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Query: 4gn3_B mol:protein length:113 OBody AM1L10, from PDB1018

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst AMGSVYPKKTHWTAEITPNLHGTEVVVAGWVASLGDYGRVKIVKVSDREGGAAVSVYLEYGKTPDHLFKVFAELSREDVVVIKGIVEASKAAADMHNGVEIFPSEIWILNKAKLast
1 -11.900PF04076.13; YGIW_ECOLI/25-127; Bacterial OB fold (BOF) protein  ali follow..  20  24...........TVESAKSLRDDTWVTLRGNIVERISDDLYVF---KDASGTINVDIDHKRWN---------VTVTPKDTVEIQGEV------DKDWNSVEIDVKQIR...... 102
2 -11.400PF08661.11; Q7Q0T3_ANOGA/1-114; Replication factor A protein 3  ali follow..  13  12.............GALMKRHVGQPISIHLKVERADDGCKSFSGKSTDG-VNVQVQLSDPLNGVCSGWVEVIGIAAPNDTVRGKEIITFNSGEKTESFDVDGHNMLCTLMSVCK 111
3 -11.200PF16100.5; I3IYQ1_ORENI/15-142; RecQ-mediated genome instability protein 2  ali follow..  19  38......................SLVWMQGTVLEVQQDRDTVLLM--DETGTFVVQGVNNIP-------KGKPCLSQGKYVMVMGIIQAVSPEP------VIRAVKMADLSELA 113
4 -10.500PF10451.9; Q6FM89_CANGA/3-245; Telomere regulation protein Stn1  ali follow..  10  55......................RRLKFVGTVYMWLKGDDYAVIHLDDSSDSSILKCKCEVNQLNSFGIN-INAGFIGSRVEVCGVYNTEFN--------ELEVGFIGVLPST. 139
5 -9.090PF02760.15; I3N161_ICTTR/202-369; HIN-200/IF120x domain  ali follow..  12  98.......NETPKIDHLHKQAPGTLVYGLFMLHTKKVNKKNTIYEIQDNTGKIEVLGSGKWHNIQCDEGNKLR......................................... 162
6 -8.880PF12658.7; B8LUN8_TALSN/1-139; Telomere capping, CST complex subunit  ali follow..  10  1.MNGPIPTRLVFLHELSSLPPHTKVRFLGCVTRYDTVRGRLELEHNFPPLSRKDKKRSSSIASRRVSVDIGGQLQVGTWLNIFGYIRLEMQSKKDE................. 103
7 -7.970PF11736.8; K0CF90_ALCDB/25-167; Protein of unknown function (DUF3299 topsan)  ali follow..  46.............APLQQSLDDKDIRLTGFGVPLEGDADHVFLLVPYFGACIHAPPPPRNQIILVRASGKGVPLDIMGALQVTGTLKVTPEETEYQAGYSMKASDVK...... 143
8 -7.590PF17185.4; C1AED6_GEMAT/149-241; NlpE C-terminal OB domain  ali follow..  1....................ISESAVYVGSFVYWADAP--TLRECNSGK-TIPVMMKGDYKVLEKAYTAAKLPAGSGQQVEVQARLVPRPADMEGTEPFVFEVSKYIGPSING 90
9 -7.550PF17244.2; A0A078HC14_BRANA/408-638; Cell division control protein 24, OB domain 3  ali follow..  14  1..............DCRDKTTG--ISLYGVVTDILCDPNVFSLKIEDTTGAIWARL--------FNSYWSLGRLGLGHVVYVSGLSCKTTKENCL.................. 76
10 -7.550PF17008.5; H8ZDW6_NEMS1/218-415; Domain of unknown function (DUF5088 topsan)  ali follow..  19  13...............................SSGGSLPLFFSFILLTSAGLVKVYV--------KLAVRKFFCIKEGDYIFIRG............................. 58

FFAS is supported by the NIH grant R01-GM087218-01
1 2 8 4 9 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Bossy-Wetzel E, Barsoum MJ, Godzik A., Schwarzenbacher R, Lipton SA. Mitochondrial fission in apoptosis, neurodegeneration and aging. Curr Opin Cell Biol. 2003 Dec;15(6):706-16. Review.