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Query: gi|16763393|ref|NP_459008.1| homoserine kinase (STM0003) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-309), from S.typhimurium

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVKVYAPASSANMSVGFDVLGAAVTPVDGTLLGDVVSVEAADHFRLHNLGRFADKLPPEPRENIVYQCWERFCQALGKTIPVAMTLEKNMPIGSGLGSSACSVVAALVAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENGIISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQPQLAAALMKDVIAEPYRARLLPGFSQARQAVSEIGALASGISGSGPTLFALCDKPETAQRVADWLSKHYLQNQEGFVHICRLDTAGARVVGLast
1 -3.410PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;  ali follow..  26........................................................................................QLKGEGGSGEPGIQMSFNQLTMDSTFQSIAPVKKFLQIDYCIEGCYEVEYQNGTVSFLGEGDLCVTDLSRQVFVSSRLPLRKYRGVTLFLEVEKAQHTLSAGFPQEINLAGIVNELCGKEQSLLVKSREDVERIFGKLSEVDERIQAPYYWIKTMEL................................................................ 190
2 -3.090PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;  ali follow..  11  108.............................................................SNKLVPAAIVAQSSIGAKAGSK---RGDLAAVMAIGGAATMHLLSLLIFVGFLGTWLVSVEVIEVAR------------LYIMPSLMGAVLV............................................................................................................................................................ 187
3 -2.700PB002776 gi|157737147|ref|YP_001489830.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]gi|157699001|gb|ABV67161.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]  ali follow..  165.............................................................................................................LEVIEQFTYPKYYIASFLKESYNSSVWGHYGQG-------GVCLIFETNNEKLKEVNYNGNFEEIPLVESFYIDENKNKSILFDKVLNNQEEWRKLFWDKYEKNKLTKTKD--------TYEKEYR--IVLNRLMDYEIKEEDRKLKYDFNCLKGVIFGIKTPQNKKDEIIEIIINKCHENNILDFEFYQAFYC...... 367
4 -2.610PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]  ali follow..  12  6..................................................................................................................................................................................GYLFLDRPPYQVLASSAITYEEMLRLHAIEGLLKYYGNSH--LADHAFAYLAATAFDGSYFAIYEALAAWWEARGLLRRGHS................................................. 85
5 -1.980PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890;  ali follow..  10  17............................................................................................................................................................................LLFACPIIFASIMK-KEFIGRTAKSLSLALAIFSGCIFGSVLPAWSQEIVAGELERCFLA-MPESVLPIVTMEERNDLCRRAGHLSGFTHTASLESSLGGTVTFLLNRNFIRIQTSTVGEVFMRILPFSDSSSVI.. 149
6 -1.690PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;  ali follow..  10  20..............................................................................................................................................YDYMIIEGDTIPREFIDLEEVIILNKIKFTSDLERRRYLILRRKTRKVWPYAKLASERLSELNARLASIKS--KSERRKYTKIVQKYIEEQFA-------AELKKLTRTEGQILVKL--TGVTTFQLIKNDTTAGLFDIELKSEYNPVNNREDFLIE.......... 179
7 -1.690PB015954 Q6WBB3_BIFBR/1-225 PB015954; Pfam-B_15954;  ali follow..  19.PEYGMGKPNNDYGRGF---------YCTRSIELAKEWACAGLYTLTTDGLTFLDLSQPPYTILNWLALLVENRRFQPTTAVAAQGIEYLRQVFLPDISQADVIVGYRAARTFVNNAISLDQLADAMRLGELGKQIVLISSRAFAALQDCEIARASTYHVLRNERDVTAREAYRRKSAEADIDGLFMRDIIREKVTNDDP............................................................................................................. 224
8 -1.660HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;  ali follow..  16  86...................................................................................................................................................................................................................................................GIRQCALEKGVATCGDCLDLERCPTVGEILENNPSALKNLKG........................ 127
9 -1.600PB004476 gi|139436894|ref|ZP_01771054.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]gi|133776541|gb|EBA40361.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]  ali follow..  45.........SQVAYPNTIIAGVDVSFSNASSAATKVN-SAWKHYKLTVTGDDFSWTYQPESNEPIVDGEAAAKEIISHNEAFVVRLVESLSGKTKTTATSNEVDLDQDVDLSMLSDTFDQKKFEKDLGAAIDEFNEGRSGTFEANSSYGKFTVEKARSNEKLNREHVIKYAELELASLAETVDLSKLGNDAYEPLNGTLTDDQIQAACNAANNFLGVNVTLKLNGEDAGKVDGSSVLQWISFADPANPTLDTSQISSWAA-------------ELANGFNTVGSTRWWTRADGKQCAVEGGDFGWSI.. 334
10 -1.500HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920;  ali follow..  74..YATFNVKVTNTGPGKTSV--------QIYGQAPYTEGGLEKVAIQLLNEKSSELAPGASEIVSVKVDLQYIASYDMEHDNGDGTTGTYVLDPGAGNGAHDALNNILVLDESKMVGTGSAAAAVAQEITEDLISRTAFSVSKTGEKISNQIPYADWNYYQPGEVTYLTRADWAGTFPKTYDQMTLTSEKLISDLNGNSDIKWGENSNLMFYQMFGLDFD---DELLDKMTLEEAQYLATYGGPSIPGVESIGTVETYMTENAGNGVAVNLNASK.................................. 360

FFAS is supported by the NIH grant R01-GM087218-01
1 2 5 2 2 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Alonso A, Rahmouni S, Williams S, van Stipdonk M, Jaroszewski L, Godzik A, Abraham RT, Schoenberger SP, Mustelin T. Tyrosine phosphorylation of VHR phosphatase by ZAP-70. Nat Immunol. 2003 Jan;4(1):44-8. Epub 2002 Nov 25.