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Query: 4e51_A mol:protein length:467 Histidine--tRNA ligase, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAMGTLEAQTQGPGSMTEQKRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTPLFTRGIGEVTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIVMMCQRLWEDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHADKLDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPKLIDFLGDVSRAHFEGLQRLLKANNVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEEHLVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRGTGDDGEKSVQQSVPVESLTEFLINAMVATAEDGDDLast
1 -132.0004e51_A mol:protein length:467 Histidine--tRNA ligase  ali model  100  1MAMGTLEAQTQGPGSMTEQKRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTPLFTRGIGEVTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIVMMCQRLWEDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHADKLDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPKLIDFLGDVSRAHFEGLQRLLKANNVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEEHLVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRGTGDDGEKSVQQSVPVESLTEFLINAMVATAEDGDD 461
2 -116.0002el9_A mol:protein length:431 Histidyl-tRNA synthetase  ali model follow..  52  3................GYQDPMAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDR-NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISHVTLELNSIGSLEARANYRDALVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQALLNDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFKDPVVDIYLVASGADTQSAAMALAERLRDE--LPGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDL-------RSGEQTAVAQDSVAAHLRTLLG........ 431
3 -116.0005e3i_A mol:protein length:438 Histidine--tRNA ligase  ali model follow..  48  2.....................AMSSIVAIKGFNDVLPTQTAAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMYTFFDKGNPESLTLRPEGTAGCVRALVEHNLLRGATPRVWYMGPMFRYEKPQKGRYRQFHQFGVETFGVATPDIDAELIMLTARLWKRMGVDHVQLELNTLGETDERTEYRNALVAFLNEHKDALDEDSQRRLTTNPLRILDSKIESTQKILENAPKLHDFLKEDSLSHFQQLQDYLTAAGIKFVINQKLVRGLDYYNKTVFEWTTTALGSQGTVCAGGRYDGLVGQLKGKSVPAVGFAMGMERLLLLLEQVEQAEI-VRDCEAFLVAEPAYQSKALVLAEQLRDQLEAANSNIRIKTSQGSMKSQMKKADQAGAVYAIILGEREWEAQQLAVKEL-------ATAEQSQVALAELVPFLIEKFTK....... 432
4 -113.0001qe0_A mol:protein length:420 Histidine--tRNA ligase  ali model follow..  40  2.........................IKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDK-GDRSITLRPEGTAAVVRSYIEHKMNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLKLVINSVGDMASRKEYNEALVKHFEPVIHEFCSDCQSRLHTDPMRILDCKVDRDKEAIKTAPRITDFLNEESKAYYEQVKAYLDDLGIPYTEDPNLVRGLDYYTHTAFELMMDNPNAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLALEEEGIELDEENLDLFIVTMGDQADRYAVKLLNHLRHNGIKADK----DYLQRKIKGQMKQADRLGAKFTIVIGDQELENNKIDVKNM-------TTGESETIELDALVEYFKK........... 420
5 -113.0004rdx_A mol:protein length:423 Histidine--tRNA ligase  ali model follow..  39  1.....................GPMTARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDR-GGRSLTLRPEGTAAMVRAYLEHGMVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRRLKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDSKERLELNPMRILDSKSERDQALLKGVRPMLDFLGEEARAHLKEVERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEAEGFGLPEKGPDLYLIPLTEEAVAEAFYLAEALRPR-----LRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRL-------ATGEQVRLSREEVPGYLLQALG........ 423
6 -98.7003net_A mol:protein length:465 Histidyl-tRNA synthetase  ali model follow..  22  3................AMAKNDKINFSTPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKGNQGDNIIQAEKDKSGDT-GSEARALKFDQTVPLAAYIARHLNDLTFPFARYQMDVVFRGERAKDGRFRQFRQCDIDVVGRESLLYDAQMPAIITEIFEAVNIGDFVIRINNLNISETQIKSCISIIDNLEKIGEAKVKLELEKEGINPEQTQKIIDGSVDDVLDKLKHLSQTLPELGVSELETVITGVRNLGVPFCIDLAIARGLNYYTGTVYETTLIGHEALGSICSGGRYEELVGTFIGEKMPGVGISIGLTRLISRLLKAGILNTPTPAQVVVVNMQDELMPTYLKVSQQLRQAGLNVITNFE----KRQLGKQFQAADKQGIRFCVIIGADEAAAQKSSLKDL-------QSGEQVEVALADLAEEIKRRLT........ 465
7 -98.5003hrk_A mol:protein length:456 Histidyl-tRNA synthetase  ali model follow..  20  3.....MGTLEAQTQGPGSMQKNMVETEPVQGCRDFPPEAMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKAGEE---ITEQMFNFITK-GGHRVALRPEMTPSLARLLLGKGRSLLLPAKWYSIPQCWRYEAITRGRRREHYQWNMDIVGVKSVSAEVELVCAACWAMRSLGLSDVGIKVNSRKVLQTVVEQAGVTSDKFAPVCVIVDKEVEAQLAVLGLEPTVVDAITTTLSLKSIDEIAQRVGEEAVKELRQFFEQVEAYGYGVLFDASVVRGLAYYTGIVFEGFDRE-GKFRALCGGGRYDNLLTTYGSPPIPCAGFGFGDCVIVELLQEKRLLPDPHVVDDVVIPFDESMRPHALAVLRRLRDAGRSADIILD----KKKVVQAFNYADRVGAVRAVLVAPEEWERGEVQVKML-------REGTGKEEGGAERGFAVPL........... 446
8 -97.1004g85_A mol:protein length:517 Histidine-tRNA ligase, cytoplasmic  ali model follow..  20  42IEEEVAKLLKLKAQLGPDESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDS----KLIYDLKDQ-GGELLSLRYDLTVPFARYLAMNKL---TNIKRYHIAKVYRRDNPARGRYREFYQCDFDIAGNFDPMPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDKGEKGLAPEVADRIGDGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGIDISFDLSLARGLDYYTGVIYEAVLLQTPAQGSVAAGGRYDGLVGMFDPRKVPCVGLSIGVERIFSIVEQRLEALETTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKN---PKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSV-------TSREEVDVRREDLVEEIKRRTGQP...... 516
9 -97.0001wu7_A mol:protein length:434 Histidyl-tRNA synthetase  ali model follow..  26  2.....................YRLQIEKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEE---LLQQTYSFVDK-GGREVTLIPEATPSTVRMVTSRK-DLQRPLRWYSFPKVWRYEEPQAGRYREHYQFNADIFGSDSPEADAEVIALASSILDRLGLQDYEIRINSRKIMSDPFSVFSIIDRYHKISREEFVDQLRSGIGEDGVSMIADLCSGTRGIDEMAR--ITGKSSEEIARMAAVEDLLASYGVKVRYDFSIVRGLSYYTGIVFEAYDRS-GQFRAILGGGRYDNLASLMSGESVPAVGFGMGDAVISLLLKRENVQIPREKKSVYICRVGKINSSIMNEYSRKLRERGMNVTV----EIMERGLSAQLKYASAIGADFAVIFGERDLERGVVTIRNM-------YTGSQENVGLDSVVEHLISQATLE...... 428
10 -95.2004g84_A mol:protein length:464 Histidine--tRNA ligase, cytoplasmic  ali model follow..  20  2.............PGSEFELRRQFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDS----KLIYDLKDQ-GGELLSLRYDLTVPFARYLAMNKL---TNIKRYHIAKVYRRDNPTRGRYREFYQCDFDIAGNFDPMPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDKGEKGLAPEVADRIGDGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGIDISFDLSLARGLDYYTGVIYEAVLLQTPAQGSVAAGGRYDGLVGMFDPRKVPCVGLSIGVERIFSIVEQRLEALETTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKN---PKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSV-------TSREEVDVRREDLVEEIKRRTGQP...... 463
11 -94.4003hri_A mol:protein length:456 Histidyl-tRNA synthetase  ali model follow..  22  2....AMGTLEAQTQGPGSMQMNMVETEPVQGCRDFPPETMRLRKYLFDVFHSTARKFGFEEYDSPVLESEELYIRKAGEE---ITEQMFNFITK-GGHRVALRPEMTPSLARQLLAKGRSLLLPAKWYSIPQCWRYEAITRGRRREHYQWNMDIIGVKSVSSEVELVCAACTAMQSLGLSDVGVKINSAGVSADKFAPVCVIVDKMEKREEVVAQLAAIGLESNVVDAITSTLS-----LKTIDEIAQRIGEEAVRELRDFITQIEAYGFGVIFDASVVRGLAYYTGIVFEGFDRD-GNFRALCGGGRYDNLLTTYGSPTVPCVGFGFGDCVIVELLNEKKLLPEHHVVDDLVIPFDETMRPHALSILRRLRDAGRSADIVFD----KKKVVQAFNYADRIGALRAVLVAPDEWARGEVRVKMLR-------EGAGREEGANERGIVLPV........... 446
12 -82.7003od1_A mol:protein length:400 ATP phosphoribosyltransferase regulatory subunit  ali model follow..  20  1................SNAMSKPFMFEKPFGMRDTLPEWYKTKKNICDQMTEEINLWGYDMIETPTLEYYETV----GVVSAILDQQLFKLLDQ-QGNTLVLRPDMTAPIARLVASSLKDRAYPLRLAYQSNVYRAQQNEGGKPAEFEQLGVELIGDGTASADGEVIALMIAALKRAGLSEFKVAIGHVGYVNALLMDVVGNEQRADRLRRFLYELNLSTIDKSRLMNLLSLRGGRAAIEEARGLIQTEKGKTALAEMTKLYEVLESYGASVKFDLTLVLHMSYYTGVVFEGYGNRLGV--PLCSGGRYDELLSKFHRP-AQATGFGVRIDLLVEALNGEII---SNGHEQTCILFSNERRFEAIELARKKRANGEAVVL----QDLAGVTDVDAMSSNYQDVIYCIGTAGRGGEDA............................................ 400
13 -79.7001z7m_A mol:protein length:344 ATP phosphoribosyltransferase regulatory subunit  ali model follow..  21  2...........RGSGSIEGRMEKINYLLPEESAEMTLNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQEKMFQFIKHEG-QSITLRYDFTLPLVRLYSQIK--DSTSARYSYFGKIFRKEKRHKGRSTENYQIGIELFGESADKSELEILSLALQVIEQLGLNKTVFEIGSAKFFQRLCQLADGSTELLTELLLKLNAFIEKNNFSKELRGLLKEIFITNELSRLENLVTNTKDDVLISSFDQLKEFSEKLSMPIIIDLGMVPKMDYYTDLMFKAYSS--AANQPILSGGRYDQLLSNFQE-EAFAIGFCCHMDTILKALERQELEEDND.................................................................................................................. 338
14 -75.3006FTT Entity 1(prereleased)  ali follow..  18  3...........................LPDGVADVLFEDAHKQEVLRHQLTQQLITHGYQLVSPPMIEFTESLLSGASED---LKRQTFKIIDQLTGRLMGIRADITPQILRIDAHHG--GDGIARYCYAGDVIHTLPSGLFGSRTPLQLGAEIFGCESIAADIELIDVLFSMINSLDMSALHVDLGHVTIFKRLAELAALSASDTEQLMQLYANKNLPELKQSDFYTLARFGHDIANLLGRLSENADTKIVTAIDELQRLKAHLQVQWCAVSIDVTELSGYHYHTGIVFNGYIN--SETQPLVRGGRFDGMKSNQLNQPRQATGFSMDVSRLLAHTQLDAPFIVLI-DYDAFNNLDSAQRQLLLQQVASLRQQGYRVTMPLTAEDMPVGLTHRLSLADNQWRLHAV...................................................... 388
15 -75.3005m8h_A mol:protein length:388 ATP phosphoribosyltransferase regulatory subunit  ali model follow..  18  3...........................LPDGVADVLFEDAHKQEVLRHQLTQQLITHGYQLVSPPMIEFTESLLSGASED---LKRQTFKIIDQLTGRLMGIRADITPQILRIDAHHG--GDGIARYCYAGDVIHTLPSGLFGSRTPLQLGAEIFGCESIAADIELIDVLFSMINSLDMSALHVDLGHVTIFKRLAELAALSASDTEQLMQLYANKNLPELKQSDFYTLARFGHDIANLLGRLSENADTKIVTAIDELQRLKAHLQVQWCAVSIDVTELSGYHYHTGIVFNGYIN--SETQPLVRGGRFDGMKSNQLNQPRQATGFSMDVSRLLAHTQLDAPFIVLI-DYDAFNNLDSAQRQLLLQQVASLRQQGYRVTMPLTAEDMPVGLTHRLSLADNQWRLHAV...................................................... 388
16 -71.9003rac_A mol:protein length:373 Histidine-tRNA ligase  ali model follow..  19  1...SNAMNGTRSAWGARAWEAVRGFADRPPGMQDGYPDFAKRRRAVETRLLSFVEDAGYEPVTSGLFEYVDTLLRARSPESS---RDWIRLFDG-GGDAVALRPEMTPSIARMAAPRVAAGRTPIRWCYCERVYRRTSWASGKAAESTQVGIERIGEEASVVDMDVLRLLHEASAAAGVRHHRIVVSHARLVPRLLDALGISASLSRAFLACLTSGNYVQFRENLLTWSPAERDAAKRSREASDRELEALLRDAWRYLCRLAEALHDSGLAVTFDLALHRELDYYTGLVFEMFAPGVG--APIAQGGRYDELLAQFGA-GAPAVGFAFEVERVMAVLEAQEEGEGEC.................................................................................................................. 373
17 -60.3001usy_A mol:protein length:275 ATP PHOSPHORIBOSYLTRANSFERASE REGULATORY SUBUNIT  ali model follow..  16  2.................................DFLDFE------KVFSFYSKATKKGFSPFFVPALEKAEEP-------------AGNFFLDR-KGNLFSIREDFTKTVLNHRKRYS--PDSQIKVWYADFVYRYSGSD---LVAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGPVIVEIGHTGVYEDHEKVLNLIDTKNLAEIEFLSHMKKIDLSRVEKIIEDSIYRRSPEHLKTMDLPLSVR-----EDLLSASSFLQEKTVSVEIDLTLARTIEEYCGLIFTIYDTSSSR--LVAAGGEYTVNGE-------KGVGGSIFLEGK................................................................................................................................ 273
18 -51.6004cs2_A mol:protein length:274 PYRROLYSINE--TRNA LIGASE  ali model follow..  12  15.LLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFR-----VDKNFCLRPMLAPNLANYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLESI--ITDFLNHLGI-DFKIVGDSCMVFGDTLDVMHGDLELSSAVVGPIPLDREWGIDKPWIGAGFGLERLLKKNIKRAARSESYYNGISTN............................................................................................................................................................................................................. 267
19 -47.1003qtc_A mol:protein length:290 Pyrrolysyl-tRNA synthetase  ali model follow..  12  29.LLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFR-----VDKNFCLRPMLTPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLVFWQMGSGCTRENLESI--ITDFLNHLGI-DFKIVGDSCMVFGDTLDVMHGDLELSSALVGPIPLDREWGI-DKPWIGAGFGLERLLKVKHDFKNI---------KRAARSESYYNGISTNL............................................................................................................................................................................................. 282
20 -46.6002lw7_A mol:protein length:170 Histidine--tRNA ligase, cytoplasmic  ali model follow..  14  3......................................................................................................................................................................................................................................................................................................RAALEELVKLQGERVRGLKQQKASAELIELGPDESKQKFVLKTPKALEEKRTTETQVLVASAQKKLLEERLKLVSELQDAGIKAELLYK---KNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSV-------TSREEVDVRREDLVEEIKRRTGQPLS.... 168
21 -43.3004bw9_A mol:protein length:291 PYRROLYSINE--TRNA LIGASE  ali model follow..  11  31VLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERNYLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFR-----VDKNFCLRPMLAPNLGNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLESI--ITDFLNHLGI-DFKIVGDSCMVFGDTLDVMHGDLELSSAVVGPRPLDREWGIDKPWIGA-----------FGLERLLKVKHDFKNIKRAARSESYYNGISTNL............................................................................................................................................................................................. 285
22 -40.3005k1p_A mol:protein length:274 Pyrrolysine--tRNA ligase  ali model follow..  12  14VLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRV-----DKNFCLRPMLAPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLAFAQMGSGCTRENLESI--ITDFLNHLGIDF-KIVGDSCMVYGDTLDVMHGDLELSSAVVGPIPLDREWGIDKPWI........................................................................................................................................................................................................................................... 232
23 -37.5004q6g_A mol:protein length:267 Pyrrolysine--tRNA ligase  ali model follow..  14  17....PKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRV-----DKNFCLRPMVAPNIFNYARKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFFQMGSGCTRENLE--SIITDFLNHLGIDFKIVG----------------------------------------------------------------------------------------------------SCSVYGDTLDVMHGDLELSSAVVGPIPLDREWGIDKPWIGAGFGLERLLKVKHDFKNIKRAARSESYY............................................................................................................ 260
24 -34.9002e3c_A mol:protein length:291 Pyrrolysyl-tRNA synthetase  ali model follow..  13  31VLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEEREYLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRV-----DKNFCLRPMLAPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLE--SIITDFLNHLGIDFKIVGDSC................................................................................................................................................................................................................................................................................. 212
25 -32.1004tqd_A mol:protein length:291 Pyrrolysine--tRNA ligase  ali model follow..  13  31VLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEEREYLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRV-----DKNFCLRPMLAPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLSFIQMGSGCTRENLE--SIITDFLNHLGIDFKIVGDSC---------------------------------------------------------------------------------------------------MVYGDTLDVMHGDLELSSAVVGPIPLDREWGIDKPWIGAGFGLERLLKVKHDFKNIKRAARSESYY............................................................................................................ 278
26 -28.5002zni_A mol:protein length:308 Pyrrolysyl-tRNA synthetase  ali model follow..  16  41ASGEQLEMGFSDALSRDRAFQGIEHQLMSQGKRHL-VKHRPALLELEEKLAKALHQQGFVQVVTPTIITKSALAKMTIGED----HPLFSQVFWL-DGKKCLRPMLAPNLYTLWRELERLWDKPIRIFEIGTCYRKESQGAQHLNEFTMLNLTELGTPLEERHQRLEDMARWVLEAAGIREFELVTESSVVYGDTVDVMKG----------------------------------------------------------------------------------------LELASGAMGPHFLDEKWEIFD-----------PWVGLGFGLERLLMIREGTQHVQSMARSLSYL............................................................................................................ 294
27 -25.8002i4l_A mol:protein length:458 Proline-tRNA ligase  ali model follow..  13  15MRLSRFFLPILKENPKEAEIVSHRLMQEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLADLWRES--GRYDAYGPEMLRIADR-HKRELLYGPTNEEMITEIFRAYKSYKSLPLNLYHIQWKFRDERPRFGRGREFLMKDAYSFDVDEAGARKKMFVAYLRTFARMGLKAIPMRAETDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYDGDLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIE-VGQIFYFGTK-------YSDSMKANVTGPDGTDAPIHGG-------------------YGVGVSRLLGAIIEACHDDNGAPFRVTILNLKAATDAACDQLYRELSAKGVDVLY----DDTDQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELKR-------RSDGARENLALADVVARLT............ 452
28 -22.4005ucm_A mol:protein length:579 Proline--tRNA ligase  ali model follow..  14  1MAMRTSQYLLSTLKETPADAVVISHQLLLRGLYTWLPMGLRVLRKVETIVREEMNAAGALEVLMPAVQPAELWQES--GRWEQYGPELLRLKDRHE-REFCVGPEVITDLARNELNS--YKQLPINFYQIQTKFRDERPRFGRGREFIMKDAYSFHLSQDSLQQGMYQAYSKIFSRLGLDFRPVQADN-GSIGGSGSHEFHVLANSGEDDIVFSDSSDYAANIEKAEAVPRESARGSATEDNTKTIAALVDGFQLPIEKTIKTLVVHGAEEGTLVALIVRG-DLPLPEVADLRNVVEGDPSPDGKGTKYSEVLSEQGKPVNLIMGYGIGVSRVVAAAIEQNHDERGAPFQIALVPLKESVKQATDKLYAELTAAGF--EVLLDDRDKKTSPGVKFADMELIGIPHRIVISDRGLSEGVLEYKGRR-------DSESQNLPIGELMSFITEKLSR....... 573
29 -21.7002j3l_A mol:protein length:572 PROLYL-TRNA SYNTHETASE  ali model follow..  16  1MKQSKMLIPTLREVPNDAEVLSHQILQVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKES--GRYETYGPNLYRLKDR-NDRDYILGPETFTELIRDEINS--YKRLPLNLYQIQTKYRDERSRSGRGREFIMKDGYSFHADEASLDQDYEKAYSRIFERCGLEFRAIIGDG--IATPEVGTIAEVANFFEVEPQRIIKSVLFIADEEPVMVLVRGDHDVNDVKLKNFLGADFLDEATEEDARRVLGAGFGSIGPVNVSEDVKIYADLAVQDLANAIVGANEDGYHLTNGTRYSDVLDENGREKSVIMGYGIGVSRLLSAIVEQNADERGAPFDLHVVQMNEYQTKLSQEVEAMMTEAGYEVLV----DDRNERAGVKFADADLIGCPIRITVG-KKAVDGVVEVKIKR-------TGEMLEVRKEELESTLSILMNTTSEVE.. 572
30 -21.7004k86_A mol:protein length:535 Proline--tRNA ligase  ali model follow..  10  37.....KEENLADWYSQVITKSEMIEYHDISGCYILRPWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQSALEKE--KTHVADFAPEVAWVTRSGAEPIAIRPTSETVMYPAYAKWQSHRDLPIKLNQWCNVVRWEKHPQPRTREFLWQEGHSAFATMEEAAEEILDLYAQVYEELLAIPVVKGRKTEKEKFAGGDYTTTIEAFISASGRAIQGGTSHHLGQNFSKMFEIV----------------FEDPKIPGEKQFAYQN-------------------------------SWGLTTRTIGV-----MTMVHGDNM--GLVLPPRVACVQVVIIPCGITNALSEED------KEALIAKCNDYRRRLLSVNIRVRADLRDN---YSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-------RDTGEKLTVAENEAETKLQAILEDIQVT... 428
31 -21.1004hvc_A mol:protein length:519 Bifunctional glutamate/proline--tRNA ligase  ali model follow..  12  20....KKEENLADWYSQVITKSEMIEYHDISGCYILRPWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQSALEKEKTHVAD---APEVAWVTRSGAEPIAIRPTSETVMYPAYAKWQSHRDLPIKLNQWCNVVRWEKHPQPRTREFLWQEGHSAFATMEEAAEEILDLYAQVYEELLAIPVVKGRKTEKEKFAGGDYTTTIEAFISASGRAIQGGTSHHLGQNFSKMFEIV----------------FEDPKIPGEKQFAYQN----------------------------------------------GLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDKEALIAKCNDYRRRLLSVNIRVRA---DLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-------RDTGEKLTVAENEAETKLQAILEDIQVT... 412
32 -21.0001h4q_A mol:protein length:477 PROLYL-TRNA SYNTHETASE  ali model follow..  16  1..MAKEKGLTPQSQDFSEQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEH--EGFSPELAVVTHAGGEEPLAVRPTSETVIGYMWSKWRSWRDLPQLLNQWGNVVRWEMRTRPRTSEFLWQEGHTAHATREEAEEEMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKA--------------------------------------------------------------LQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGLSWRFIGA--------------IMTHGDDRGLVPRLAPIQVVIVPIYERVLEAAQGLRQALLAQGLRVHLD---DRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLAS--------RLGGKETLPLAALPEALPGKLDAFHEE... 391
33 -20.9004hwo_A mol:protein length:411 Threonine--tRNA ligase  ali model follow..  15  1........MARDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKT--GHWDNYKDAMFTTSSE--NREYCIKPMNCPGHVQIFNQGKSYRDLPLRMAEFGSCHRNEPSGS-RVRGFTQDDAHIFCTEEQIRDNGCIRLVYDMYSTFGFEKIVVKLSTR----------------------------------------PEKRIGSDEMWDRAE--------------ADLAVALEENNIPFEYQL----GEGAFYGPKIEFTLYDCLDRAWQCGTVQLDSYVGEDNERKVPVMAILGSMERFIGILTEE------APVQVVIMNITDSQSEYVNELTQKLSNAGIRVKA----DLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRT-------RRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 402
34 -20.7004p3n_A mol:protein length:415 Threonine--tRNA ligase, cytoplasmic  ali model follow..  15  3......SSSSGDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTS--GHWQHYSENMFSFEVE--KELFALKPMNCPGHCLMFDHRRSWRELPLRLADFGVLHRNELSGA-RVRRFQQDDAHIFCAMEQIEDKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWELNSGDGAF----------------GPKIDIQIKDAIGRYHQ-----CATIQLDFQLPIRF--NLTYVSHDGDDKKRPVIVHRAILGSVERMIALTENYGGK---------------------------SPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPG---CTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRT-------RDNKVHGERTISETIERLQQLKEFRSKQAEE 407
35 -20.7001nyq_A mol:protein length:645 threonyl-tRNA synthetase 1  ali model follow..  16  261.............................AGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTS--GHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKHSYRELPIRIAELGTMHRYEASGA-RVRGMTLNDSHIFVRPDQIKEKRVVNMIIDVYKDFGFEDYSFRLSY-------------------------------RDPEDKEKYFDDDDMWNKA--------------------NMLKEAADELGLSYEEAIG------FYGPKLDVQVKTAMGKEETLST--RFDTYIGQDGEHHRPVVGVVSTMERFVAFLTEE------APKQVQIIPVNVDLHDYARQLQDELKSQGVRVSI----DDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQ-------YGSQDQETVEKDEFIWNLVDEIRLKK..... 643
36 -20.6004ncx_A mol:protein length:506 Proline--tRNA ligase  ali model follow..  13  8ITSKKIENFSDWYTQVIV-KSELIEYYDISGCYILRPAAYYIWECVQAFFNKEIKKLNVENSYFPLFVTKNKLEKEKNH--EGFSPEVAWVTKYGDPEEIAIRPTSETIMYSVFPKWRSYRDLPLKLNQWNTVVRWEKQPTPRTREFLWQEGHTAHKNEEEAVKLILDLYRRWYEEYLAVPIIKGIKSEGEKFGGANFTSTAEAFISENGRAIQAATSHYLGTNFAK-------------------------------------------------------------MFKIEFEDENEVKQYVHQTSW-----------------GCTTRSIGIMIMTHG--PNVSKYKVVIVPIFNAIHSYCKDIEKILKNAQINCVY---DDRASYSPGYKFNHWELRGIPIRIEVGPKDLQNNSCVIVR-------RDNNEKCNVKKESVLLETQQMLVDIHKN... 397
37 -20.4004hwt_A mol:protein length:413 Threonine--tRNA ligase, cytoplasmic  ali model follow..  15  1........MARDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTS--GHWQHYSENMFSFEVE--KELFALKPMNCPGHCLMFDHRRSWRELPLRLADFGVLHRNELSGA-RVRRFQQDDAHIFCAMEQIEDKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWELNSGDGAF----------------GPKIDIQIKDAIGRYHQ-----CATIQLDFQLPIRF--NLTYVSHDGDDKKRPVIVHRAILGSVERMIALTENYGGK---------------------------SPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPG---CTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRT-------RDNKVHGERTISETIERLQQLKEFRSKQAEE 403
38 -20.4005xif_A mol:protein length:500 Prolyl-tRNA synthetase (ProRS)  ali model follow..  11  4VTAKKDENFSEWYTQAI-VRSEMIEYYDISGCYIMRPWAFHIWEKVQRFFDDEIKKMGVENSYFPMFVSRHKLEKEKDH--EGFSPEVAWVTHYGDPEKIAIRPTSETIMYPAYAKWRSHRDLPLKLNQWCSVVRWEKQPTPRTREFLWQEGHTAHATEEEAWELILELYRRWYEECLAVPVIKGEKS-----------------------------------------------------------EGEKFAGGKKTTTVEAFIPENGRGIQAATSHLLGTNF--AKMFEIEFEDEEGHKRLVHQTSW-----------------GCTTRSLGVMIMTHG--PRVASVQVVIIPILGEILGKCRELKTMLEKADIRVRI---DDRSNYTPGWKYNHWEVKGVPLRLELGPKDLAKGTARVVR-------RDTGEAYQISWADLAPKLLELMEGIQRS... 393
39 -20.3005f9y_A mol:protein length:511 Aminoacyl-tRNA synthetase  ali model follow..  11  15....DKITSFADWYSQVIVKSEMIEYYDISGCYILRPWSYFIWETIQSVFDQKIKQHDVQNAYFPIFVTQKKLETEKDH--EGFSPEVAWVTKSGKAEPIAIRPTSETIMYPYFAKWRSHRDLPLKINQWTSIVRWEKHPTPRTREFLWQEGHTAHSTRKEAL-EMVDIILNEYASIYEDLLATPV----VKGTKSENEKFPGGDITKSIEGFIPEIGRAVQAATSHLLGQNFSK-----------------------------------------------------MFGVEFEDEKGNKEYAHQTSWGLTTRAIGV--IMTHGDNKGL-------------PKVAPVQVIIIPIIEEQKKICNEVECILKKAGVRVKID---DRSNYTPGWKYNHWEVKGVCLRFEVGPRDIEKRSVRVVV-------RDNMEKMDIPISELESKIPKLLEEFQNRLLF 404
40 -20.0005xil_A mol:protein length:512 Putative prolyl-tRNA synthetase  ali model follow..  12  23...................KAEMIEYYDVSGCYIIRPWAYYVWKCVQRFLGGKIEKLGVEDCYFPMFVSRSCLEREKDH--EGFAPEVAWVTRAGDEQPVAVRPTSETVMYPYYAKWRSHRDLPVRLNMWNNVIRWESHPTPRTREFLWQEGHCAWAKAEECAKEILECYASVYEQLLAVPVVRGRKTEKEKFAGGDYTTTVETFIEAVGRGCQGATSHNLGQNFGKMFDIR------------------------------------------------------------FQDPENNEQTLIPWQNSWGLSTRVIGVMIMVHGDNRGMVMPPRVASTQVIIIPVGITKDTTEEARQELLASCWRLESELCEGGVRARC---DLRDNYSPGWRFNHWEVKGVPLRVELGPRELAERSLAVA-------VRHSGARHSVAWDAQTPAAVAALLEDVHAQ.. 401
41 -19.8005xip_A mol:protein length:498 Prolyl-tRNA synthetase, putative  ali model follow..  10  5VTAKKSTNFADWYTQVIV-RGELVEYYDISGCYIIRPWAYRIWEAVQKFFDDGIKRLGVENCYFPMFVSQAKLEKEKDH--EGFKPEVAWVTHYGDPEKVAIRPTSETIMYPAYAKWRSHRDLPLKLNQWNNVVRWEKQPTPRTREFLWQEGHTAHATEEEAYTLILELYRQWYEDYLAVPVIKGEKSENE-----------------------------------------------------------KFAGGKKTTTIEGIIPDTGRGIQAATSHLLGQNF--SRMFSIEFEDEKGAKQLVHQTSW-----------------GCTTRSLGVMIMTHG--PRVVAVQAVIIPIIMEIVAKCRELERLLNAAGVRVKVDDRTN---YTPGWKFNDWELKGVPLRLEIGPRDVESCQTRVVR-------RDTSEARNVPWAEAASTIPAMLETMQKD... 394
42 -19.7003a31_A mol:protein length:471 Probable threonyl-tRNA synthetase 1  ali model follow..  13  1MASGQDKTHIDYAYELDITVKPDSRTFTGAGVPLFSLGGGPIRYALAEVLAKFHARRGYYVVETPIIASTELFKVS--GHIEFYRNNMYLFDIE--GHEFAVKPMNCPYHILLFLNERSKLPLPFKVFEFGRVHRYEPSGS-RVRGFTQDDAHIIVPGGRVIDYDVFEEMKLVLERLFKLTFKVRLSMSDKSLIGKEFMGSKEEWEGAE-------------------------------------------------EALREAASRINEKYGIDIVELEGEAAFYGPKLDFEESGVSKEWQMGT--RFR-VVREEFGIEEVYIALLGSIERFLGVYLEH------APIQFAVIAVKTGGEDLASSIAKGLLDKGFRVAVKGSSK---TGLSSDVRHIESTAKPAVVFIGAKEVREKVLDVRV-------FDLESMKRRRLAIAYGDAADAVENLAAVAEE 448
43 -18.8001nj8_A mol:protein length:459 Proline-tRNA Synthetase  ali model follow..  13  2...SHMLEFSEWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKE-AEHIKGFEDEVYWVTKTQLDVKLALRPTSETPIYYMMKLWKVHTDLPIKIYQIVNTFRYEKHTRPLIRLMTFKEAHTAHSTKEEAENQAISIYKKFFDTLGIPYLISKRPE---------------------------------------------------------------WDKFPGAEYTMAFDTIFPDGRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAYQTCYGISDRVIAS--------------IAIHGDEKGLIPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLKGKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFR-------RDTMEKFQVDETQLMEVVEKTLNNIMEN... 385
44 -18.8003ial_A mol:protein length:518 Prolyl-tRNA synthetase  ali model follow..  12  1MAMGGDDTFADWFDAIMDAAELVDRRYPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDH--KGFEAECFWVEKGGLEERLALRPTSETAIYSMFSKWRSYKDLPLKIHQTCTIFRHEKNTKPRVREIHWNEAHCCHATAEDAVSQYWKVIDTIFSDELCFKGQKLRRVCWDRFPGADYSEVSDVVMPCGRV-------------------------------------------------------QTAGIHNLGQRFSSTFDI-----------------------LYANKANESVHPYLTCAGISTRVLACALSIHGDSG-PLIAPIHVVIIPIGCGKKNNQESADTLKSKLGLRVSI---DDDFSKSMGDKLYYYELKGVPLRIEVGQRDLANGQCIVVPRDVGKD-----QKRVIPITEVMKVSSHTTENHELVVKN 409
45 -18.6001qf6_A mol:protein length:642 THREONYL-TRNA SYNTHETASE  ali model follow..  16  238......EAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKT--GHWDNYKDAMFTT--SSENREYCIKPMNCPGHVQIFNQGKSYRDLPLRMAEFGSCHRNEPSGS-RVRGFTQDDAHIFCTEEQIRDNGCIRLVYDMYSTFGFEKIVVKLSTR----------------------------------------PEKRIGSDEMWDRAE--------------ADLAVALEENNIPFEYQL----GEGAFYGPKIEFTLYDCLDRAWQCGTVQLDSYVGEDNERKVPVMAILGSMERFIGILTEE------APVQVVIMNITDSQSEYVNELTQKLSNAGIRVKA----DLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRT-------RRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641
46 -18.4001b76_A mol:protein length:442 Glycine--tRNA ligase  ali model follow..  14  1.AASSLDELVALCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRVYERDDMEGLDASVLTHRLVLHYS--GHEATFADPMVDNAKGGRGLLAYLRPETAQGIFVNFVLDATSRKLGFGIAQIGKAFRNETPRNFRVREFEQMEIEYFVRPGEDEYRYWVEERLKWWQEMGLSRENLVPYQQPPES-------------SAHYAKATVDILYRFPHGSLELEGIAQRTDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDPETG---------KWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVI----------------LVKNRPEITEYAKRLKARLLALGLGRVL----YEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSTVTVRD-------RDTMEQIRLHVDELEGFLRERLR........ 441
47 -18.2003ugq_A mol:protein length:460 Threonyl-tRNA synthetase, mitochondrial  ali model follow..  14  15MASATKNASSATPATMTSMVSQRQDLPLSPGSMFFLPNGAKIFNKLIEFMKLQQKKFGFNEVVTPLIYKKTLWEKS-GHWENYADDMFKVETTDEEKEEYGLKPMNCPGHCLIFGKKRSYNELPLRFSDFSPLHRNEASGA-RLRKFHQDDGHIFCTPSQVKSFNSLKLIDIVYNKIFPFVKGGSGAESNY--------------------------FINFSTRPDHFIGDLKVWNHA--------------------QVLKEILEESGKPWKLNP----GDGAFYGPKLDIMVTDHLRKTHQVATIQLDKFKDQDNSYKRPIMATFGSIERFMALLIDS------NPYQAVIIPVNTKNVQQLDMCPVPLNDWHFNVDL----DIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKS------FEKLTMSQIWEKFIELEKNYK..... 454
48 -18.1001nj1_A mol:protein length:501 Proline-tRNA Synthetase  ali model follow..  15  29...EKMTEFSEWFHNILEEAEIIDQRYPVKGMHVWMPHGFMIRKNTLKILRRILDR-DHEEVLFPLLVPEDELAKEAIH--KGFEDEVYWVTLSKLQRKLALRPTSETVMYPMFALWRSHTDLPMRFYQVVNTFRYETKHT-VREITTFKEAHTIHATASEAEEQAVEIYKEFFNSLGIP---------------------------------------------------------YLITRRPPWDKFPGSEYTVAFDTLMPDGKTLQIGTVHN------LGQTFARTFEIKFETPEGDHEYVHQTCYGLSDRVIAS--------------IAIHGDESGLCPDVAAHQVVIVPIAEEVMEACRELRSRLEAAGFRVHL----DDRDIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVIS-------RRDTGEKVTADLQGIEETLRELMKDILEN... 412
49 -17.1001v95_A mol:protein length:130 Nuclear receptor coactivator 5  ali model follow..  16  4.......................................................................................................................................................................................................................................................................................................................................................GSSGPVDCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFLNT--EVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQ-----EHRNMPQADAMVLVARNYERYKNECRE 114
50 -15.4001ati_A mol:protein length:505 GLYCYL-TRNA SYNTHETASE  ali model follow..  14  87MVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWTPP--RYFNMMFQDLRG-PRGGRGLLAYLRPETAQGIFVNFVLDATSRKLGFGIAQIGKAFRNETPRNFRVREFEQMEIEYFVRPGEDEYRYWVEERLKWWQEMGLSRENLVPYQQPPES-------------SAHYAKATVDILYRFPHGSLELEGIAQRTDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDPETG---------KWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVI----------------LVKNRPEITEYAKRLKARLLALGLGRVL----YEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSTVTVRD-------RDTMEQIRLHVDELEGFLRERLR........ 504
51 -12.7003p8t_A mol:protein length:294 AsnS-like asparaginyl-tRNA synthetase related protein  ali model follow..  12  1.........................MNAVEIISRDIYKAIDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRPAEVDVYGVRM---RLTHSMILHKQLAIAMGLE--------KIFVLSPNIRLESRRKDDGREFTQLDFEIEGAK------DVMRLIEELIYGL-------KAEEWTGREFPRARHFKVYDYKDILEEFGSDEKASMEMEEPFWIVNIPREFYDREENGVWKNYDLIGGEREWEYEKIVAKIRAAGLK-------EDSFRPYLEIA------------------RA--------GKLKPSAGAGIGVERLVRFI............................................................................................................................ 272
52 -12.4002pme_A mol:protein length:693 Glycyl-tRNA synthetase  ali model follow..  14  43.ELKARKRVLEAKELALQPKDDIVDRAKMSGLYDFGPVGCALKNNIIQTWRQHFQEEQILEIDCTMLTPEPVLKTSVDKFADFMVKECFTFIGPGGNMPGYLRPETAQGIFLNFLLEFNQGKLPFAAAQIGNSFRNESPRSGRVREFTMAEIEHFVDPSEKDHPKFIGRIYLYLTKVGISPDKLRFRQH--MENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLLNEKGEFTIETEG-LTKDFQKTLYVEEVVPNV--SFGLGRIMYTVFEHTFHVREGKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKV----DDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTTATLRD-------RDSMRQIRAEISELPSIVQDLANGNIT.... 661
53 -12.2001nnh_A mol:protein length:294 asparaginyl-tRNA synthetase-related peptide  ali model follow..  14  1.........................MNAVEIISREISPTLDIQTKILEYMTDFFVKEGFKWLLPVIISPIPLWPDPAGEGMEPAEVEIY-------GVKMRLTHSMILHKQLAIAMG--------KIFVLSPNIRLESRQKDDGREFTQLDFEVERAK------DIMRLIERLVYGLKAEEWTGREFPKTKRFEVFEYSEVLEEF--------SDEKASQEMEEPFWIINIPREFYDREVDGFWRNYDLIGGEREWEYEKIVAKIRKAGLN-------EDSFRPYLEI-------------------KA--------GKLKPSAGAGIGVERLVRFI............................................................................................................................ 272
54 -11.9004h2w_A mol:protein length:346 Amino acid--[acyl-carrier-protein] ligase 1  ali model follow..  14  19VLPNSPDTAPQIADPLDHLADKLFHSMGSDGVYARTALYESIVERLAALITSHRE-AGTEALRFPPVMSRAQLEKS-GYLKSFPNLLGCDWTTSLSPADLVLSPAACYPVYPIAASRGPLPKGGLRFDVAADCFRREPSKH-RLQSFRMREYVCIGTPDDVSDFRWMVRAQAIARDLGLTFRVDYASD---------------PFFGR-------------AGKMLANNQRDQQLKFELLIPLRSEEQPTACMSFNYHR-----------------------EHFGTT-WGIQDANGEPAHTGCVA---------------------FGMDRLAVAMFHTHGTDLSAWPAKVRDILGLQPHVAAGAHGEGWR......................................................................................... 340
55 -11.9003mey_A mol:protein length:346 Bll0957 protein  ali model follow..  15  19VLPNSPDTAPQIADPLDHLADKLFHSMGSDGVYARTALYESIVERLAALITSHRE-AGTEALRFPPVMSRAQLEKGLHGTEREINAAV-DWTTSLSPADLVLSPAACYPVYPIAASRGPLPKGGLRFDVAADCFRREPSKH-RLQSFRMREYVCIGTPDDVSDFRWMVRAQAIARDLGLTFRVDYASD---------------PFFGR-------------VGQMKAVSQKQQQLKFELLIPLRSEEQPTACMSFNYHR-----------------------EHFGTT-WGIQDAN---------------------GEPAHTGCVAFGMDRLAVAMFHTHGTDLSAWPAKVRDILGLQPHVAAGAHGEGWR......................................................................................... 340
56 -11.7003m4p_A mol:protein length:456 Asparaginyl-tRNA synthetase, putative  ali model follow..  11  119..IGESPIDLENIINKDSSIPQKMQNRHIVIRSEHTQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGGSTLFKLQYFNEPAY----------LTQSSQLYLESVIASLG---------KSFCMLSSYRAEQSRTVRHAEYLHLEAELPFIS------DLLNHLEDLVCTV--------------IDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYADAIKYCNDHGILNKDKPFEYGEDISEKPERQMTDEIGCPIFMIHFPSKMK-HPDLTESVDLLMPGVGE-----------IVGGSMYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRK.................................................................................................................... 443
57 -11.5003i7f_A mol:protein length:548 Aspartyl-tRNA synthetase  ali model follow..  12  205EYAKLLKEKASAQKYVKVSQDTRLDNRMLDLRTVTNIAIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSSEGGSNIFEVKYFDRKAY----------LAQSPQL---YKQMAIMGDFR-----KVFEVGPVFRAENSNTRRHTEFEGLDIEMEIVEN-----ECIDVMEKLFTFI-PKRFPDELKVIRKQYPRLTYKEAIEMLRASGETGDYDDFTTPQEVKLGELIKAKYNTDFYILDKFPAAIRPFYTMPDIDDPNYSNSYD-----------FVRGQEITSGAQPEFLMKRCIEKGV----ATLKDYIESFRFGSWPHAGCGIGLERITMLYLGIPNIRK.................................................................................................................... 535
58 -11.4001n9w_A mol:protein length:422 aspartyl-tRNA synthetase 2  ali model follow..  14  125.......................................LKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGLFGVDYFEKRAY----------LAQSPQLYKQIMVGVFE---------RVYEVAPVWRMEEHHTSRHNEYLSLDVEMGFIAD-----DLMRLEEALLAEMEIRLLGATWPSFPQDIPRLTHAEAKRILKEELGYPVGQDLSEEAERLLGEYAKERWGSDWLFVTRYPRSVRPFYTYPEED-----GTTRSFDL-------LFRGLEITSGGQRIHRYEELLESLKAKG-EAFHGYLEVFKYGMPPHGGFAIGAERLTQKLLGLPNVRY.................................................................................................................... 409
59 -11.4002g4c_A mol:protein length:474 DNA polymerase gamma subunit 2  ali model follow..  77.............................GCHPGFGPLGVELRKNLAAEWWTVVFREQVFPVDALHHKPGPLLPGD--QDKELSKEQLVTFLENVLKTSGKLRENLLHGALEHYCLDLVNKRLPYGLAQIGVCFHPVFDTKQSIGEKTEASLVWFTPPRTSNQDFWLRHRLQWWRKFAMSPSNFSSSDCQDEEGRKGNKLYYN-------------------------------------ELIETLWNLGDHELLHMYPGNVSKLHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSFTRKK--------------------NLHRKVLKLHPC--LAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVWPGYLET-MQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRS-------RDTTMKEMMHISKLKDFLIKYISSAKN.... 467
60 -11.3005xix_A mol:protein length:472 Asparagine--tRNA ligase, cytoplasmic  ali model follow..  12  164.......................................LKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF----------LTQSSQLYLETCLPALG---------DVFCIAQSYRAEQSRTRRHAEYTHVEAECPFLT------DLLNRLEDLVCDV-LKSPAGSIVHELNPNFQPPKRPFKRMNYSDAIVWLKEHDVKKEDGTFYEFGEDIPEAPERLMTDTPILLCRFPVEIKSFYMQRCP-----------DSRLTESVDVLMPNVGE-----------IVGGSMYYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRD.................................................................................................................... 453
61 -11.2001g5h_A mol:protein length:454 MITOCHONDRIAL DNA POLYMERASE ACCESSORY SUBUNIT  ali model follow..  11  23.AREALVDLCRRRHFLSGTPQQLSTAALLSGCHRFGPLGVELRKNLASQWWSSMVVFREQVFAVDSLHQEPGSSQPRDSAFRLVKEQLVAFLENLLKTSGKLRATLLHGALEHYCLDLVNRKLPFGLAQIGVCFHPVSNSN-RVGEKTEASLVWFTPTRTSSQDFWLRHRLLWWRKFAMSPSNFSSADCQDELGRKGSK-----------------------------LYYSFPWGKEPIETLWNLGDQ---ELLHTYPGNVSTIQGRDGRKNVVPCVLSVSGDVDLGTLAYLYDSFQLAENSFARKK----------------------SLQRKVLKLHPCLAPIKVALDVGKGPTVELRQVCQGLLNELLENGISVWPGYSET-VHSSLEQLHSKYDEMSVLFSVLVTETTLENGLIQLRS-------RDTTMKEMMHISKLRDFLVKYLASASN.... 442
62 -11.1005c51_B mol:protein length:485 DNA polymerase subunit gamma-2, mitochondrial  ali model follow..  94.............................GCHPGFGPLGVELRKNLAAEWWTVVFREQVFPVDALHHKPGPLLPGD--QDKELSKEQLVAFLENVLKTSGKLRENLLHGALEHYCLDLVNKRLPYGLAQIGVCFHPVFDTK-SIGEKTEASLVWFTPPRTSNQDFWLRHRLQWWRKFAMSPSNFSSSDCQDEEGRKGNKLYYN-------------------------------------ELIETLWNLGDHELLHMYPGNVSKLHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSFTRKK--------------------NLHRKVLKLHPC--LAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVWPGYLET-MQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRS-------RDTTMKEMMHISKLKDFLIKYISSAKN.... 484
63 -11.1003g1z_A mol:protein length:326 Putative lysyl-tRNA synthetase  ali model follow..  13  1..............................GMSETATPNLLKRAAIMAEIRRFFADRGVLEVETPCMSHLFPFETRFVGPGHSQGINLY----------LMTSPEY---HMKRLLAAGCG-----PVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCQPAESLSYQ---------QAFQRHLEIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMG--VEPHIGKEKPTFIYHFPASQASLAQISTEDHRVAERFEVYYKGI-ELANGFHELTDAREQQQRFQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLAD.................................................................................................................... 317
64 -11.1001wyd_A mol:protein length:429 hypothetical aspartyl-tRNA synthetase  ali model follow..  12  95LSKAKAPLPLDVSGKVKADIDTRLRERVLDLRRQEMQAVIKIQSLALKAFRETLYKEGFIEIFTPKIIASATEGGAQLFPVIYFGKEAF----------LAQSPQLYKELMAGVVE---------RVFEVAPAWRAEESDTPFHAEFISMDVEMAFAD------DVMQLLEKILHNI--------------VKTIKEEGKEELKILNYEPPEVKIPIKRLKYTEAIEILRSKGYNIKFGDDIGTPELRILNEELKEDLYFIVDWPSDARPFYTKNPELSESFDLIYK-------------LEIVSGSTFEFFLKWFDYGMPPHAGFGMGLARLMVMLTGIQSVKE.................................................................................................................... 416
65 -10.9001asy_A mol:protein length:490 ASPARTYL-tRNA SYNTHETASE  ali model follow..  12  181.......................................FRIQAGVCELFREYLATKKFTEVHTPKLLGAPSEGGSSVFEVTYFKGKAY----------LAQSPQF---NKQQLIVADFE-----RVYEIGPVFRAENSNTHRHTEFTGLDMEMAFEEH-----EVLDTLSELFVFI-PKRFAHEIELVRKQYPVEEFKLPKDGKMVRLT------------KEGIEMLRAAGKEIGDFEDLSTENEKFLGKLVRDKYDTDFYILDKFPLEIR-NPKYSNSYDFFMR--HALLQERMKAHGLSPEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRR.................................................................................................................... 477
66 -10.8005x6c_A mol:protein length:553 O-phosphoserine--tRNA(Cys) ligase  ali model follow..  10  135.............................................DIDEEKKERLREVLHLYKKGAIDGDDLVFEIAEMGLKVLETAFPEFKLKPESTTLTLRSHMTSGWFITLSSLIKKRKLPLKLFSIDRCFRREQ-DRSHLMSYHS--ASCVVVGEDVSVDDGKVVAEGLLAQFGFTKFKFKPDEKKSKYYTPETQTEVYAYHPKLGEWIEVATFGVYSPIALAKYNIDVERLAMIIYGYEDVRAMVYPQ---YEYRLSDRDIAGMIRVDKVPILDEFYNF-ANELIDICIANKDKESP------KREFNFNGERRVIKVEIFENEPNKKLLGPSVLNEVYVYDGNIYGIPPTFEGVKEQYIPILKKAKEEGVSTNI---------RYIDGIIYKLVAKIEEALVSNVDEFKFRVPIVRSIDELALKQIMGENKVIDVRPVFLNAKVEIK........ 553
67 -10.8004ztu_B mol:protein length:472 DNA polymerase subunit gamma-2, mitochondrial  ali model follow..  10  71..............................CHPGFGPLGVELRKNLAAE-EQVFPVDALHHKPGPLLPGDSAFRLVSAEDKELSKEQLVAFLENVLKTSGKLRENLLHGALEHYCLDLVNKRLPYGLAQIGVCFHPVFDTKQSIGEKTEASLVWFTPPRTSNQDFWLRHRLQWWRKFAMSPSNFSSSDCQDEEGRKGNKLYYN-------------------------------------ELIETLWNLGDHELLHMYPGNVSKLHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSFTRKK--------------------NLHRKVLKLHPC--LAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVWPGYLET-MQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRS-------RDTTMKEMMHISKLKDFLIKYISSAKN.... 460
68 -10.6001b8a_A mol:protein length:438 PROTEIN (ASPARTYL-TRNA SYNTHETASE)  ali model follow..  12  98LNRAETPLPLDPTGKVKAELDTRLNNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGTELFPMKYFEEDAF----------LAESPQL---YKEIMMASGLD-----RVYEIAPIFRAEEHNTTRHNEAWSIDSEMAFIED-----EVMSFLERLVAHAELDILNFELEEPKLPFPRVSYDKALEILGDLGKEPWGEDIDTEGERLLGKYMMENENAPLYFLYQYPSEAKPFYIMKYDNKPEICRAFD-----------EYRGVEISSGGQREHRHDILVEQIKEKG-ESFEFYLKAFRYGMPPHGGFGLGAERLIKQMLDLPNIRE.................................................................................................................... 425
69 -10.6004j15_A mol:protein length:521 Aspartate--tRNA ligase, cytoplasmic  ali model follow..  15  210.......................................FRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSYFKNNAY----------LAQSPQL---YKQMCICADFE-----KVFSIGPVFRAEDSNTHRH-EFVGLDIEMAFNYH-----EVMEEIADTMVQI------------GLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVR-NPKQSNSYDMFMR-------------EEILSGAQIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQ.................................................................................................................... 502
70 -10.6002rhq_A mol:protein length:294 Phenylalanyl-tRNA synthetase alpha chain  ali model follow..  13  10...PRGSHMGTELMEKLNQQLAEETIDVTLPSRQISIGSKHPLTRTVEEIEDLFLGLGYEIVDGYEVEQDYYNFEALNLPKSHPARDMQD------TDEILMRTHTSPVQARTMEKRN--GQGPVKIICPGKVYRRDSDDATHSHQFTQ--IEGLVVDKNIKMSDLKGTLELVAKKLFGADREIRLR--------------------------------------------------------PSYFPFT------------------------EPSVEVDVSCFKCKGKGCNVCKHTGWIEILGAGMVHNVLEMAGSNEYSGFAFGMGPDRIAMLK............................................................................................................................ 260
71 -10.5005w25_A mol:protein length:616 Aspartate--tRNA(Asp/Asn) ligase  ali model follow..  12  117LTVLGECAPLPFQLDEPAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRST------GARDFLVPARLHP------GSFYAL-PQSPQLFKQLLMVAGME-----RYYQIARCYRDEDFRADRQPEFTQLDMEM----SFVDAEDIIAISEEVLTEL----WALIGYRIPTPIPRIGYAEAMRRFGTDKPDPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIANRLGLIDPDAWAFESDTGSVLADAY-----------DIVCNGHEIGGGKFGFLLEAFMFGAPPHGGIAFGWDRTTALLAGMDSIR-----EVIAFPKTGGGVDPLTDAPAPITAQQRK.................................................................................... 596
72 -10.4003a5y_A mol:protein length:345 Putative lysyl-tRNA synthetase  ali model follow..  13  28.....................................PNLLKRAAIMAEIRRFFADRGVLEVETPCMSHLVPFETRFVGPGHSQGMNLW----------LMTSPEYH---MKRLLVAGCG-----PVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQ---------QAFLRYLEIDPLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFG--VEPNIGKEKPTFVYHFPASQASLAQISTEDHRVAERFEVYYKGI-ELANGFHELTDAREQQQRFQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAE.................................................................................................................... 330
73 -10.4004rmf_A mol:protein length:609 Aspartate--tRNA(Asp/Asn) ligase  ali model follow..  12  98LTVLGESAPLPFQLDEQAGEEARLKYRYLDLRREGPGNALRLRSKVNAAARSVLAEHDFVEIETPTLTRST------GARDFLVPARLQP------GSFYAL-PQSPQLFKQLLMVAGME-----RYYQIARCYRDEDFRADRQPEFTQLDMEM----SFVEADDVIAISEQVLKAV----WATIGYDLPLPLPRISYEEAMRRFGSDKPDPVAKNLSDAERDGLVAHVGANPGDCIFFAAGPAKGARALLGATRIEIAKRLDLIDPNAWAFDSDPGNALSDAY-----------DIVCNGNEIGGGKFGFLLDAFSYGAPPHGGIAFGWDRITALLAGVDSIR-----EVIAFPKSGGGVDPLTDAPAPITPQQRKIDAKPREDKPKEDAKSKAAAALE............................................................. 603
74 -10.4002xti_A mol:protein length:437 ASPARAGINYL-TRNA SYNTHETASE, CYTOPLASMIC, PUTATIVE  ali model follow..  11  112.................ASVDKMLDNRHLVIRGENAAALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGGSTLFNLDYFGEQSF----------LTQSSQLYLETCIPTLG---------DVFCIAQSYRAEKSRTRRHAEYAHVEAECPFIT------DLMEKIEELVCDT--AKKLLEHINPKFQPPERPFLRMEYKDAIKWLQEHNVENEFGNTFTYGEDIAEAAERFMTDTINKPILLNRFPSEIKAFYMQRDA-----------DNTLTESVDLLMPGVGE-----------IVGGSMYYWYLDQRLYGTCPHGGYGLGLERFICWLTNTNHIRD.................................................................................................................... 424
75 -10.1001x54_A mol:protein length:434 Asparaginyl-tRNA synthetase  ali model follow..  10  98..IQAVSEFPIPENPEQASPELLLDYRHLHIRTPKASAIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVEGGATLFKLKYFDKYAY----------LSQSAQLYLEAAIFGLE---------KVWSLTPSFRAEKSRTRRHTEFWHLELEAAWMD------DIMKVEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPSYDEAIDILQSKGVNVEWGDDLGADEERVLTEEFDRPFFVYGYPKHIKAFYMKEDP--NDPRKVLASDMLAPEGYGEIIGGSQREDDYDKLLNRILEEGKDYEWYLDLRRYGSVPHSGFGLGVERLVAWVLKLDHIRW.................................................................................................................... 421

FFAS is supported by the NIH grant R01-GM087218-01
1 2 7 4 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sasin JM, Godzik A, Bujnicki JM. SURF'S UP! - protein classification by surface comparisons. J Biosci. 2007 Jan;32(1):97-100.