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Query: PF11563.8; F0XJU9_GROCL/20-199; Protoglobin, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst LDARIQYLHSFLDFSSTDIDHLVAGAKYIKVLIPAVTNIVYRKLLQYDITARAFETRSTSFEGPLDAVPAEDSPQILHRKMFLRAYLARLCSDPSQMTFWEYLDKVGMMHVGLGRAHPLHVEYIHIGATLSLIQDVLTEAVLSHPRLSMGRKMGLVKALGKVIWIQNDLFAKWYVRDGEELast
1 -85.000PF11563.8; F0XJU9_GROCL/20-199; Protoglobin  ali  100  1LDARIQYLHSFLDFSSTDIDHLVAGAKYIKVLIPAVTNIVYRKLLQYDITARAFETRSTSFEGPLDAVPAEDSPQILHRKMFLRAYLARLCSDPSQMTFWEYLDKVGMMHVGLGRAHPLHVEYIHIGATLSLIQDVLTEAVLSHPRLSMGRKMGLVKALGKVIWIQNDLFAKWYVRDGEE 180
2 -11.000PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin  ali follow..  10  9.............................DATVRALTRRFYELMDTLPEAARCRA---------------IHPADLSGSEAKFYDYLTGYLGGPPVYVEKHGHPMLRRRHFVAPIGPA------ERDEWLLCFRRAMDET-----IENAKLREIIWAPVERL.................. 115
3 -9.630PF00042.22; GLB8_CHITH/9-115; Globin  ali follow..  1.................QLALFKSSWNTVKHNEVDILYAVFK---ANPDIQAKFPQ--AGKDLDSIKDSADFAVHSGRIVGFFSEVIGLIGNPENRPALKTLIDGLASSHKARGIEKAQF............................................................ 99
4 -7.620PF09057.10; H3BFM1_LATCH/19-257; Second Mitochondria-derived Activator of Caspases  ali follow..  54LSHGALIKRAVSLVTDSANTYLSQTTLALIDALTEYTKAVHILVSLQQQYANLVGKINPKEEEAIWQVIIGARVEMNEKQQEYLTSAVNLSQVAAEAAYQA-----GADQASVTVHTCVQLAQKQVLNAESKLAEVQVEEIRKTSERERTASKNTGTRKKTEAEETEDDIPEQYLRED.. 239
5 -6.750PF17926.1; A0A0M8TSQ2_9ACTN/70-180; Tetracyclin repressor-like, C-terminal domain  ali follow..  2................................LVDYTVRLHDVFTARPDLQRVAV------------AWLHDGSRPTPLAAQRLDSYRHKI------RTITEAQRDGLVEA--SWEPHHLLVMLITLATSWLMAPAEVRQIAADSGASAERRAQVRFAAER................... 111
6 -6.560PF16231.5; R7EG02_9BACE/20-133; Domain of unknown function (DUF4890 topsan)  ali follow..  18.ERMTERMVKEYSLNDTQKQQLLEANLALVEKMGDMPMHRAKAYKHHKRDGK--HQLTDEQRAQKKAEMEKKREEMKTARIAYDSQLQKIMTEEQYAAY................................................................................. 114
7 -6.430PF09147.10; F5HGM6_PHOLL/3-201; Domain of unknown function (DUF1933 topsan)  ali follow..  24......DELSTGTILFRSTTKVSKFKS------ERYTAFLIGNIYNISTIRSILGKIEGRSSVLS------DVEILLLSRDKFGNSIISIAEGDYCLFIEDKKGNIEVITESRGLNLVNLVDLIWITNSLKIVGKPESEVIKNSLKPDNFSPIRNVSRLKPGTINKLTFDEQRYLHLEVE 197
8 -6.350PF14005.6; Q81R29_BACAN/60-193; YpjP-like protein  ali follow..  12...QEAEKQSMQKFGTKIGPVIDEFKDVILPKIEEAIAELANDVPEESLQSLAISQKPAGGNNEKIFHVYDTKTHVRRDHPPQDGYYFNFHYHRFDDGYSGH-HELGNIYWNTNVPPKW............................................................. 134
9 -6.250PF16847.5; HPAB2_PSESM/266-356; Avirulence AvrPtoB, BAK1-binding domain  ali follow..  10  6..................................................RAAMRNRGNDEADAALRGLVQQGVNLEHLRTALERHVMQRLPIPLD---------IGSALQNVGINPSIDLGESLVQHPLLNLNVALNRML....................................... 87
10 -5.980PF17938.1; A0A0F2RSS2_9RHOB/90-208; Tetracyclin repressor-like, C-terminal domain  ali follow..  2.............................LAAMRRLVEFTYDFFDSNPLFVKILRNENLLEGRF-----IVETEVVRISSQPLIDAISRIIARGLAQGVF-----------RHGYDALQIYITIVALSAHHLNNGHTLTAIFGVDLLSPEWRSKRRAHAVSLV................. 119

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Bossy-Wetzel E, Barsoum MJ, Godzik A., Schwarzenbacher R, Lipton SA. Mitochondrial fission in apoptosis, neurodegeneration and aging. Curr Opin Cell Biol. 2003 Dec;15(6):706-16. Review.