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Query: PF16998.5; B9JAN2_AGRRK/36-151; 17 kDa outer membrane surface antigen, from PfamA32U

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .
# Score Template Links and tools%idFirst SGGMDILSSAKVDRSVATGTIPTAPVTADSVSDETTVRNAVTSADLHKLNGQPVPWANASTGSAGVIDTIVENSASGQVCRQFRTTRHSYQGIANFSGRTCLLGQGEWQLLSFQQALast
1 -41.600[M] COG4520 Surface antigen  ali follow..  21  18.FGRSAQPSTPFLANLQ-GGIVGKSGVELDRGDQTKALEAEYKALETAPVGTPVIWTGDDVK--GQVVANAPYQVGNQNCRQYSHTLTVDGRDTRVRGAACRNDDGSWSPL..... 124
2 -7.210[Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component  ali follow..  72...............IAKSVMTVKYSRQASPEQIKRFEEVFKNSLMQFYGNALLEYDNQD------IRVLPSSAKPSDDRASVNMEIRDSKGTVYPVSYTMTNLAGGWKVRNV... 163
3 -6.940[L] COG0266 Formamidopyrimidine-DNA glycosylase  ali follow..  13  171....VGVGNIYANESLFRAGISPRPANRLKKKECALLVETVKAVLRRATGGSTLRDFVDSDGKSGYFQQYTVYGRHNQPCPQCGGLVVK-GQRGTFYCPNCQK............. 275
4 -5.960[V] KOG2787 Lanthionine synthetase C-like protein 1  ali follow..  222................LAGIMNVLMHTELEPDEIKDVKGTLSYMIQGSKSDRLVHWCHGAPGVALTLVKAAQVYNTKEFVEAAMEAGEVVWSRGLLKRGICHGISGNTYVF..... 329
5 -5.600[S] KOG4090 Uncharacterized conserved protein  ali follow..  10  52QPGLMAQMATTAAGVAVGSAVGHTLGHAITSGGSNAEPARPDITYQEPQGTQPAQQQQPCLYEIKQFLECAQNQGDIKLCEGFNEVL-----------KQCRLANG.......... 149
6 -5.590[TV] KOG1739 Serine/threonine protein kinase GPBP  ali follow..  13  4..........................NQSWNSSGSEEDPETESGPPVERCGVLSKWTNYIHGKNNALSYYKSEDETEYGCRECRFDISVNDSVWYLRAQDPDHRQ-QW-IDAIEQH 115
7 -5.500[S] COG4014 Uncharacterized protein conserved in archaea  ali follow..  12  2.............QGLNASVLEAPRGESMADAEEITAVGRNKKPIL---VGNAVKYVN--SDTVSRVSEIKKDEEG........................................ 59
8 -5.490[S] COG3091 Uncharacterized protein conserved in bacteria  ali follow..  58..............RLNPVLLLENKQPFIDEVVPHELAHLLVYRQFGRVAPHGKEWRWMMEQVLKVPASRTHQFEVASVCQQHSLTIRRHNKVLRGESERCRQCGEKLQFITINP. 169
9 -5.450[J] KOG3419 Mitochondrial/chloroplast ribosomal protein S16  ali follow..  11  2..............AFTFVFLGSSIGFGPLKTTNWNLLSGYGNIPHQRRPRSRSKWYNPAGLREGVIRLHLRKRINDHVCQFFLSF.............................. 77
10 -5.270[T] KOG2265 Nuclear distribution protein NUDC  ali follow..  137.............................DAEVEDEDSKLMKPNSGNGADLAKYQWTQTLQELEVKIPIAAGFAIKSRDVEKTSVSVGLKNQAPIVDGKLIKVENCNWVIEN.... 226

FFAS is supported by the NIH grant R01-GM087218-01
1 3 5 0 8 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.