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Query: gi|16763391|ref|NP_459006.1| thr operon leader peptide (STM0001) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-21), from S.typhimurium

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20
# Score Template Links and tools%idFirst MNRISTTTITTITITTGNGAGLast
1 -0.897PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete)  ali follow..  15  1MRKLGFTLVAALAFSVSAFA. 20
2 -0.660PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;  ali follow..  23  158....PGTDYHLPIFQSGFGDG 174
3 -0.480HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397;  ali follow..  26  171MERVSMVLSNTVQLQDWDG.. 189
4 -0.251HGC00993 gi|163626727|dbj|BABG01009540.1|1.0 TMP01352;  ali follow..  28  6...LSTFAMMGLTFVIG.... 19
5 -0.045PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]  ali follow..  25  20VTELYTDEKGCVSITIGLGD. 39

FFAS is supported by the NIH grant R01-GM087218-01
1 2 5 3 1 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.