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Query: 4up7_A mol:protein length:777 LYSINE--TRNA LIGASE, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MMLSKQLFLNRCKDVEEYQKAGHNPWPHKFNVSITVPEFIAKYSGLEKSQVSDDIVSVAGRVLSKRSSSSALMFIDLHDSQTKLQIMLNKSAYENKEDFVSLTKMIYRGDICGFTGHPTRTKTGELSLIPISGMILSPCLHMLPSMHYGLGDQETRFRKRYLDLIVNPESVKNFVLRTKVVKAVRKYLDDKGFLEVETPILNTIPGGATARPFITHHNQLDIQMYMRIAPELYLKELVVGGINRVYEIGRLFRNEGIDQTHNPEFTTCEFYMAYADYNDIMKMTEELLGNMVKDITGGSTKLEIKDRLMDINNEEDIKMLEKFFKEPIPRPFNSAECSKVIEKHCTELNYYYDGNNEKAMKKLFADFVTEKKMVLDFTAPFKRISYVHALEEKFGEKIPRPLDGPEALTFLKKQAIRFNAICAEPQTTARVMDKLFGDLIEVDLVQPTFVCDQPQLMSPLAKYHRSEPELTERFELFILKREIANAYTELNNPIVQRSNFEQQAKDKAAGDDEAQLVDEVFLDAIEHAFPPTGGWGLGIDRLAMLLADVDNIKEVILFPTMRPEDELEKKAREAKEDAMVAQELAATEEKGGKKVVKPKANKQQPVKEVLDGFQLEIRVGKIVEAGPHPNSEHLLALKVDVGEEKPRSVVAGLAEHYKPEELLNQKATFVCNLKPSKLRGVASEAMILAATSLDGTKVKFCHPSADAAIGAQVIPKEGKVTISAKKISIDVVGKMNLALKGGLVRTNDVPLIVKDTELTVTVDEVIDGTVRLast
1 -249.0004up7_A mol:protein length:777 LYSINE--TRNA LIGASE  ali model  100  1MMLSKQLFLNRCKDVEEYQKAGHNPWPHKFNVSITVPEFIAKYSGLEKSQVSDDIVSVAGRVLSKRSSSSALMFIDLHDSQTKLQIMLNKSAYENKEDFVSLTKMIYRGDICGFTGHPTRTKTGELSLIPISGMILSPCLHMLPSMHYGLGDQETRFRKRYLDLIVNPESVKNFVLRTKVVKAVRKYLDDKGFLEVETPILNTIPGGATARPFITHHNQLDIQMYMRIAPELYLKELVVGGINRVYEIGRLFRNEGIDQTHNPEFTTCEFYMAYADYNDIMKMTEELLGNMVKDITGGSTKLEIKDRLMDINNEEDIKMLEKFFKEPIPRPFNSAECSKVIEKHCTELNYYYDGNNEKAMKKLFADFVTEKKMVLDFTAPFKRISYVHALEEKFGEKIPRPLDGPEALTFLKKQAIRFNAICAEPQTTARVMDKLFGDLIEVDLVQPTFVCDQPQLMSPLAKYHRSEPELTERFELFILKREIANAYTELNNPIVQRSNFEQQAKDKAAGDDEAQLVDEVFLDAIEHAFPPTGGWGLGIDRLAMLLADVDNIKEVILFPTMRPEDELEKKAREAKEDAMVAQELAATEEKGGKKVVKPKANKQQPVKEVLDGFQLEIRVGKIVEAGPHPNSEHLLALKVDVGEEKPRSVVAGLAEHYKPEELLNQKATFVCNLKPSKLRGVASEAMILAATSLDGTKVKFCHPSADAAIGAQVIPKEGKVTISAKKISIDVVGKMNLALKGGLVRTNDVPLIVKDTELTVTVDEVIDGTVR 771
2 -139.0005hgq_A mol:protein length:524 Lysine--tRNA ligase  ali model follow..  49  5.SDPQEYFKLRTALINERRSKGINPYPHKFHVSISLADFIAKYNSLEKDVINDIVQSVAGRVFSKRESGGKLIFYDLHGEGTRLQVLANARFHSGDEAFDNLHDRIKRGDIIGVNGYPARSKSGELSIIPYEIIQLTPCLHMLPHTHFGLKNQETRYRMRYLDLIMNPDVKNRFVTRSRMISFLRRYLDNLGFLEVETPMMNLIAGGATAKPFITHHNDLDMDLYLRVAPELYLKMLVVGGIDRVYEIGRVFRNEGIDQTHNPEFTSCEFYMAYADYEDLMKITEDMLARMVYYMHGTYKIQENPVYEVDFTPPFRKVNIYDGLQEKLGIQFPPADTLDTDEAN----------------------KFFDKLAVENNVECPAPRTTARLLDKLIGEFLEPTFISPTFLTG------------------------------------------HPQIMSPLAKWHRSIPGLTERFELFVVTKEIVNAYTELNDPLTQRLRFDEQAKQKQAGDDEAQNIDENYCTALEYGLPPTAGWGMGIDRLAMILTDSNNIKEVLFFPAMRPDEKGTNVLDEGGNA.................................................................................................................................................................................................. 524
3 -139.0005eln_A mol:protein length:535 Lysine--tRNA ligase  ali model follow..  46  12.GPGSHYTDNRYKMMECIKDAGRPFYPHKFKISMSLPAYALKYGNVENGYDKDTTLSLSGRVTSIRSSSSKLIFYDIFCEEQKVQIIANIMEHDSTGEFSVSHSEIRRGDVVGFTGFPGKSKRGELSLFSKSVVLLSPCYHMLPTAISGLKDQEVRYRQRYLDLMLNEESRKVFKLRSRAIKYIRNYFDRLGFLEVETPMLNMIYGGAAARPFITYHNELETQLYMRIAPELYLKQLIVGGLDKVYEIGKNFRNEGIDLTHNPEFTAMEFYMAYADYYDLMDLTEELISGLVLEIHGSLKIPEGKCIEIDFTTPWKRFSFVEEIESGLGEKLKRPLDSQENIDFMVEM------------------------CEKHEIELPHPRTAAKLLDKLAGHFVETKCTNPSFIID------------------------------------------HPQTMSPLAKWHREKPEMTERFELFVLGKELCNAYTELNEPLQQRKFFEQQADAKASGDVEACPIDETFCLALEHGLPPTGGWGLGIDRLIMFLADKNNIKEVILFPAMRNVKQNAQHSNQHSGN.................................................................................................................................................................................................. 529
4 -139.0003bju_A mol:protein length:521 Lysyl-tRNA synthetase  ali model follow..  47  3.VDPNQYYKIRSQAIHQLKVNGEDPYPHKFHVDISLTDFIQKYSHLQPGDHTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTEGQAYDVDFTPPFRRINMVEELEKALGMKLPETNLFETEETR----------------------KILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTCINPTFICD------------------------------------------HPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMKPEDKKENLE........................................................................................................................................................................................................ 515
5 -136.0006chd_A mol:protein length:597 Lysine--tRNA ligase  ali model follow..  46  71.VDPNQYYKIRSQAIHQLKVNGEDPYPHKFHVDISLTDFIQKYSHLQPGDHTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTEGQAYDVDFTPPFRRINMVEELEKALGMKLPETNLFETEETR----------------------KILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTCINPTFICD------------------------------------------HPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMKPEDKKENVATTDTLESTTVGTSV.......................................................................................................................................................................................... 597
6 -135.0004ex5_A mol:protein length:529 Lysine--tRNA ligase  ali model follow..  37  28.ADENQIVAERRDKLRALRDQG-IAYPNDFQPTHHAADLQTAYADADKEAAKSLEVAIAGRMMLKRVMGK-ASFATVQDGSGQIQFFVTPADVG--AETYDAFKKWDLGDIVAARGVLFRTNKGELSVKCTQLRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRTTFRARTKAIASIRKFMGDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMEMFLRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATI-QYQGRELDLAQPFHRLTITQAIQKYAPSYTDGQLSDDA-----------------------FLRSELKRLGVDVTQPAFLNAGIGALQLALFEETAEAQLWEPTFIID------------------------------------------YPIEVSPLARESDTVAGITERFELFITGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVLLFPHLRRED.............................................................................................................................................................................................................. 523
7 -135.0003a74_A mol:protein length:493 Lysyl-tRNA synthetase  ali model follow..  40  3.EELNDQLRVRREKLKKIEELGVDPFGKRFERTHKAEELFELYGDLSKEEEQQIEVAVAGRIMTKRGMGK-AGFAHIQDVTGQIQIYVRQDDVG--EQQYELFKISDLGDIVGVRGTMFKTKVGELSIKVSSYEFLTKALRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKKTFITRSLIIQSMRRYLDSHGYLEVETPMMHAVAGGAAARPFITHHNALDMTLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNPEFTMLELYEAYADFRDIMKLTENLIAHIATEVLGTTKI-QYGEHLVDLTPEWRRLHMVDAIKEYVGVDFWRQMSDEEARELAKEHGVEVA----------------------------PHMTFGHIVNEFFEQKVEDKLIQPTFIYG------------------------------------------HPVEISPLAKKNPDDPRFTDRFELFIVGREHANAFTELNDPIDQRQRFEEQLKEREQGNDEAHEMDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMRHK............................................................................................................................................................................................................... 493
8 -134.0004ycv_A mol:protein length:516 Lysine--tRNA ligase  ali model follow..  42  3.VDPRLYFENRSKFIQDQKDKGINPYPHKFERTISIPEFIEKYKDLGNGEHEDTILNITGRIMRVSASGQKLRFFDLVGDGEKIQVLANYSFHNHEKNFAECYDKIRRGDIVGIVGFPGKSKKGELSIFPKETILLSACLHMLPMKY-GLKDTEIRYRQRYLDLLINESSRHTFVTRTKIINFLRNFLNERGFFEVETPMMNLIAGGANARPFITHHNDLDLDLYLRIATELPLKMLIVGGIDKVYEIGKVFRNEGIDNTHNPEFTSCEFYWAYADYNDLIKWSEDFFSQLVYHLFGTYKISENQPIEIDFTPPYPKVSIVEEIEKVTNTILEQPFDSNETIEKMINI------------------------IKEHKIELPNPPTAAKLLDQLASHFIENKY-----------------------------------------NDKPFFIVEHPQIMSPLAKYHRTKPGLTERLEMFICGKEVLNAYTELNDPFKQKECFKLQQKDREKGDTEAAQLDSAFCTSLEYGLPPTGGLGLGIDRITMFLTNKNSIKDVILFPTMRPAN.............................................................................................................................................................................................................. 508
9 -134.0006aqh_A mol:protein length:508 Lysine--tRNA ligase  ali model follow..  35  11.PDLPEQFRIRQAKRADLLAQGRQPYPVDVPRTHTLLEIRQAYPDLPVDARTGEIVGVTGRVVFARNSGK-LCFATLQEGDGQLQAMISLAEVGQ-EALDNWKTYVDIGDIVFVHGEVITSKRGELSVLADSWQMAAKALRPLPVAHKEM-SEESRVRQRYVDLIVRDQARKVARQRIAVMRAIRSALERRGFLEVETPMLQTLAGGAAARPFVTHSNALDTELYLRIAPELFLKRCLVGGFERVFELNRVFRNEGADSTHSPEFVMLETYQAYGTYDDSAVVTRELIQEVADEAIGTRQVPLPDGTVYDLDGEWESIQMYPSLSEALGEEITPDTPAETLWAIADRLGLD--------------------------IPRDRGYGHGKLVEELWEHTVGAKLWAPTFVKD------------------------------------------FPVETTPLTRSHRSIPGVTEKWDLYVRRIELATGYSELTDPIIQRERFEAQARAAAAGDDEAMALDEDFLAALEYGMPPSTGTGMGIDRLMMTLTGL-SIRETVLFPIVKPR............................................................................................................................................................................................................... 502
10 -134.0005vl1_A mol:protein length:506 Lysine--tRNA ligase  ali model follow..  36  8.SNIPEQFRIRRDKRARLLAEGYDPYPVAIERTHTLAEIRATYADLPTDSATEDIVGVAGRVVFARNTGK-LCFATLQDGDGQLQAMISLDEVGR-ESLDRWKADVDIGDVVYVHGTVISSRRGELSVLADSWRMAAKALRPLPVAHKEM-SEESRVRQRYVDLIVRPQAREVARQRIAVIRAVRNALERRGFLEVETPMLQTLAGGAAARPFVTHSNALDIDLYLRIAPELFLKRCIVGGFDRVFELNRVFRNEGSDSTHSPEFSMLETYQTYGTYDDSALITRELIQEVADEAIGTRQLSMPDGSVYDIDGEWATMEMYSSLSEALGEQITPETTVARLRDIASGLDVEIDN---------------------------SVFGHGKLVEELWEHAVGNKLTAPTFVKD------------------------------------------FPVETTPLTRQHRSIPGVTEKWDLYVRGVELATGYSELNDPVVQRDRFADQARAAAAGDDEAMQLDEDFLTALEYGMPPCTGTGMGIDRLLMCLTGL-SIRETVLFPIVRPHSN............................................................................................................................................................................................................. 500
11 -134.0001bbu_A mol:protein length:504 PROTEIN (LYSYL-TRNA SYNTHETASE)  ali model follow..  38  11VVDLNNELKTRREKLANLREQG-IAFPNDFRRDHTSDQLHAEFDGKENEEALNIEVAVAGRMMTRRIMGK-ASFVTLQDVGGRIQLYVARDDLPE-GVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEV-TYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAI---------------------------AESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITE------------------------------------------YPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK.............................................................................................................................................................................................................. 504
12 -134.0001e1o_A mol:protein length:504 LYSYL-TRNA SYNTHETASE, HEAT INDUCIBLE  ali model follow..  38  12.IDFNDELRNRREKLAALRQQG-VAFPNDFRRDHTSDQLHEEFDAKDNQESLNIEVSVAGRMMTRRIMGK-ASFVTLQDVGGRIQLYVARDSLPE-GVYNDQFKKWDLGDIIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKV-TYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKAL---------------------------AESIGITVEKSWGLGRIVTEIFDEVAEAHLIQPTFITE------------------------------------------YPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFPAMRPQK.............................................................................................................................................................................................................. 504
13 -122.0001efw_A mol:protein length:580 ASPARTYL-TRNA SYNTHETASE  ali model follow..  19  1.............................MRRTHYAGSLRE--------THVGEEVVLEGWVNRRRDLGG-LIFLDLRDREGLVQLVAHPASPATAERVRPEWVVRAKGLVRLRPEPNPRLATGRVEVELSALEVLAEAKTPPFPVDAGWASEELRLKYRYLDLR-RRRMQENLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEGARDFLVPYRHEPGLFYALPQSPQLFKQMLMVAGLDRYFQIARCFRDEDLRADRQPDFTQLDLEMSFVEVEDVLELNERLMAHVFRELSYEEAMERYGSDKPDLRFGLELKEVGPLFRQSGFRVFQEAESVKASRKEVAELEEVAKRHKAQGLAWARVEEGGFSGGVAKFLEPVREALLQATEARPGDTLLFVAGPRKVAATALGAVRLRAADLLGLKREGFRFLWVVDFPLLEWDEEEEAWTYMHHPFTSPHPEDKDPGRVRALAYDLVLNGVEVGGGSIRIHDPRLQARVFRLLGI----GEEEQREKFGFFLEALEYGAPPHGGIAWGLDRLLALMTGSPSIREVIAFPKNKEGKDPLTGAPSPVPEEQLRELGLMVVRP..................................................................................................................................................................................... 580
14 -120.0004ah6_A mol:protein length:617 ASPARTATE--TRNA LIGASE, MITOCHONDRIAL  ali model follow..  16  2......................IPEFSSFVVRTNTCGELRSSH--------LGQEVTLCGWIQYRRQNT----FLVLRDFDGLVQVIIPQDESA--ASVKKILCEAPVESVVQVSGTVPKMPTGEIEIKVKTAELLNACKKPFEIKNFVKKTEALRLQYRYLDLR-SFQMQYNLRLRSQMVMKMREYLCNLGFVDIETPTL-FKRTPGGAKEFLVPSREPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGLLQYSWPNMTFAEVLATYGTDKPDTRFGMKIIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWNSPVANFIMESQRLELIRLMETQE--ADLLETRGVVLRDPTLFSFLWVVDFPLFLPKENPRELESAHHPFTAPHPSDTEPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATL-------LKEDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSKPTDSKAERAHV........................................................................................................................................................................... 607
15 -120.0004o2d_A mol:protein length:620 Aspartate--tRNA ligase  ali model follow..  18  2.............AMGTLEAQTQGPGSM-VLRTHAAGSLRP--------ADAGQTVTLAGWVARRRDHGG-VIFIDLRDASGVSQVVFREGDVLAAHRLRAEFCVAVTGVVEVRGNENPEIPTGQIEVNATELTVLGESA-PLPFQLDEQAGEEARLKYRYLDLR-REGPGNALRLRSKVNAAARSVLAEHDFVEIETPTLT-RSTPEGARDFLVPARLQPGSFYLPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVEADDVIAISEQVLKAVWATISYEEAMRRFGSDKPDLRFGIELVECTEYFKDTTFRVFQAPYVGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVLVGEDGGGPVAKNLSDAERDGLVAHVGANPGDCIFFAAGPAKGARALKRLDLIDPNAWAFTWVVDFPMFDVAVGSGAWTAMHHAFTAPKPDSSDPGNALSDAYDIVCNGNEIGGGSIRIHRRDIQERVFAMMGI----DHDEAQEKFGFLLDAFSYGAPPHGGIAFGWDRITALLAGVDSIREVIAFPKSGGGVDPLTDAPAPITPQQRKESGIDAKPREDKPKEDAKSKA......................................................................................................................................................................... 614
16 -118.0004rmf_A mol:protein length:609 Aspartate--tRNA(Asp/Asn) ligase  ali model follow..  18  1.............................MLRTHAAGSLRP--------ADAGQTVTLAGWVARRRDHGG-VIFIDLRDASGVSQVVFREGDVAAAHRLRAEFCVAVTGVVRPEGNENPEIPTGQIEVNATELTVLGESA-PLPFQLDEQAGEEARLKYRYLDLR-REGPGNALRLRSKVNAAARSVLAEHDFVEIETPTLT-RSTPEGARDFLVPARLQPGSFYLPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVEADDVIAISEQVLKAVWATISYEEAMRRFGSDKPDLRFGIELVECTEYFKDTTFRVFQAPYVGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVLVGEDGGGPVAKNLSDAERDGLVAHVGANPGDCIFFAAGPAKGARALLGATRIEIAKRLDLADEATAAGDVAVGSGAWTAMHHAFTAPKPDSSDPGNALSDAYDIVCNGNEIGGGSIRIHRRDIQERVFAMMGI----DHDEAQEKFGFLLDAFSYGAPPHGGIAFGWDRITALLAGVDSIREVIAFPKSGGGVDPLTDAPAPITPQQRKESGIDAKPREDKPKEDAKSKAAAA...................................................................................................................................................................... 601
17 -118.0005w25_A mol:protein length:616 Aspartate--tRNA(Asp/Asn) ligase  ali model follow..  19  2................GSSSSGLVPRGSHVLRSHAAGLLRE--------GDAGQQVTLAGWVARRRDHGG-VIFIDLRDASGIAQVVFRDPQDTEVHRLRAEFCVSVAGVVEIRPEGNPEIATGEIEVNATSLTVLGECA-PLPFQLDEPAGEELRLKYRYLDLR-RDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTI-TRSTPEGARDFLVPARLHPGSFYLPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDAEDIIAISEEVLTELWALIGYAEAMRRFGTDKPDLRFGLELVECTDFFSDTTFRVFQAPYVGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVLVAEDLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIANRLLIDPDAWAFVWVVDPPLFEPAVGSGAWTAVHHAFTAPKPEWSDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGL----DKAEAEEKFGFLLEAFMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESGIDAQPKRVQQA................................................................................................................................................................................ 610
18 -118.0004wj3_M mol:protein length:599 Aspartate--tRNA(Asp/Asn) ligase  ali model follow..  17  2............................GMMRSHYCGQLNE--------SLDGQEVTLCGWVHRRRDHGG-VIFLDVRDREGLAQVVFDPDRAETFAKADR----VRSEFVVKITGKVPNMASGSIEVLGYELEVLNQATPPFPLDEYSDVGEETRLRYRFIDLR-RPEMAAKLKLRARITSSIRRYLDDNGFLDVETPIL-GRPTPEGARDYLVPSRTYPGHFFLPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLDESDIIGITEKMVRQLFKEMPFEEAMRRYGSDKPDLRIPLELVDVADQLKEVEFKVFSGPANDPKGRVAALRVPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVNERAKGVEGLQSPIVDIVFFGADKAKIVCDALGALRIKVGHDLKLLTREWAPMWVVDFPMFEENDDGALHHPFTSPKCTPAELEANPGAALSRAYDMVLNGTELGGGSIRIHDKSMQQAVFRVLGI----DEAEQEEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGASSIREVIAFPKTQSAGDVMTQAPGSVDGKALRELHIRLREQPKAE................................................................................................................................................................................. 593
19 -117.0001eqr_A mol:protein length:590 ASPARTYL-TRNA SYNTHETASE  ali model follow..  18  2...............................RTEYCGQLRL--------SHVGQQVTLCGWVNRRRDLGS-LIFIDMRDREGIVQVFFDPDRADALKLASE----LRNEFCIQVTGTVRDMATGEIEVLASSLTIINRA-DVLPLDSNHVNTEEARLKYRYLDLR-RPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLT-KATPEGARDYLVPSRVHKGKFYLPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVADMIFFGADNKKIVADAMGALRLKVGKDLLTDESKWAPLWVIDFPMFEDDGEG-GLTAMHHPFTSPKDMTAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGI----NEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAENN................................................................................................................................................................................. 590
20 -91.4004j15_A mol:protein length:521 Aspartate--tRNA ligase, cytoplasmic  ali model follow..  17  15.MPSASASRKSQEKPREIMDAAEDYAKERYGISSMIQSQEKPDRVLVRIQKADEVVWVRARVHTSRAKGK-QCFLVLRQQQFNVQALVAVGDHAS-KQMVKFAANINKESIVDVEGVVRKVNQQDVELHVQKIYVISLAEPRLPEEGRATVNQDTRLDNRVIDLR-TSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSY--FKNNAYLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTRHLTEFVGLDIEMAFNYYHEVMEEIADTMVQIFKGLQE------------RFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGVEMGDEDD----------------------------LSTPNEKLLGHLVK-----------------------------------------EKYDTDFYILDKYPLAVRPYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEK--------IKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKR............................................................................................................................................................................................................... 512
21 -88.0001asy_A mol:protein length:490 ASPARTYL-tRNA SYNTHETASE  ali model follow..  17  6..................DNYGKLPLIQSRDSDRTGQK-RVKFVDLDEAKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTSKNMVKWAGSLNLESIVLVRGIVKKVDEPNLEIHITKIYTISETPEALPAAGLPVVNLDTRLDYRVIDLR-TVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAPSEGGSSVFEVTY--FKGKAYLAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHHMTEFTGLDMEMAFEEYHEVLDTLSELFVFIFSELPKRRKQYPVEEFKLPKDGKMVRLTYKEGIE----------------------------------------------MLRAAGKEIGDFEDLSTENEKFLGKLVR-----------------------------------------DKYDTDFYILDKFPLEIRPYTMPDPANPKYSNSYDFFMRGEEILSGAQRIHDHALLQERMKAH------GLSPEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRDPKR............................................................................................................................................................................................................... 487
22 -85.6003i7f_A mol:protein length:548 Aspartyl-tRNA synthetase  ali model follow..  15  13.PQLPPVVLLKTPELVSGENFKVMPMHQSQPCYKTGLKYTE---EELVPAMAEKTVTIRARVQAVRGKGN-MVFLFLRKGIYTCQALVMKSETISKEKISAESICDITGIVKAVEKPIEKATQQDVEIHVTSIAVVSLAEYPLPAQKYVKVSQDTRLDNRMLDLR-TVTNIAIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSSEGGSNIFEVKY--FDRKAYLAQSPQLYKQMAIMGDFRKVFEVGPVFRAENSNTRHLTEFEGLDIEMEIVNYHECIDVMEKLFTFIFDEIPKRKVIRKQYPFEDLIYRPFLRLTYKEAIE----------------------------------------------MLRASGETIGDYDDFTTPQEVKLGELIK-----------------------------------------AKYNTDFYILDKFPAAIRPFTMPDIDDPNYSNSYDVFVRGQEITSGAQRIHDPEFLMKRCIEKGVDPAT--------LKDYIESFRFGSWPHAGCGIGLERITMLYLGIPNIRKVTLFPRDPIR............................................................................................................................................................................................................... 545
23 -83.9003a5y_A mol:protein length:345 Putative lysyl-tRNA synthetase  ali model follow..  25  1...................................................................................................................................................MGSSSSGLVPRGSHMSETASSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSATVTDIHLVPFETRGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCP------------------AAESLSYQQAFLRYLEIDPLSADKTQLREVAAKL---------------------------DLSNVADTEEDRDTLLQLLFTFGVEP----------------------------------------NIGKEKPTFVYHFPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA................................................................................................................................................................................................................ 339
24 -83.3005xix_A mol:protein length:472 Asparagine--tRNA ligase, cytoplasmic  ali model follow..  15  3....SSSSGLVPRGSHMAKKITIKNDPSLPEPKCVKIG--------ALEGYRGQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYN-----GVLLSTESSVAVYGMLNLTPKGKHELSCDFWELIGLAPAGGADNINEESDVDVQLNNRHMMIR-GENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDY--FGEEAFLTQSSQLYLE-TCLPALGDVFCIAQSYRAEQSRTRHLAEYTHVEAECPFLTFDDLLNRLEDLVCDVVDRILKSSIVHELNPNFQPPKRPFKRMNYSDAIVWLKEHDVKK--------------------------------------------EDGTFYEFGEDIPEAPERLMTDTINEPILLCR------------------------------------------FPVEIKSYMQRCPEDSRLTESVDVLMNVGEIVGGSMRIFDSEEILAGYKREGIDPTP--------YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQR............................................................................................................................................................................................................... 463
25 -82.6003m4p_A mol:protein length:456 Asparaginyl-tRNA synthetase, putative  ali model follow..  16  2.............PGSMMTEATTTPVETPIVCNIR-----------DAAGLEGKLVTFKGWAYHIRKARKTLIFVELRDGSGYCQCVIFGKELCEPEKVKL----LTRECSLEITGRLNAYAILNLEMQVTEWKVIGESPIDLENIINKDSSIPQKMQNRHIVIR-SEHTQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGGSTLFKLQY--FNEPAYLTQSSQLYLE-SVIASLGKSFCMLSSYRAEQSRTVHLAEYLHLEAELPFISFEDLLNHLEDLVCTVIDNVMAVDKIRKMNPHLKLPTRPFKRMTYADAIK---------------------------------------------YCNDHGILNKDKPFEYGEDISEKPERQMTDEIGCPIFMIH------------------------------------------FPSKMKAFMSKVPGHPDLTESVDLLMPGVEIVGGSMRIWNYDELMGAYKANGLNPDP--------YYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPRYLER............................................................................................................................................................................................................... 453
26 -81.5001b8a_A mol:protein length:438 PROTEIN (ASPARTYL-TRNA SYNTHETASE)  ali model follow..  21  1.............................MYRTHYSSEITEEL--------NGQKVKVAGWVWEVKDLGG-IKFLWIRDRDGIVQITAPKKKVD--PELFKLIPKLRSEDVVAVEGVVNFTPKAKFEILPEKIVVLNRAETPLPLDPTGKVELDTRLNNRFMDLR-RPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGTELFPMKY--FEEDAFLAESPQLYKEIMMASGLDRVYEIAPIFRAEEHNTTHLNEAWSIDSEMAFIDEEEVMSFLERLVAHAINYVREHKELDILNFELEEPKLPFPRVSYDKALEILGDLGKEIPWGED---------------------------------------------IDTEGERLLGKYMMENENAPLYFLYQ------------------------------------------YPSEAKPFIMKYDNKPEICRAFDLEYRGVEISSGGQREHRHDILVEQIKEKGLNPES--------FEFYLKAFRYGMPPHGGFGLGAERLIKQMLDLPNIREVILFPRDRRR............................................................................................................................................................................................................... 435
27 -78.5003g1z_A mol:protein length:326 Putative lysyl-tRNA synthetase  ali model follow..  26  10......................................................................................................................................................................PSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSATVTDIHLFPFETRGHSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCQ------------------PAESLSYQQAFQRHLEIDPLSADKTQLREAAAKL---------------------------DLSNIADTEEDRDTLLQLLFTMGVEP----------------------------------------HIGKEKPTFIYHFPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA................................................................................................................................................................................................................ 326
28 -78.3002xti_A mol:protein length:437 ASPARAGINYL-TRNA SYNTHETASE, CYTOPLASMIC, PUTATIVE  ali model follow..  17  10.................................................KHRNERVCIKGWIHRMRRQGKSLMFFILRDGTGFLQVLLMDKLCQTYD-----ALTVNTECTVEIYGAIKEVPEGKHELIADFWKIIGNAPPGIDNVLNEEASVDKMLDNRHLVIR-GENAAALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGGSTLFNLDY--FGEQSFLTQSSQLYLETC-IPTLGDVFCIAQSYRAEKSRTRHLAEYAHVEAECPFITLDDLMEKIEELVCDTVDRLLADEEAKHINPKFQPPERPFLRMEYKDAIKWLQEHNVE--------------------------------------------NEFGNTFTYGEDIAEAAERFMTDTINKPILLNR------------------------------------------FPSEIKAFMQRDAKDNTLTESVDLLMPGVEIVGGSMRIWKFDELSKAFKNVEIDPKP--------YYWYLDQRLYGTCPHGGYGLGLERFICWLTNTNHIRDVCLYPRFVGR............................................................................................................................................................................................................... 434
29 -77.6001wyd_A mol:protein length:429 hypothetical aspartyl-tRNA synthetase  ali model follow..  22  1.............................MYRSHFIADVTPEY--------DGKEVIWAGWVHLLRDLGG-KKFIILRDKTGLGQVVVDKN-----SSAFGISQELTQESVIQVRGIVKADKRAPIELHAEEITLLSKAKAPLPLDVSGKVKADTRLRERVLDLR-RQEMQAVIKIQSLALKAFRETLYKEGFIEIFTPKIIASATEGGAQLFPVIY--FGKEAFLAQSPQLYKE-LMAGVVERVFEVAPAWRAEESDTPHLAEFISMDVEMAFADYNDVMQLLEKILHNIVKTIKEEEELKILNYEPPEVKIPIKRLKYTEAIEILRSKGYNIKFGDD-------------------------------------------------IGTPELRILNEELKEDLYFIVD------------------------------------------WPSDARPFTKSKSENPELSESFDLIYKFLEIVSGSTRNHKREVLEEALKKKGLKPES--------FEFFLKWFDYGMPPHAGFGMGLARLMVMLTGIQSVKEIVPFPRDKKR............................................................................................................................................................................................................... 426
30 -74.8001x54_A mol:protein length:434 Asparaginyl-tRNA synthetase  ali model follow..  18  1.............................MIEKVYCQEVKPEL--------DGKKVRLAGWVYTNMRVGK-KIFLWIRDSTGIVQAVVAKNVVG--EETFEKAKKLGRESSVIVEGIVKADEPGGAEVHVEKLEVIQAVSEFPIPENPEQASPELLLDYRHLHIR-TPKASAIMKVKETLIMAAREWLLKDGWHEVFPPIL--VTGAVEGGATLFKLKYFDKYAYLSQSAQLYLE-AAIFGLEKVWSLTPSFRAEKSRTRHLTEFWHLELEAAWMDLWDIMKVEEELVSYMVQRTLELEMFRDDLTTLKNTEPPFPRISYDEAID---------------------------------------------------LQSKGVNVEWGDDLGADEERVLTEEFDRPFFVYG------------------------------------------YPKHIKAFMKEDPNDPRKVLASDML-----APEGYGEIIGGSQREDDYDKLLNRILEEGMDPKD-YEWYLDLRRYGSVPHSGFGLGVERLVAWVLKLDHIRWAALFPRTPAR............................................................................................................................................................................................................... 431
31 -74.8001n9w_A mol:protein length:422 aspartyl-tRNA synthetase 2  ali model follow..  19  9................................................KAHVGQEVELLGFLHWRRDLGR-IQFLLLRDRSGVVQVVTGGLK------------LPLPESALRVRGLVVENAKGGLEVQAKEVEVLSPALEPTPPKEEWRANPDTLLEYRYVTLR-GEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKV--VRAGAEGGSGLFGVDYFEKRAYLAQSPQLYKQ-IMVGVFERVYEVAPVWRMEHHTSRHLNEYLSLDVEMGFIDEEDLMRLEEALLAEMLEEALNTDEIRLLGATWPSFPQDIPRLTHAEAKR----------------------------------------------ILKEELGYPVGQDLSEEAERLLGEYAKERWGSDWLFVTR------------------------------------------YPRSVRPFYT-YPEEDGTTRSFDLLFRGLEITSGGQRIHRYEELLESLKAKGMDPEA--------FHGYLEVFKYGMPPHGGFAIGAERLTQKLLGLPNVRYARAFPRDRHR............................................................................................................................................................................................................... 419
32 -48.4003p8t_A mol:protein length:294 AsnS-like asparaginyl-tRNA synthetase related protein  ali model follow..  16  2...............................................................................................................................................................NAVEII-SRDIYKAIDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPAGEGIRPAEVDVYGVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDHSYEFTQLDFEIEGAKMKDVMRLIEELIYGLFRKA------EEWTGREFPRARHFKVYDYKDILEEFGS-----------------------------------------------------------------DEKASMEMEEPFWIVNIPRE---------------------------------------------FYDREENGVWKNYDLILPYGYGEVSSGGEREWEYEKIVAKIRAAGLKEDS--------FRPYLEIARAGLKPSAGAGIGVERLVRFIVGAKHIAEVQPFPRVPGIPAVI........................................................................................................................................................................................................... 294
33 -46.4002zni_A mol:protein length:308 Pyrrolysyl-tRNA synthetase  ali model follow..  14  4....................................................................................................SSSGLVPRGSHMFLTRRDQYQRLKELNASGEQLEMGFSDALSRDRAFQGIEHQLMSQGKRHLEQLRTVKHRPAL---LELEEKLAKALHQQGFVQVVTPTIITKMTIGEDHPLFSQVFWLDGKKCLRLAPNLYTLWRLWDKPIRIFEIGTCYRKESQGAQHLNEFTMLNLTELGTPLEERHQRLEDMARWVLEAAGIREFELVTEGDTVDVMKGDLELASGAMGPHFLDEKWEIFDPWVGL-----------------------------------------GFGLERLLMIREGTQHVQSMARSLSYLDGVRLNIN.................................................................................................................................................................................................................................................................................................................................................................. 302
34 -45.2001nnh_A mol:protein length:294 asparaginyl-tRNA synthetase-related peptide  ali model follow..  15  2...............................................................................................................................................................NAVEII-SREISPTLDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPAGEGMEPAEVEIYGVKMRLTHSMILHKQLAIAMGLKKIFVLSPNIRLESRQKDHAYEFTQLDFEVERAKMEDIMRLIERLVYGLFRKA------EEWTGREFPKTKRFEVFEYSEVLEEFGS-----------------------------------------------------------------DEKASQEMEEPFWIINIPR---------------------------------------------EFYDREVDGFWRNYDLILPYGYGEVASGGEREWEYEKIVAKIRKAGLNEDS--------FRPYLEIAKAGLKPSAGAGIGVERLVRFIVGAKHIAEVQPFPRIPGIPAVI........................................................................................................................................................................................................... 294
35 -40.1004lns_A mol:protein length:351 Asparagine synthetase a  ali model follow..  11  4..............................................................................................................................................................DGYSSYV--LLQEQILTVKRSFSEALEKEL---NLVEVRAPILFRVGDGTQDNLSGFEKAIPNASFEVVHSLAKWKRRTLFAPGHGLYTHMTALRDDVLDNIHSVVVDQWDWEMVMKDDQRNLAFLKEVVCKVYAAIRKTELAVCE-KQKPILPETIQFVHAEHLLLA-----YPNLTAKEREREIAREYGAVFLIGIGA------------------------------------------------------------------VLSSGDRHDARAPDYDDWTSPVEASQVVFPRTSKPIPTMNSLSSLKGLNGDILLDSLEVSSMGIRVNAEALRHQISLTGDDSLLK--------SEWHQQLLNGEFPQTVGGGIGQSRMVMFMLRKKHIGEVQVWPE................................................................................................................................................................................................................... 342
36 -35.60011as_A mol:protein length:330 ASPARAGINE SYNTHETASE  ali model follow..  11  1.................................................................................................................................................................MKTAYIAKQRQISFVKSHFSRQLEERL---GLIEVQAPILSRVGDGTQDNLSGAEKAVPDAQFEVVHSLAKWKRQTLFSAGEGLYTHMKALREDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATAAVSEEFGLAPFLPDQIHFVHSQELLSR-----YPDLDAKGRERAIAKDLG-------------------------------------------------------AVFLVGIGGKLSDGHRHDVRAPD-------------------------YDDWSTPSELGHALNGDILVWNPVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLE--------LEWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQAWPAAVRE............................................................................................................................................................................................................... 324
37 -32.7002e3c_A mol:protein length:291 Pyrrolysyl-tRNA synthetase  ali model follow..  17  7.......................................................................................................GLVPRGSHMASAPALTKSQTDRLEVLLNPKDEISLNS---GKPFRELESELLSRRKKDLQQIYAEEREN---YLGKLEREITRFFVDRGFLEIKSPILIPLMGIDNDTELSKQIFRVDKNFCLRPMLAPNLYNYLLPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCENLESIITDFLNHLGIDFKIVGDSCMVYGDTLDVMHGDLELSSAVVGPIP............................................................................................................................................................................................................................................................................................................................................................................................................................................................ 237
38 -32.0004bw9_A mol:protein length:291 PYRROLYSINE--TRNA LIGASE  ali model follow..  19  2..................................................................................................GSSSSGLVPRGSHMASAPALTKSQTDRLEVLLNPKDEISLNS---GKPFRELESELLSRRKKDLQQIYAEEREN---YLGKLEREITRFFVDRGFLEIKSPILIPRMGIDNDTELSKQIFRVDKNFCLRPMLAPNLGNYLLPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGRENLESIITDFLNHL................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 201
39 -31.7004tqd_A mol:protein length:291 Pyrrolysine--tRNA ligase  ali model follow..  17  7.......................................................................................................GLVPRGSHMASAPALTKSQTDRLEVLLNPKDEISLNS---GKPFRELESELLSRRKKDLQQIYAEEREN---YLGKLEREITRFFVDRGFLEIKSPILIPLMGIDNDTELSKQIFRVDKNFCLRLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLSFIQMGSGRENLESIITDFLNHLGIDFKIVGDSCMVYGDTLDVMHGDLELSSAVVGPIP............................................................................................................................................................................................................................................................................................................................................................................................................................................................ 237
40 -26.5004r3z_A mol:protein length:312 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1  ali model follow..  25  103..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTVSSGTKEQIKGGTGDEKKAKEKIEKKGEKKEKKQQSIAGSADSKPIDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCA--SSPEKIEILAPPNGSVPGDRIFPGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVKGK--VCRAQTMSNSGIK 312
41 -24.6001e7z_A mol:protein length:174 ENDOTHELIAL-MONOCYTE ACTIVATING POLYPEPTIDE II  ali model follow..  28  1..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AKPIDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCA--SSPEKIEILAPPNGSVPGDRIFPGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVKGKG-VCRAQTMSNSGIK 166
42 -24.5003qtc_A mol:protein length:290 Pyrrolysyl-tRNA synthetase  ali model follow..  17  5........................................................................................................LVPRGSHGASAPALTKSQTDRLEVLLNPKDEISL------NSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKSPILIPRMGIDNDTELSKQIFRVDKNFCLRPMLTPNLYNYLRK---KIFEIGPCYRKESDGKEHLEEFTMLVFWQMGSGRENLESIITDFLNHL................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 198
43 -23.8001ntg_A mol:protein length:172 Tyrosyl-tRNA synthetase  ali model follow..  29  3...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................EEVIPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGNRQVEPLDPPAGSAPGEHVFKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTKL---SISCKSLKGGNI. 169
44 -23.5005k1p_A mol:protein length:274 Pyrrolysine--tRNA ligase  ali model follow..  19  14.....................................................................................................................................VLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKSPILIPRMGIDNDTELSKQIFRVDKNFCLRLAPNLYNLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLAFAQMGSGRENLESIITDFLNHL................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 184
45 -23.3004q6g_A mol:protein length:267 Pyrrolysine--tRNA ligase  ali model follow..  17  13.....................................................................................................................................VLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKSPILIPRMGIDNDTELSKQIFRVDKNFCLRPMVAPNIFNYARKLDRKIFEIGPCYRKESDGKEHLEEFTMLNFFQMGSGRENLESIITDFLNHL................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 183
46 -23.0004r1j_A mol:protein length:197 GU4 nucleic-binding protein 1  ali model follow..  24  3.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SSSSGLVPRGSHMPEKPKPSAIDFRVGFIQKAIKHPDADSLYVSTIDVGDEEGRTVCSGLVKHFPLDAMQERYVVVVCNLKPVNMRGIKSTAMVLCG--SNDDKVEFVEPPKDSKAGDKVFPKKKIWEHLQPHFTTN--DGLEVIFKDEEEKDHPVRKLTNAKGERFKVASIANAQVR 191
47 -21.7004gla_C mol:protein length:109 OBody NL8  ali model follow..  16  2.......................SVYP---KKTHWTAEITP--------NLHGTEVVVAGWVASLGDYG-RVKIVKVSDREGGAAVPVYLEAGKTPDHLFKVFAELSREDVVVIKGIVEASKGRGVEIFPSEIWILNKA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 107
48 -20.4004gn5_A mol:protein length:113 OBody AM3L15  ali model follow..  11  3.............................PKKTHWTAEITP--------NLHGSEVVVAGWVAHLGDYG-RVKIVKVSDREGGAAVPVYLERGKTPDHLFKVFAELSREDVVVIKGIVEAGWDTGVEIFPSEIWILNKAKPLPID.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 113
49 -20.1004glv_B mol:protein length:107 OBody AM3L09  ali model follow..  13  3.............................PKKTHWTAEITP--------NLHGSEVVVAGWVAHLGDYG-RVKIVKVSDREGGAAVPVYLERGKTPDHLFKVFAELSREDVVVIKGIVEATTDTGVEIFPSEIWILNKA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 107
50 -20.1005gro_A mol:protein length:115 Aspartate--tRNA(Asp/Asn) ligase  ali model follow..  22  7...............................RSHFCTEISE--------KDVGKIVKVAGWCNTYRDHG-GVVFIDLRDKSGLVQLVCDPSSYEKALEVRSEFVLVAKGKVRLRGAGNPKLKTGKIEIVLEELIIENKS........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 109
51 -20.0004gn4_B mol:protein length:108 OBody AM2EP06  ali model follow..  12  5..............................KKTHWTAEITP--------NLHGSEVVVAGWVAHLGDYG-RVKIVKVSDREGGAAVPVYLERGKTPDHLFKVFAELSREDVVVIKGIVEASEATGVEIFPSEIWILNKA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 108
52 -19.3004cs2_A mol:protein length:274 PYRROLYSINE--TRNA LIGASE  ali model follow..  17  14.....................................................................................................................................VLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKSPILIERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLANYLRK---KIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGRENLESIITDFLNHL................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 184
53 -18.9003ers_X mol:protein length:118 tRNA-binding protein ygjH  ali model follow..  37  7.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ADFARLEMRVGKIVEVKRHENADKLYIVQVDVGQK-TLQTVTSLVPYYSEEELMGKTVVVLCNLQKAKMRGETSECMLLCAETDDGSESVLLTPERMMPAGVRVV......................................................... 110
54 -18.8005h34_A mol:protein length:135 Methionine-tRNA ligase  ali model follow..  34  1......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MGSSSSGLVPRGSHMEKAEEEYGLVSYLDFAKLDMRVGKIIDVQDHPNADKLYIIKVSLGNK-QKTLVGGLKQYYKKEELIGKYVVLINNLKPKQLRGITSEGMLLAA--DDGKEVALLMPDKPISLGSKV.......................................................... 128
55 -18.6004gn3_B mol:protein length:113 OBody AM1L10  ali model follow..  14  8..............................KKTHWTAEITP--------NLHGTEVVVAGWVASLGDYG-RVKIVKVSDREGGAAVSVYLEYGKTPDHLFKVFAELSREDVVVIKGIVEASKAAAVEIFPSEIWILNKA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 112
56 -18.4002cwp_A mol:protein length:112 MetRS related protein  ali model follow..  32  2.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NYMELYDVDEFWKFQMKVGLVKKAEKIKRTKKLIKLIVDFGNE-ERTIVTGIADQIPPEELEGKKFIFVVNLKPKKFSGVESQGMLILA-ETEDGKVYLIPVPEEVPVGARVW......................................................... 112
57 -18.2001rqg_A mol:protein length:722 Methionyl-tRNA synthetase  ali model follow..  16  37..........RLKGEDVVFICGTDEHGTPISFRASPREIVDEFHEQIKITFQRAKISFDFFGRTELPIHYKLSFLKAYENGHLVKKVTKQAYCEHDKMFLPDRFVIQKGDQCEVCGRPLT----PEILINPRCAICGRPISFRDSAHYYIK---QDFAERLKRWIEKQPWKPN--VKNMVLSWIEEGLEERAITRIPVPL----EEDMKGKVLYVWFEAP----YISITIEHFKRIGKPNEWKKYWLNIDGFIGKDNIPFHAPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKK------------------------FSTSRNWAIWVHEFLDVFPADYLRYYLTTIMPETRDSDFSFSDFKVRINEELVNNLGNFVHRALTFVNRYFDGVVPERGELDELDREALEEIEKAFKEVGELIMNYRFK-----DALKRVMSLASFGNRYFDHKQPWKTAKEDKVRTGTTVNISLQIVKALGILLEPFLPDASEKIWHLLNLDEVKRWEFRELPAGHKVRKPEILFKK-----VTDDQIIYFILNYMAKGNPEGARILLDKYYKREDVIRVAKEKFGDEAEVVLRRVYKDIKLKEKKEGKEMYVKFDDFAKLDLRVGKIIEVKDHPNADKLYVVKVDLGDEV-RTLVAGLKKYYKPEELLNRYVVVVANLEPKKLRGIGSQGMLLAA--DDGERVALLMPDKEVKLGAKV.......................................................... 721
58 -17.7001pyb_A mol:protein length:111 methionyl-tRNA synthetase beta subunit  ali model follow..  39  2.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................EEKALIGIEDFLKVDLRVAKVLSAERVEGSEKLLKLTLSLGDE-ERTVVAGIAKYYTPEELVGKKIVIVANLKPRKIFGIESQGMILAA--SDGENLSVIVPDRDVKEGAKL.......................................................... 110
59 -16.9001gd7_A mol:protein length:109 CSAA PROTEIN  ali model follow..  25  5.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................EAFQILDLRVGRVLRAEPHEKARKSYKLWVDLGPLGVKQSSAQITELYRPEDLVGRLVVCAVNLGAKRVAGFLSEVLVLGV-PDEAGRVVLLAPDREVPLGGKVF......................................................... 109
60 -16.5003g48_A mol:protein length:112 Chaperone CsaA  ali model follow..  23  1..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SNAMANFEDFLTLDLRIGTVTHAEEFKEAVPAIRLEIDFGELGMKQSSAQITKRYNPEDLIGQQIVAVVNFPPKRVAGFKSEVLVLGGVPEAGD-VVLLQPNMELPNGTKI.......................................................... 111
61 -16.3002q2h_A mol:protein length:131 Secretion chaperone, phage-display derived peptide  ali model follow..  21  2.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SHMVPGQKQHYVQPTAANSGEISYADFEKVDIRVGTIVEAVPFPEARKPAIKVKIDFGPEIKKSSAQITVHYTPESLVGRQVLGVVNFPPRQIGPFRSEVLTLGFADANGD-IVLAAVERPVPNGEKM.......................................................... 130
62 -15.0002q2i_A mol:protein length:116 Secretion chaperone  ali model follow..  25  1.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GSHMSGEISYADFEKVDIRVGTIVEAVPFPEARKAIKVKIDFGPEGIKKSSAQITVHYTPESLVGRQVLGVVNFPPRQIGPFRSEVLTLGFADANGD-IVLAAVERPVPNGEKM.......................................................... 115
63 -14.8002nzh_A mol:protein length:113 Protein csaA  ali model follow..  27  1..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GSHMAVIDDFEKLDIRTGTIVKAEEFPEARVAIKLVIDFGTEIGKQSSAQITKRYKPEGLINKQVIAVVNFPPRRIAGFKSEVLVLGG-IPGQGDVVLLQPDQPVPNGTKI.......................................................... 112
64 -10.6005x6c_A mol:protein length:553 O-phosphoserine--tRNA(Cys) ligase  ali model follow..  11  99...............................................................................................................................................PEAMAVLDRCFYLAGLPRPDVGLGNEKVEIIKNLGIDIDEEKKERLREVLHLYKKGAIDGVSNEMGLKVLFKDLKPESTTLTLRSHMTSGWFITLSSLIKKLFSIDRCFRREQEDRSHLMSYHSAS---VVVGEDVSVDDGKVVAEGLLAQFGFTKFKFKPDE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKSKYYTPETQTEVYAYHPKLGE------------WIEVATFGVPPVMNLGLGVERLAMIIYGYEDVRAMV---------------------------YPQFYEYRLSDRDIAGMIRVDKVPILDEFYNFANELIDICIANKDKESPCSVEVKREFFNGERRVIKVEIFENEPNKKLLGPSVLNEVYVYDGNIYGIPPT---FEGVKEQYIPILKKAKEEGVSTNIRYI--DGIIYKLVAKIEEALVNVDEFKFRVPIVRSSDINLKIDELALKQIMGE-VRGPV. 544
65 -9.8302du3_A mol:protein length:534 O-phosphoseryl-tRNA synthetase  ali model follow..  13  118.............................................................................................................................................................................ITKREVDSKPLQEIFHRYKKGEIDGDDLSYLIAEVLDVDDITAVKILDEVFPLRSHMTTGWFITLSHIADKLFSIDRCFREQGEDATRLYTYFSAS---VLVDEELSVDDGKAVAEALLRQFGFENFRFRKDE-------------------------------------------------------------------------------------------------------------------------------------------------KRSKYYIPDTQ-----------TEVFAFHPKLVGSSTKYS---------------------------DGWIEIATFGIPPVMNLGLGVERLAMILYGYDDVRKMV----------------------------YPQIHGEIKLSDLDIAREIKVKEVPQTAVGLKIAQSIVETAEKHASEPSPCSFLAFEGEMMGRNVRVYVVEEEENTKLCGPAYANEVVVYKGDIYGIPKTKKWRSFFEEGPTGIRYI---------------DGFAYYAARKVEEAAMEQEEVKVKARIVENSDINLYIHENVRRYILWK-VRGPL. 525
66 -9.5001b70_A mol:protein length:350 PHENYLALANYL-TRNA SYNTHETASE  ali model follow..  12  4....................................................................................EALAAIQNARDLEELKALKALGKKGLLTQEMKGLSALPLEERRKRGQELNAIKAALEAAKALEEAALKEALERERVDVSLPGASLFSGGLHPITLMERELVEIFRALGYQAVEGPEVESEFFNFDA-PEHHPARDMWDTFWLT-GEEVEGRLLL-----RIVVPGRVFRFEQTDATHEAVFHQLE---LVVGEGIAMAHLKGAIYELAQALFGPDSKVRFQPVYFPFVEPGAQFAV................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 269
67 -9.1702j3l_A mol:protein length:572 PROLYL-TRNA SYNTHETASE  ali model follow..  10  5.....................................................................................................................................KMLIPTLREVPNDAE-VLSHQILLRAGYIRQVAA------NRVLEKLKTIMREEFEKIDAVEMLMPALLPAE-ETYGPNLYRLKDRNDRDYILGPTHEETFTELIRDEINNLYQIQTKYRDEGL---RGREFIMKDGYSFHADEASLDQSYRDYYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDT-----------------ICYSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEVANFFEVEPQRIIKSVLFIADEEPVMVLVRGDHDVNDVKLKNFLGADFLDEATEEDARRVLGAGFGSIGPVNVSEDADLAVQDLANAIVGANEDGYHLTNVNPDRDFQPISYEDLRFVQEGDTKGIEIGHIFKLGTRYSDA-MGCYGIGVSRLLSAIVEQNADERGINWPTG-----------------------------------------------------------------------DLHVVQMNVKDEYQTKLSQEVEAMMT------------------------------------EAGYEVLVDDRNERAGVK-FADADLIGCPIR-----TVGK---KAVDGVVKRTGEMLEVRKEELESTLSILMN.... 566
68 -9.1002rhq_A mol:protein length:294 Phenylalanyl-tRNA synthetase alpha chain  ali model follow..  13  20.....................................................................................................................................................MEKLNQQLAEETIDVTLPSRQISIGSKHTRTVEEIEDLFLGLGYEIVDGYEVEQDYYNFEA-PKSHPARDMQDSFYITDEILMTMEKRNGQGPVKIICPGKVYRRDSDDATHSHQFTQIE---LVVDKNIKMSDLKGTLELVAKKLFGADREIRLRPSYFPFTEP......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 196

FFAS is supported by the NIH grant R01-GM087218-01
1 2 7 4 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sasin JM, Godzik A, Bujnicki JM. SURF'S UP! - protein classification by surface comparisons. J Biosci. 2007 Jan;32(1):97-100.