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Query: PF13532.6; D0N998_PHYIT/73-283; 2OG-Fe(II) oxygenase superfamily, from PfamA32U

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GLLIIKQFLTPQEQQELVDDSRCMGLGEGGFYKPTYASGAKCRLHQMCLGRHWNVKTEKYEDQRSNYDYAPIRTLPDSWKTYAQRSLDAAKKIDPLVMGSCKKMTPDICVVNFYKKAGRNGMHIDKDESDEAMSMGSPVISFSVGCAAEFAYIDHYPDPHEAVPIVRLESGDALVFGGPARTVVHALTRVYNNTQPSWLRMRSGRLNLTFRLast
1 -71.500[A] KOG2731 DNA alkylation damage repair protein  ali follow..  37  232GMVLLKDFLTPDIQVDIVKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQTKYRKNTD---IDSKAPEIPVTFNVLVEKAIREAHSGTEDAERILPVMSPDICIVNFYSETGRLGLHQDRDESEESIARGLPIVSFSIGDSAEFLYGEKRDVE--EAQGVILESGDVLIFGGESRMIFHGVKSIIPNSAPMSLKLRTGRLNLTFR 447
2 -65.900[L] COG3145 Alkylated DNA repair protein  ali follow..  25  7GVRHMPAYLSRAIQDALVEDVRSIVQQAPLFVPAMPRTGKEMSVRMTNCGPLGWVTDKERGYRYQPTHPLTGEPWPPIPESLLDLWRQVSG----------YPNPPEACLINFYTADAKMGLHQDRDE----ADFSAPVVSVSLGDDCLFRVGQTTRDG--ATKSFRLKSGDVVVLGGEGRLAFHGVDRIYPSTSA--LLKNGGRINLTLR 199
3 -51.100[S] KOG4176 Uncharacterized conserved protein  ali follow..  21  136GLHIIADFVTEEEESTLLRAIGEDGRTSEVTGS-------LKHRNVKHFGFEFL-----YGTNNVDPSKPLEQSIPSACDILWPRLNSFASTW--------DWSSPDQLTVNEYEPGHGIPPHVDTHSA-----FLDPILSLSLQSDVVMDFRRG-----DDQVQVRLPRRSLLIMSGEARYDWHGIRPKHIDVVPSTTQARGKRTSLTFR 322
4 -18.500[S] COG3826 Uncharacterized protein conserved in bacteria  ali follow..  15  38GNALLPGLLTPGACDALAALYPRDSLYRSRVAMARHGFGRG--------------EYKYFAYPLPGLIEHLRTQLYPRLAPIANRWNQAMGIDVRLRRCHDAGQLRPTPLILQYGPGDYNCLHQDLYGEHVF----QVAILLS-GGE--FVMTEQRPRMQSRPDVVPLRKGDAAVFAVSQRTMRHGVSRLR----------SGQRHTVGI. 244
5 -16.700[S] COG3128 Uncharacterized iron-regulated protein  ali follow..  14  14.MYHIPGVLSPQDVARFREQLEQAEWVDGRVTTGAQGAQVKNNQQVDT---------------------------RSTLYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNNETYGFHVDRSHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGDLVLYPSSS---LHCVTPV----------TRGVRVASF.. 184
6 -15.600[B] KOG3844 Predicted component of NuA3 histone acetyltransferase complex  ali follow..  54NWGTIHELVNDDLLRAVRKEIET-------------------EIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSDMSINTYTKGCHLLTHDDVIG-SRRISFILYLPDPD-GGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVLPGFSFHDVEEVKVDK---------HRLSIQ.. 242
7 -13.300[O] COG3751 Predicted proline hydroxylase  ali follow..  37NHVVIRPLINDTLLRNVRKELME-------------------NIHFTEKVTDIYRVWQTGDLANLDGLDKKEQNMLKYLRQVRDALYSEEFRSHVQKITGCGPLSASKK-VNVYSKGCHLMNHDDVIG-TRCISYILYLVEPD-GALRLFPTLQPSFPAADFCHSIPPQWNQLSFFRVKPGHSFHDVEEVYVDK---------PRMAIS.. 225
8 -12.100[Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin  ali follow..  11  23GYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGELGVLRLM----------MKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPD---------VFQNAFHQDFPGYIASVNIMFAIDPFT-GATLVVPGSHQHTYLARNAVPVQCAAGSLFVFDSTL---WHAAGRNTSG---------KDRLAINH. 213
9 -10.800[I] KOG3290 Peroxisomal phytanoyl-CoA hydroxylase  ali follow..  65GFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMH---------------TMLINKPPDSGKKTSRHPLHQDSDLIVCAWTAMEHISRNNGCLVVLPGTHKGENKARVHLVMEKGDTVFFHP---LLIHGSGQNKTQG---------FRKAISCH 281
10 -8.830[S] KOG4459 Membrane-associated proteoglycan Leprecan  ali follow..  11  470QRVVMDGVISDHECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTV--------------FKALKLGQEGKVPLQSAHLYYNVTEKVRRIMESYFRLDTPLYFSIEEVQAERKDDSHPVHVDNCILNAETLV-SAILYLN-GGNFYF----TELDAKTVTAEVQPQCGRAVGFSSGTENP-HGVKAVTRGQ----------RCAIAL. 674

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.