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Query: d1cg5b_ a.1.1.2 (B:) Hemoglobin, beta-chain {Cartilaginous fish akaei (Dasyatis akajei) [TaxId: 31902]}, from SCOP207

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst VKLSEDQEHYIKGVWKDVDHKQITAKALERVFVVYPWTTRLFSKLQGLFSANDIGVQQHADKVQRALGEAIDDLKKVEINFQNLSGKHQEIGVDTQNFKLLGQTFMVELALHYKKTFRPKEHAAAYKFFRLVAEALSSNYHLast
1 -5.480PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  14  258...FQPSDSLMTETLARVYVEQ-AKQAYRILSLKYPEKSGFFAD................................................................................................. 302
2 -4.630HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;  ali follow..  14  1...............................................................MSKKKRGEERMKEEDNILKKVGKKN-SFKVPEGYFENLTSEVMGKLPE.............................. 47
3 -3.190PB014998 gi|86133284|ref|ZP_01051866.1| hypothetical protein MED152_01230 [Tenacibaculum sp. MED152]gi|85820147|gb|EAQ41294.1| hypothetical protein MED152_01230 [Polaribacter dokdonensis MED152]  ali follow..  11  117...NEHIQEIIETGFDWLITPQYTMNTLYLFGLENDWVHELKHLIETKIIHESKGTKARGKHILNLIEKHQKS.................................................................... 193
4 -2.970HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  30..IQPDRMENILYDYHLSISNYQKEAYKNYVFEKHHITEAEFDSSMVWYTRHTEELASLYKKLGERFRSEKKHMQELLALRENKPA....................................................... 122
5 -2.910PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete)  ali follow..  1............................................................MKAIRHFITITHHKILVMQGCFRIGLLHDMSKYSPTEFLVGCRYYKGYMSPNNAERADRGYSSAWLHHKG------RNKHH 80
6 -2.900PB019278 gi|154508461|ref|ZP_02044103.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi|153798095|gb|EDN80515.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]  ali follow..  18  6.........................NFLDAMFAPYPRLTDAKVELRAMMEDAYADAIASGMTHNEAVGRVITDFGNLQEIAPVLG........................................................ 68
7 -2.840PB050904 Q64SA2_BACFR/1-230 PB050904; Pfam-B_50904;  ali follow..  10  108........LTLGKLGKAIQNNPQGIVASMNMNNLYIETVSVFTLLNDAVAKGSNENMLTGAERSKTLWALNDQLSDFSRKLHLLYLS-----IRYYTFNDVWNNVTAGMLDRDNGEAARMALSHWHRAAALV......... 230
8 -2.810PB022697 Q5LAY4_BACFN/1-165 PB022697; Pfam-B_22697;  ali follow..  43.LLTGEQHSLLAYQIFRDEVMFGGCQLIQNGYGGYIFDNPFAKVMRLWGAEDFSKLVYKAKKIYDAHRHDLEK-ERTEDEFMAMYEQYEAFDDLEEEYLDIEEEVTALVASYVDDH......................... 157
9 -2.800HGC00150 gi|162733542|dbj|BAAZ01030454.1|1.0 TMP01074;  ali follow..  16.....DELGLSAQAARNLYAGKANAQVVNYLLERFLDLTYILEQYFNDTVAAGYAAQNQLYTTISSLTRKTVKTEAGEQAARDIAHLRTS--VYQADLVTIENQFMLAVKE-VKKEIGNDFAAMQSMTAEAAKRMFTE... 147
10 -2.660HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709;  ali follow..  18  4..TDNNDDVLVKKFFSENRIDVPDDGFSRRVMRRLPDRTRRISRL................................................................................................ 46

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 8 8 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.