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Query: gi|16759013|ref|NP_454630.1| hypothetical protein (STY0020) [Salmonella enterica subsp. enterica serovar Typhi str. CT18], from S.typhi

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIDAPALGNAKLTVEIADATQADERTVTLIANQPQLITRLLAGHHYTVNLQPAMINNRFISAPIQLTGFIPAAAQVAEVAVAYQQSALDTASFVTVDATILGLPDGVAPQRYLFSSGKYQYSLMLESGSDRQTLSLRFAPGLYDVQTDDIFIDSVPWRCEQAGPLRLLQKVNHVALEFLPGVTLQVKGWPDYLAHGGVTVNAPETVSLYRDIPFSALFKYDGFDGGGDPVPAAEVDVNGDVFLDYATLPIHKTVALVRQIEKEAGRSVMPVMVIYTANASGGSALVDLQDAQKLRNHFGNFITQCLAAQSYKDETHPVPATFVLNPDFLGALQQGPYGYTVVRQKNSVPVNAQLAAAIQALPAMAGFIAPSLPTFSDDLYGYIQAVNYLVRQFAPDVAFGWQTNVWATGTADWVLRDTADPVAEGQAIAGFIHELGVYSGEYAPDFIAFDEFERDCFSPDALAHYGWNATCWLNYLAMVKQVTKALLTPAMLWQIPGGHMPTVEEGVSKISAAHFASGGTFFMGDARIGSDPDTLSLQLLNTALNSATYGVPTVGDFLRKDKGYDWGQMQALNLPDFNVFSILWGGGSTISITTIHSNGEDGGWLADKMVEYYAAPRYFRLast
1 -3.370PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  18..................................................................................................................................................................................................................................................................................................................................................................PGNMKGQSLKDILNSSAVKNAVTSVTG---------KAVTFENLQG----TWMYVNPALQLEGDNALKNVAGSLAEYCAKVGIVEGVFNYVFNSDSTFTSALKRGSLKGTYSVSPEDKTVTLRYLTLLFNADKLLKFLSTVSSISSNTTLKAINKLASEYDGMMLGF................................................................................................... 203
2 -2.930PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;  ali follow..  11  13..........................................................................................................................................................................................................................................................................................................................................................................................VLGLVAALTEIRHSHKRRA---------AEAKGESLPEEPVRVVPPGCCGMHITCEKDSLLTAVSKSIVYYDDEELDR--YAGVLPEEYNTEAVEEFEEILSTLQEE---EVPSWQMPISIKEQALFIVSEHRIQHRHD....................................................................................................... 146
3 -2.890PB050904 Q64SA2_BACFR/1-230 PB050904; Pfam-B_50904;  ali follow..  11  71...................................................................................................................................................................................................................................................................................QIHKWEKQYNSYLKTASGYASSLKACTHLYNDGVRIFLTLGKLGKAIQNNPQGIVASMNMNNLYI-ETATELVSVFTLLNDAVAKGSNENMLTGAERSKTLWALNDQLSDFSRKLHLLYLSIRYYTFNDVWNNVTAGMLDRDNGEAARMA................................................................................................................................................................................................... 219
4 -2.890PB029229 gi|150007903|ref|YP_001302646.1| hypothetical protein BDI_1263 [Parabacteroides distasonis ATCC 8503]gi|149936327|gb|ABR43024.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  43..NAPQADPEGMCVYFYPEEGESPIRFDFAGKDGGSVE---KEGRYRILCYNNDTESLLFRGMEGFDTHEGYTRDGNVFESIYGGSCARNVEITELGLSYECISFADKDKVEWIESSEHVITLYPAELICTYTYEVRNVKNMEYMTQACGSLSSMAPSMLFANEELDRECVTVPFETELHLESSKMTG--KFYTFGHHEENARP................................................................................................................................................................................................................................................................................................................................................................................................................................ 265
5 -2.850PB144506 _Gut.Meta.Jp.0101058_ gi|162866171|dbj|BABB01003836.1||1 (- 121:946~0 complete)  ali follow..  42.IELGGNIEYSGNNFWGNRSNKKFPVFKYTHGRSASL-KITIDENLFPLLSIKSNNGRLAIRIQDGTRIKPTQYVIEGSSKTLKYLKTSGPMDFEAQNAFSEDQSGSSDVKFPHNVKLRLGEFSVS--------------GSGDLVFADLDCKNLTSKVSGSGDITLKGKADEARYSV.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 208
6 -2.780HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  14..........................................................................................................................................................................................................................................................................................DIAKQNQEKAWQVIKNTNIIQIWEDAGAKINLVGSLRTGLLMHRDI-----------DFHIYSSPLNLTDSFQAMARLAENPSIKRIECANLLHTAEACIEWHA-----WYQNEENELWQMDMIHIREGSRYDGYFEKVAQRISEIMTDEIRETIYETPETEKIIGVEYYQA--------------RDGVRDYSGFKEWRKQHPVTGVVEWM-P............................................................................................................................ 203
7 -2.510PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033;  ali follow..  10  11..............................................................................................................................................................................................................................................................................................................................................................................................................................................................IRYEKVMENGMQKKVTEPYLVDALSFTEA-RIIEEMTPFISGEFTVSDIKRANYSELFPSDEESADRWFKCKLIFITLDEKSGAEKKTSTQVLVQAAD-------RDAVKKLDEGMKGTMADYQIGMVSETPLMDVY..................................... 142
8 -2.380PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF  ali follow..  6.....................................................................................................................................................................................................................................................................................................................................................................................................................................ELRKKSIAEYLLYMWQIE-----DIIRVYGCSLTRIRKEYIDKFDYTDEQKEEEEDWFGDLVRMMNQEGCREN---GHLQINKVVMQALTELHTQKFPFY---SAEYYRVLPFIVELRGKTKQVADRMARKNEANLKEIAAN---LGHSEVETCFDVLYGVMM-QKKEISRETETAVKEITTLIGMLSDYYQK...... 191
9 -2.260PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]  ali follow..  1....................................................................................................................................................................................................................................................................................................................................RADEFGYLFLDRP-----------PYQVLASSAITYEEMLRLHAIEGLLKYYGNSHLADHAFAYLAATAFDGSYFAIYEALAAWWEARGLLRRGHSQRDLFNHLASFAIHLARGIATRVTVPPLPGYHDSILEINSHGDT---SGAEHSGCARNLTPAQLDRFYQLLKFDC--------------LCRDRSRNFPGWMPPSPLTEEERSNWMARITTPRSMEKYMPGLVKESPLRRHGFIELFPCHPERPEEDNPTIVFFYYG................................. 239
10 -2.130PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;  ali follow..  8...........................................................................................................................................................................................................................................................................AIDIKNQFHHNWMGMSQINQTTSGNFYSHR-NITDQVLENFTDALDC--TAHLMLECSEVLAGVKPANLISIVNRTRPCGRNLYLLWQQHTDLAQRLNNLNFMVLQSRQQSLLLLCYDHVRLEHHLSHPGIRTL-LHKAGYKDDADCEGMLLELRSRIGGNNSFPHEIGLFIGYPAKDVAAFMGLVRLPFTCQRLWKIYGNPARAEQYRCCRNKMGAILARGTSKTLEIDRSDHPFFCQTDENDYQY.......................................................................................................... 256

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 9 1 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.