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Query: gi|16763399|ref|NP_459014.1| hypothetical protein (STM0009) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-188), from S.typhimurium

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGNTKLANPAPLGLMGFGMTTILLNLHNAGFFALDGIILAMGIFYGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKMGLTDAPDAQLLGAYLGLWGVFTLFMFFGTLKAARALQFVFLSLTVLFALLAVGNITGNEATIHIAGWVGLVCGASAIYLAMGEVLNEQFGRTILPIGEAHLast
1 -5.020PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;  ali follow..  17  36...........IGILSFASTFEL---------EDKSSTVSMALMVFGTGLFLLGIFRLF................................................................................................................................. 74
2 -4.900PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;  ali follow..  16  2................MMSVTFPPGRPLSNFL-LEGTIMKLTVYFDG--TFWFALVEHVNRKGQYKVFRYPFGK.................................................................................................................. 56
3 -4.660PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;  ali follow..  11  4..............................................GIPEQLIRRLSDASRLVPLALLAVVAAVIYVWRPLFH-----------------------GLIYRVAYSPSLLILVGTTVVAGIALVFWPRMGEDPLESAVTKWSILGT--IVVAALVLSVAYSIPAGMAEERSLAQDATAD 120
4 -4.440PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;  ali follow..  11  1..........................................................MKEKESKSIIVYCFGSYMNYMRRQYEIMGYRLPRAVTWRALGYFAAVEAGLVAFRFLPPFKWIFGDMIDQVWLMYYGVIPLFLVWGADKYKTDGKSLFSFVRSWITFRL..................... 109
5 -3.860PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520;  ali follow..  19  117...........TSVALLVLTSILLGLDGL--FDVNTGSLPLLVALGGSVSLAYGALLLSYEARYSAATT....................................................................................................................... 172
6 -3.430PB009534 gi|153852721|ref|ZP_01994158.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]gi|149754363|gb|EDM64294.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]  ali follow..  105....................................................................................................VMVVMISFFGAAFSTMAFNNDVGVTKMFGQIYELL----TGTKSNGFTILEFMYCIGIIIGILTFF---NHFGKKRLSVDPTPM.... 181
7 -3.350PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF  ali follow..  13  1.......................................SIVYAIGGLLMAVGTGLYAFF-------IIQDVACIVMLIGAICFATMQMRQQYLGTNLTIRRLRKIMVLADIGFILA--GLFMVEDSYGFVKQYLANSIGGYTTYVNIFYHNWVVILLIATALEVYTLH................... 121
8 -3.320PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  1.......................................................................................................................MKTKFIYVVLMALFLGSQMTLSAQNEENKERKQRPTPEQMMQMQTNQMVRALMLDDATAAKFTPI.... 65
9 -3.300PB053138 Q73Q90_TREDE/1-298 PB053138; Pfam-B_53138;  ali follow..  13  210..........SLGMSTLFLPDVQYHFHDLNPNDVVNHAYNVLSY------IYDNDNPIEDGNTIAGL......................................................................................................................... 260
10 -3.130PB062605 Q9F6T7_BACTN/1-105 PB062605; Pfam-B_62605;  ali follow..  34...........................................................................................................................................LDGLPPETCRRIVLGML-AAFAVLALYTFGRAAYD.............. 67

FFAS is supported by the NIH grant R01-GM087218-01
1 2 5 2 2 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Alonso A, Rahmouni S, Williams S, van Stipdonk M, Jaroszewski L, Godzik A, Abraham RT, Schoenberger SP, Mustelin T. Tyrosine phosphorylation of VHR phosphatase by ZAP-70. Nat Immunol. 2003 Jan;4(1):44-8. Epub 2002 Nov 25.