length:425 ORNITHINE DECARBOXYLASE  ali model follow..  10  25.............................LCKKISMNTCDEGDPFFVADLGDIVRKHETWKKCL-PRVTPFYAVKCND----DWRVLGTLAALGTG-FDCASNTEIQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVA-KTHPKAKMVLRISTDDSVKFGAKVEDCR---FILEQAKKLNIDVTGVSFHVG-SGSTDASTFAQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINHFPPDLKLTIVAEPAFTLAVNVIAKKVTPGVQTDVGAHA-ESNAQSFMYYVNDGVYGSFNCILYDHAVVRPKLYPSSVWGPTCLDQIVERYY-LPEMQVGEWLLFEDMGAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVR.... 418
54 -13.0005gjo_A mol:protein length:394 Lysine/ornithine decarboxylase  ali model follow..  11  12.................................VKTLAKRIPTPFLVASLDKVEENYQFMRRHL-PRAGVFYAMKANP----TPEILSLLAGLGSH-FDVASAGEMEILHELGVDGSQMIYANPDARGLKAAADYNVRRTFDDPSEIDKMAKAVPGADVLVRIAVRNNKA--TKFGAPVEEAL---DLLKAAQDAGLHAMGICFHVG-SQSLSTAAYEEALLVARRLFDEAEEMGMHLTDLDIGGGFPVPDCKGLNVDLAAMMEAI-RLFPDTAVWTEPAVNLVTSVIGTKT---------------RGEQPWYILDEGIYGCFSGIMYDHWCYPLNKKPSTFGGPSCIDVLYRDFM-APELKIGDKVLVTEMGSYTSVSATRF......................... 361
55 -12.8004xg1_A mol:protein length:427 Diaminopimelate decarboxylase  ali model follow..  12  19.................................VEQVVKKTGTPAYIYSRATIERHWQAFDSAAGKPHLICYAVKANS----NLAVLNLMARMGSG-FDIVSVGELMRVIQAGGDPKKIVFSGVTEIEISAALQANICFNVESISELYRINSVAKALNVKAPISIRINSTGLNKFGIEIEQALDVYK--IASDLEFLEIKGVDCHIG-SQLTEIAPFIEALDKLLILIDLLAEKGITISHLDLGGGLGVPYDDETPPEIFEPGRAIMA----------NAGVLVTKVEFLKL---------------NDYKNFAIVDAAMNDLIRPALYSAWQNIIPVRSYDIVGPICETGDFLGKERQLALAEGDYLVIRSTGA.................................. 375
56 -12.7002qgh_A mol:protein length:425 Diaminopimelate decarboxylase  ali model follow..  14  18.................................YEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGKSLICYALKANS----NLSILSLLAHLESG-ADCVSIGEIQRALKAGIKPYRIVFSGVSAFEIEQALKLNIFLNVESFMELKTIETIAQSLGIKARISIRINSTGLNKFGVGEKEALEMFL--WAKKSAFLEPVSVHFHIG-SQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQGLDLTIEPGRSIVA--------ESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIREISPCDVVGPVC-DTFLKDAH-LPELEPGDKIAIEKVGA.................................. 371
57 -12.7003vab_A mol:protein length:443 Diaminopimelate decarboxylase 1  ali model follow..  14  34.................................LPEIAKAVGTPFYVYSRATIERHFRVFHDAFADDTLVTYALKANS----NQAVLTALAKLGAG-ADTVSQGEIRRALAAGIPANRIVFSGVTPREMDFALEAGICFNVESEPELEILSARAVAAGKVAPVSLRINSTGKNKFGIPRDKARAAYA--RAASLPGLNVVGIDMHIG-SQIIDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTPNT--VFEPGRLIVG----------NAGLLVTEVIFVKEGDAKNFV------IVDAAMNDLIRPTLYDAFHDIRPVIMPNDNAPRIRADFVGPVC-DYLGLDRE-VAKPAPGDLIAICTTGA.................................. 390
58 -12.4003n2b_A mol:protein length:441 Diaminopimelate decarboxylase  ali model follow..  14  37.................................LADLANQYGTPLYVYSRATLERHWHAFDKSVGDPHLICYAVKANS----NLGVLNTLARLGSG-FDIVSVGELERVLAAGGDPSKVVFSGVTEAEMKRALQLKICFNVESEPELQRLNKVAGELGVKAPISLRINSTGLNKFGITFDRAAQVYR--LAHSLPNLDVHGIDCHIG-SQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLERHRDLELIFEPGRAIAA--------NAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIEAQTYDLVGPVCETSDFLGKDRDLVLQEGDLLAVRSSGA.................................. 389
59 -12.4001knw_A mol:protein length:425 Diaminopimelate decarboxylase  ali model follow..  15  17.................................LLRLPAEFGCPVWVYDAQIIRRQIAALKQFD----VVRFAQKACS----NIHILRLMREQGVK-VDSVSLGEIERALAAGYNPQVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVSQKTNTGGESKHGIWYTDLP---AALDVIQRHHLQLVGIHMHIGSG------DYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISPTVETVVAGPLC-DVFTQQEGALPEVKAGDYLVLHDTGA.................................. 377
60 -12.1002nv9_A mol:protein length:372 A207R protein, arginine decarboxylase  ali model follow..  10  5.............................VNNILKAHPHQTKSFYV-SSPKIVEDLIDQWTILF-PRVTPHYAVKCNN----DEVLLKTMCDKNVN-FDCASSSEIKKVIQIGVSPSRIIFAHTTIDDLIFAKDQGVDITFDSSFELDKIHTYHPNCKMILRIRCDDPNA--NKFGANEDEIR---HLLEYAKQLDIEVIGISFHVG-SGSRNPEAYYRAIKSSKEAFNEAISVGHKPYILDIGGGLHADIDEGELSDYINDAIKDFFPEDTVTIVAEPYSVLATQVIGKRV---------------RDGLYEYFFNESTYGGFSNVIFEKSVPTPQ-VPSVLYGCTCVDVINHNVA-LPELHIGDWVYFPSWGAYTNVLTTSF......................... 361
61 -11.9002p3e_A mol:protein length:420 Diaminopimelate decarboxylase  ali model follow..  15  25.................................LKELAQTFGTPLYVYSSNFIKERFEAYRKAF-PDALICYAVKANF----NPHLVKLLGELGAG-ADIVSGGELYLAKKAGIPPERIVYAGVTEKELTDAVDSEIMFNVESRQELDVLNEIAGKLGKKARIAIRVNATGMSKFGVDIREAQKEYE--YASKLENLEIVGIHCHIG-SQILDISPYREAVEKVVSLYESLTQKGFDIKYLDIGGGLGIKYKPEDK--ILEPGRSIMG----------NAGILITQVQFLKD---------------KGSKHFIIVDAGMNDLIRPSIYNAYHHIIKKVVADIVGPIC-DFLALDRE-IEEVQRGEYLAVLSAGA.................................. 376
62 -11.8003n29_A mol:protein length:418 Carboxynorspermidine decarboxylase  ali model follow..  29.................................FTMFYEKIQTPAYILEEDKLRKNCELLASVGESGAKVLLALKGFA----FSGAMKIVGEYLKG-CTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSKTQKNSLGLRCNVEFSLAP-SRLGIRAKD---------FENVDLNAIEGLHFHALCEESADALE-----AVLKVFEEKFGKWIGQMKWVNFGGGHH-ITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGW--------QTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARIYLLTGNTCLA-VMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTF......................... 380
63 -11.4002yxx_A mol:protein length:386 Diaminopimelate decarboxylase  ali model follow..  10  2..............................DILRKVAEIHGTPTYV-YFEETLRKRSRLVKEVFEGNLLPTFAVKANN----NPVLLKILREEGFG-MDVVTKGELLAAKLAGVPSHTVVWNGNGKSRDQMEHFLREDVRIVNVDSFEEMEIWRELNPEGVEYFIRVNSTGLHKFGIPLEDLDSF-----MERFRSMNIRGLHVHIGS--------QITRVEPFVEAFSKVVRASERYGFEEINIGGGWINYSGEELDLSSYREKVVPLKRFKRVIVEIGRYIVA--------PSGYLLLRVVLVKRRHNKAFVVVDGGMNVLIRPALYSAYHRIFKEMRADVVGPLC-DVIAYDRE-LPEVEPGDIIAVENAGA.................................. 342

FFAS is supported by the NIH grant R01-GM087218-01
1 2 5 9 7 0   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;