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Query: gi|16763397|ref|NP_459012.1| transaldolase B (STM0007) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-317), from S.typhimurium

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTDKLTSLRQFTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQSSDRAQQVVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRIIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVYLISPFVGRILDWYKANTDKKDYAPAEDPGVVSVTEIYEYYKQHGYETVVMGASFRNVGEILELAGCDRLTIAPALLKELAESEGAIERKLSFSGEVKARPERITEAEFLWQHHQDPMAVDKLADGIRKFAVDQEKLEKMIGDLLLast
1 -3.230PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;  ali follow..  11  123GVIAMMERNDGPTLVVDSQAIDVVHPWTLDRSSGRPSIAMAYQQNGGRLDPFVEGLEALETLQDGDRVLISEANDIGMVQIPNKLEAALGGK-KLQIEHAFGREFPELESGGMDGLKLAIHCGIDAQKMQQRVPVTNYGV-FFSWAAWPDALRRALEPWGVE........................................................................................................................................................... 311
2 -2.780HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833;  ali follow..  14  104..............................................................................LDRLCYVGKRGMGALEFEPSSPINGMNESSVLHIEELTELAKSVFTDRMAFQVQLRQEGRNI---LDILKVG....................................................................................................................................................................... 172
3 -2.130PB060121 Q64SA7_BACFR/1-251 PB060121; Pfam-B_60121;  ali follow..  64..................................................................................FAFIRMDSGEVDVVFYPCYNEEQQKQLLDGKSIIADVAMADGRRSKAFVQIDEETKQVMYVPT---PIIARNLKMHLGTVEVNGMQHGEPLTVA............................................................................................................................................. 167
4 -2.110PB092941 Q45777_BACTN/1-139 PB092941; Pfam-B_92941;  ali follow..  1.................................................................................................................................MAKIQIKSEGIFCVMEEFDALLSNIIDSTLGPRTK......................................................................................................................................................... 41
5 -2.010PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;  ali follow..  21  1.................................................................................MYTIQANPSGTRSMEI----SEENLVTIEKYSLFQHLIDSNGIVDEAVLEKLKLNIRSLIASQEEDSKDL...................................................................................................................................................................... 66
6 -1.910PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  15  2................................................................................................................................SYISVP---------RDLTK--VKSKVMFNLTKRQLICFGMAVLIGVPSFF.......................................................................................................................................... 41
7 -1.890PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  26  264............................................................................................LMTETLARVYVE-QKNFSKAKQAYR----------ILSLKYPEKSG-IRAIEKLQEN........................................................................................................................................................................ 313
8 -1.800HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178;  ali follow..  12  14.............................................................................................KEQVETQLAQEQHKLKRLENRKKYLEKGERQKRTHRLCNLGGTIESLPEFKDLTRTEMTELMEYIFSLPEVQRAVRH................................................................................................................................................... 91
9 -1.670PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  14  146......................................................................................KFIKGHVTLIGCPKL--DSVDYSEKLTEIIRRNDIQSVT---VRMEVPCCGG-AKKALQDSGKFIPWQVATI............................................................................................................................................................... 216
10 -1.660PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;  ali follow..  18  3................................................................................................................................MSVTFPP---GRPLSNFLLEG-TIMKLTVYFDGTFWFALVE.................................................................................................................................................... 39

FFAS is supported by the NIH grant R01-GM087218-01
1 2 4 1 8 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sasin JM, Godzik A, Bujnicki JM. SURF'S UP! - protein classification by surface comparisons. J Biosci. 2007 Jan;32(1):97-100.