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Query: gi|16759009|ref|NP_454626.1| hypothetical protein (STY0016) [Salmonella enterica subsp. enterica serovar Typhi str. CT18], from S.typhi

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNPIIDGIIALEGGYVFNPKDKGGATHWGITEATARAHGYAGDMRDLTHAEAYAILEEDYWIKPGFDVISTLSWPVSFELCDAAVNIGDYHPSAWLQRWLNVFNHEGKRYPDVHVDGNIGPRTLAALEHYLAWRGQEGEAVLVKALNCSQGMYYLNVAEKNHNNEQFIYGWIKNRVTLast
1 -5.750HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523;  ali follow..  17  12............................................................................PLMFFDRAVNAQRSQLLTVMADAVSECRTAADQAAELNETGQVGLLRLAEVWSAIRAKEGMGGLILAKILSDVVAQFYAYLAELHYMMSSLMLGWFE.... 127
2 -3.240PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;  ali follow..  10  1...............................................................................MYTIQANPSGTRSMEISEENLVTIEKYSLFQHLIDSNGIVDEAVLEKLK................................................. 49
3 -3.110PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]  ali follow..  10  1...........................................................FYEAHFKRYIKEHVKGKKTGLFTLGADPAGEHGESMLKVGRELLNEGGEILAEFICQGAIDPKVIEEMKEMAAKMGDKAIHLITPERQAT-----WKQASTHPDENDLKNA....... 114
4 -3.110PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;  ali follow..  12  2.........................................ANLDVLFERLSRSSFRRRFR----------LGVQEQQYLANKGMETILEHGKDFIAQRLAP--------AEIPNDGKQTPCKGHPVFLAQHATGTCCRGCI-KSLSQEEQAYILDVIAH----------WLDLQKE 117
5 -2.770PB048420 Q64S71_BACFR/1-165 PB048420; Pfam-B_48420;  ali follow..  10  7.......IVRSEN--AEYLCHNVNGTYVDVSDPSTEFVSGEDDFRLVDPDSSLTRKEYEFFYGNGWLALTLQSVEDETEYIVLSVNLESMDALDLPDRTFIDVNHYPDAMEFLETNNLATYSGYKRRSGFVEYPMAVLNLPLLYQHAPQIFQEANI..................... 163
6 -2.720PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033;  ali follow..  10  7FECKIRYEKVMENGMQKKVTEP-TEAEARIIEEMTPFISGEFTVSDIKRANYSELFPSDEESADRWFKCK-----LIFITLDEKSGAEKKTSTQVLVQAADLRDAVKKLDEGMK--GTMADYQIGMVSET............................................... 136
7 -2.630HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;  ali follow..  118.......................QIAKYNTFLENITDCPMEESKKEQWSAEVKCLRAYFFLNLAFY--YTDVPMPLKTLSVDEANSISQTPQTEVYSQVEKDLKTAIDLLPV-HYLRGIWRLPGGG................................................... 217
8 -2.600PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete)  ali follow..  11  1..........................................ENTQIKLSETVMVIDVAYLNFVINDLRKDLALFTMYLAMDAGLKGSDNDVQVLLVYDKQSGKLEHCLPSDLKNEASLGEFSFMAAPSEGFVSRGDLYLDLLQIVLNAAEVKKLIVVPFNEEYGKEVENVLRECAL 155
9 -2.470PB022697 Q5LAY4_BACFN/1-165 PB022697; Pfam-B_22697;  ali follow..  39.........................................ETMPLLTGEQHSLLAYQIFRDEVMFGGFCQLGYIFDNPFAKVMRLWGAEDFSKLVYKAKKIYDAHRHDLEKERTEDEFMYEQYEAFDDLEEEDIEEEVTALVASYVDDHLELFAKIV................... 165
10 -2.390PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete)  ali follow..  16  68............................................SAWLHHKGRNKHHLEYWIDYAVSKGMKMPIRVCEMFIDRSASKNYQKEKYTDKSALEYYEKSVDHY-------MIHPDTKAMLEYLLVMLSVKGEEYTYSYIKKE............................ 178

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 7 3 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Topczewski J, Godzik A., Paszewski A. The Aspergillus nidulans cysA gene encodes a novel type of serine O-acetyltransferase which is homologous to homoserine O-acetyltransferases. Microbiology. 2000 Oct;146 ( Pt 10):2695-703.