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Query: gi|16763392|ref|NP_459007.1| bifunctional aspartokinase I/homoserine dehydrogenase I (STM0002) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-820), from S.typhimurium

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTIGGQDALPNISDAERIFSDLLAGLASAQPGFPLARLKMVVEQEFAQIKHVLHGISLLGQCPDSINAALICRGEKMSIAIMAGLLEARGHRVTVIDPVEKLLAVGHYLESTVDIAESTRRIAASQIPADHMILMAGFTAGNEKGELVVLGRNGSDYSAAVLAACLRADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQFQIPCLIKNTGNPQAPGTLIGASSDDDNLPVKGISNLNNMAMFSVSGPGMKGMIGMAARVFAAMSRAGISVVLITQSSSEYSISFCVPQSDCARARRAMQDEFYLELKEGLLEPLAVTERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATTGVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQTWLKNKHIDLRVCGVANSKALLTNVHGLNLDNWQAELAQANAPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSSMDYYHQLRFAAAQSRRKFLYDTNVGAGLPVIENLQNLLNAGDELQKFSGILSGSLSFIFGKLEEGMSLSQATALAREMGYTEPDPRDDLSGMDVARKLLILARETGRELELSDIVIEPVLPNEFDASGDVTAFMAHLPQLDDAFAARVAKARDEGKVLRYVGNIEEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSWKLGVLast
1 -2.240PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]  ali follow..  10  34..........................................................................................................................................................................................IWGEVVDEATGKRVLTDQGSEGIRVRLTELSWGDNVPDFYCMMDGTFQNT--------KIFKGEYNVRIDGPFIPLVR-ENTDGTLLHDGSVNTEISGTTKVKFE--------------VQPFLNVEFVGNPQVSNGVIK----AQVRVTRGVSDEVFREKIQPMGNWKDEYLNVTDIQFFVSYSNTVGYRARDERWSSSINYEGKSFEGLLGKEVTIQSNGNVPSGRKVFVRAAARINYDTPVGSGTRRWNYSEPME........................................................................................................................................................................................................................................................................................................................................................................................ 267
2 -2.050PB092941 Q45777_BACTN/1-139 PB092941; Pfam-B_92941;  ali follow..  10.QITPFGGIFCVMEEFDALLSNIIDSTLGPRTK----TFGYQYSEIFRSLMCVYFCGGSCVEDISTHLMSHLSFHPVLRSCSADTIIKELTVPNITYTSSVSGKSYDFNMADRMNELLRQGTHIYRRI.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 135
3 -1.970PB053359 gi|153891307|ref|ZP_02012332.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]gi|151582630|gb|EDN46158.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]  ali follow..  16  7........................................................................................................................SFPPVGRSIAYRCAFQLLAQMALRRELPEGVAPAQVRGALTAVIRRTLGAPGTFDNDTGNDGAGWLRIGLAGHQPG-LGEVYISTGSLYLCAFLPLGLPASD-DFWSQPDAPWTSA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 123
4 -1.900PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)  ali follow..  13  228.........................................................................................YFAPWESYFLLAEAAEYGWISNITPKEAYELGIRSSFEYFDQYINSTTRNRLGTSVAFDDTVEPTSEVMTYRDGYTNTDQIQEVVYNYPTASK--------YGKAMNDHLTKI----QKYIAQMPYQVLEI-----WND-----LGLPFFEIPANVLKKDSWKNGQQWDFYPQRMRYPTTLDNADPENYQKAVELLGGSDVIITPL............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 435
5 -1.850PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;  ali follow..  12  99..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................EQEYENQLKDILETIIGVEDVSIVVNVDATSLKIFEKMSSDEEIVIIKNGDKETPVVVQ---RGVLVVAQGIKKTIIEAVTRVLDV 215
6 -1.840PB000795 Q74Z21_ASHGO/1-280 PB000795; Pfam-B_795;  ali follow..  16...............................................................................................................KGIYEDRLRQFIDNGGDYRDLNLPKFYDRQRKRIDSTRVKVQYYQVPYDRHKPPVAPEKRPPWEEVVRRDR---------------------AGEIEWKDVYLGQPFGPSWSTTWFKVELDI---PESWSSSGEQLVFEWDCENEGIVIDGDTLRTEYLLPLGRSSVSFYIECGNNGMFGVGRNNNSINPPDDDRYFHLQKADLVWPNWQARALYIDFWMLGDAARELPDNSWQKHRARELGNLVMNMFDPEDSTVDKCRKFLQKEFFDKYTDDP.................................................................................................................................................................................................................................................................................................................................................................................................................................................. 278
7 -1.840PB022506 Q11RP6_CYTH3/1-298 PB022506; Pfam-B_22506;  ali follow..  10  1.............................................................................................................................................................................................................................................................................................................................................................................................................MLSDITVRYKLNNSIKDSRFETEHLAKYHLSF-----NFELFRICIVDGDSNRCLFLEDYTLADIYTTNDLL---------EQLDILFEDHILIKAGFWKSITVGFKNTQFSLIPEALFEKDYLKEYLTLNTTLDREPD-----------EEYHFYKQRQTEAVNVF------------------ATNQRLTSWFNKTYPLKQVRYVHHTA-----SMIEGIMLQKDKNAAEKSVFIQVEQYFLTIIVKQGKKLIFCNSFTFN--------------TSEDFVYFILFVFDQLELNPEKCPVVVFGEITHDSESFSKLYKYIRHLTFGSKPEFVRFGYQFDEVFDHRYFDLYN...................................................................... 293
8 -1.780PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;  ali follow..  14  52........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DGKNIESVLMQHIEKVEEAQVEVEKVHKRLDIINNRMSFCIQKVGMVRYNAFADMGSDLSYSYALLDENNNITGIYGRSE-----TVTYAKP--VKDGKS........................ 147
9 -1.750HGC00870 gi|163286116|dbj|BABD01024572.1|2.0 TMP01154;  ali follow..  1.......................................................................................................MLYTAEIKTHQEGKMKETILLFHDKDTLLKIEMALFPLHVRLRRVAKEDYVQPLGALAGVK---IPRIEETYEGDELSDTLFVFAFFSDNRLNQALAALRKSGFPYKAILTPTNQNWNALQCFSEI----RREHETIQKQLKGNKEQAEE....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 149
10 -1.620PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;  ali follow..  94..AAAVKAEQVKDSKTVESLGKELKASAPEYEGCVAENA---------GLDAAAVKLNEQADWYETHEKSLSKAVRAVVESKAAKRLDDAKTNLTAKLDEASKLLAD......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 190

FFAS is supported by the NIH grant R01-GM087218-01
1 2 4 1 8 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sasin JM, Godzik A, Bujnicki JM. SURF'S UP! - protein classification by surface comparisons. J Biosci. 2007 Jan;32(1):97-100.