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Query: 1v7o_A mol:protein length:165 alanyl-tRNA synthetase, from PDB1018

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MYSIEVRTHSALHVVKGAVVKVLGSEAKWTYSTYVKGNKGVLIVKFDRKPSDEEIREIERLANEKVKENAPIKIYELPREEAEKMFGEDMYDLFPVPEDVRILKVVVIEDWNVNACNKEHTKTTGEIGPIKIRKVRFRKSKGLLEIHFELLELENPSLELast
1 -97.800d1v4pa_ d.67.1.2 (A:) Hypothetical protein PH0574 {Pyrococcus horikoshii [TaxId: 53953]}  ali model 3D-neighbors follow..  100  1MYSIEVRTHSALHVVKGAVVKVLGSEAKWTYSTYVKGNKGVLIVKFDRKPSDEEIREIERLANEKVKENAPIKIYELPREEAEKMFGEDMYDLFPVPEDVRILKVVVIEDWNVNACNKEHTKTTGEIGPIKIRKVRFRKSKGLLEIHFEL......... 150
2 -59.200d2e1ba2 d.67.1.2 (A:88-216) AlaX-M trans-editing enzyme, C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}  ali model 3D-neighbors follow..  24  5.RYKLMRIHTGLHLLEHVLNEVLGEGNWQLVGSGMSVEKGRYDIAYPENLNKYK-EQIISLFNKYVDEGGEVKIW-----------------------WEGDRRYTQIRDFEVIPCGGTHVKDIKEIGHIKKLKRS-SIGRGKQRLEMWL......... 128
3 -39.400d1tkea2 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrRS), second `additional` domain {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  16  8.....IIRHSCAHLLGHAIKQLWPHTKMAIGPVI--DNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKENIAHDDKPGLYFHEEY-VDMCRGPHVPNMRFCHHFKLMKTAGSNNKMLQRIYGTA......... 160
4 -9.220d1zh5a2 d.58.7.1 (A:104-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  21  8.......................................................................................................RSVYIKGFPTDA---EWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE 66
5 -6.580d3uf2a_ a.26.1.2 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  10  7...............................................HMIGSGHLQSLQRLIDSQMETSCQITFEFVDQEQLKD........................................................................... 43
6 -6.380d2fc9a1 d.58.7.0 (A:8-95) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  23  9.......................................................................................................KTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALN 64
7 -6.090d3md3a1 d.58.7.0 (A:75-159) automated matches {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  16  1.......................................................................................................RVLYVGNLDKAI---QYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQ 59
8 -5.720d4k60a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  12  42.........TAAHCAGRSITVTLGAHEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLK--LKEKASLTLAVGTLPFPSQKNFVPPGRMCRRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFDHNLQ................................ 165
9 -5.670d2krra1 d.58.7.1 (A:1-85) Nucleolin {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  26......................................................................................................................TGISDVFAKNDLAVVDVRIGMTRKFGYVDFESAEDLEKALE 66
10 -5.650d2aiqa_ b.47.1.2 (A:) automated matches {Agkistrodon contortrix [TaxId: 8713]}  ali model 3D-neighbors follow..  14  37.........TARHCDRGNMRIYLGMHLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIR--LNRPVRNSAHIAPLSLPSNPPSVGSVCRIMGWGTITSPNDVPHCANINILDYAVCQAAYKGLAATT................................ 160

FFAS is supported by the NIH grant R01-GM087218-01
1 3 3 2 3 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Slabinski L, Jaroszewski L, Rychlewski L, Wilson IA, Lesley SA, Godzik A. XtalPred: a web server for prediction of protein crystallizability. Bioinformatics. 2007 Dec 15;23(24):3403-5. Epub 2007 Oct 5.