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Query: d1b0ba_ a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) [TaxId: 244486]}, from SCOP207

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140
# Score Template Links and tools%idFirst SLSAAQKDNVKSSWAKASAAWGTAGPEFFMALFDAHDDVFAKFSGLFSGAAKGTVKNTPEMAAQAQSFKGLVSNWVDNLDNAGALEGQCKTFAANHKARGISAGQLEAAFKVLAGFMKSYGGDEGAWTAVAGALMGMIRPDMLast
1 -5.190PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  258..FQPSDSLMTETLARVEQKNFSKAKQAYRILSLKYPEKSGFFADQIRAI--EKLQEN.................................................................................... 313
2 -4.640PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]  ali follow..  10  2.......................................ADEFGYLFLDRPPYQVLASSAITYEEMLRLHAIEGLLKYYGNSHLADHAFAYLAATAFDGSY--AIYEALAAWWEA--RGLLRRGHSQRDLFNHLASFAIH.. 99
3 -3.900HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;  ali follow..  10  1.......................................................................MSKKKRGEERMKEEDNILKKVGKKN-SFKVPEGYFENLTSEVMGKLPE....................... 47
4 -3.660HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  41.....DYHLSISMGNNLSYSDNYQKEAYKNYVFEKHHITEAEFDSSMV------------YTRHTEELASLYKKLGERFRSEKKHMQELLALRENKPAVSLPGDTVDVWYDRKLYWLTD....................... 143
5 -3.480PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  14  20TLSAQNEENKERKQRPTPEQMMQMQTNQMVRALMLDDATAAKFTPIYEKYLKELRECRMMNFKPRARKDAAQGT-KPVMTDAEIAKMLKDQFAQSRKMLDIREKYYNEFSKIL............................. 140
6 -3.310PB076697 gi|160881556|ref|YP_001560524.1| hypothetical protein Cphy_3432 [Clostridium phytofermentans ISDg]gi|160430222|gb|ABX43785.1| conserved hypothetical protein [Clostridium phytofermentans ISDg]  ali follow..  128TYPDIGVRIAHKNFTVLDKYLKSVGTKLL---YVQAPYKVNRDNNQL-----PYGLKDYPNKNADKLLEGLNKLKIDYID----FREVFANNFLDYPSLFFNTDHH--------------------WTTAYQYMLDYM.... 238
7 -3.070PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;  ali follow..  11  5.......EEVRTGWSVVDGQGGGIGKHITARLRQELPPEVEILA-----LGTNAAATVAMIKAGANEGATGERAIIYNAPRVEAITGSLAIILADAMLGELTPAMAAAIAAS.............................. 129
8 -2.950PB014998 gi|86133284|ref|ZP_01051866.1| hypothetical protein MED152_01230 [Tenacibaculum sp. MED152]gi|85820147|gb|EAQ41294.1| hypothetical protein MED152_01230 [Polaribacter dokdonensis MED152]  ali follow..  117..NEHIQEIIETGFDWLITPQKIATMNTLYLFGLENDWVHPELKHLIETKIIHE---SKGTKARGKHILNLIEKHQKS................................................................ 193
9 -2.800HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  144IMTDEIRETILRLKYETPETEKIIGVEYYQAVIRDGVRDYSGFKEWRKQHPVTGVVE..................................................................................... 200
10 -2.740PB001404 Q2S5L8_SALRD/1-256 PB001404; Pfam-B_1404;  ali follow..  16  154LISELEGKPRQVNRLAATRIMRVLTFQRLTDVYGDVP-----YFDAGKGALEGEF--TPHYTRQDSIYMDLH----------DELRAAVDQFDASQPTFGGADLFFN--------------GSIEQWKRFANSL........ 256

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 4 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rodrigues AP, Grant BJ, Godzik A, Friedberg I. The 2006 automated function prediction meeting. BMC Bioinformatics. 2007 May 22;8 Suppl 4:S1-4.