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Query: d2dc3a_ a.1.1.2 (A:) Cytoglobin {Human (Homo sapiens) [TaxId: 9606]}, from SCOP207

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst EELSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQLRKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEEFASDFPPETQRAWAKLRGLIYSHVTAAYKEVGWVQQVPNATTPPATLPSSLast
1 -7.640sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3  ali   10  31...RQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVH---LLPVMSVWLRRSHKDHSYWDMASANFKHAIGLSCELVVEHIQSFSMINTMLKDLFELLVACVAKPTETISRVGCSCIRYVLVTAGPVFTEEM---WRLACCALQDAFSATLKPV................... 183
2 -6.540sp|Q9Y6D6|BIG1_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Homo sapiens GN=ARFGEF1 PE=1 SV=2  ali   25......RTRGLTVMFEIMKTYGHTYEKHWWQDLFRI------FRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYLEVDDIFAQLYWCVQQDN----------EQLARSGTNCLENVVILNGEKFTLEIWDKTCNCTLDIFKTTIPH.................... 161
3 -6.200sp|Q13315|ATM_HUMAN Serine-protein kinase ATM OS=Homo sapiens GN=ATM PE=1 SV=3  ali   10  1........ELFSVYFRLYLKPSQDVHRVLVARIIHA---NSKFLDFFSKAIQCARQEKSSSGLNHILAALTIFLKTLA-CELGDEILPTLLYIWTQHRLNDSLKEVIIELFQLQIIHHPKGAKTQEKGAYESTKWRSILYNLYDLLVNEISHIGSRGKYSSGFRNIAVKEN. 179
4 -6.000sp|Q8IX21|F178A_HUMAN Protein FAM178A OS=Homo sapiens GN=FAM178A PE=1 SV=2  ali   1......KFSVTIDAIPDHHPGEEIFNFLNSGKIFNQYTLDLRDSGFIGQSAVEKLILKSGKTDQIFLTTQGFLTSAYHYVQCPVPVLKWLFRMMSVHTDCI-VSVQILSTLMEITIR------NDTFSDSPVWPWIPSLSDVAAVFFN........................ 135
5 -5.990sp|Q9Y6D5|BIG2_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo sapiens GN=ARFGEF2 PE=1 SV=3  ali   93RCKLDVRTRGLTVMFEIMKSYGHTFEKHWWQDLFRI------FRIFDNMKLPEQLSEKSEWMTTTCNHALYAICDVFTQFYEASDVFAQLQWCVKQDN----------EQLARSGTNCLENLVISNGEKFSPEVWDETCNCMLDIFKTTIPH.................... 235
6 -5.770sp|Q5T2E6|CJ076_HUMAN UPF0668 protein C10orf76 OS=Homo sapiens GN=C10orf76 PE=2 SV=1  ali   11...................EDPSKCSPRFWEELFLMKVNLEYLEGKLESLDGEELMKIKDNINCLFQHCIQALEHPIRVVNALQTLCALIRGVHQKNKSTSGFD-DKAELCMKNLMESLDSLLCAEGSESLKSLCLKLLLCLVTVT.......................... 146
7 -5.560tr|F5H085|F5H085_HUMAN Uncharacterized protein OS=Homo sapiens GN=CABIN1 PE=4 SV=1  ali   12  3........................................RRSRRGIWRIPV-DEIDRPGSFAWHMNRSIVLLLKVLAQLRDHSTLLKVSSMLQRTDQGKKYLRDADRQVLAQRAFILTVKVLEDTL............................................. 89
8 -5.560tr|B5MEB3|B5MEB3_HUMAN Calcineurin binding protein 1, isoform CRA_c OS=Homo sapiens GN=CABIN1 PE=4 SV=1  ali   12  3........................................RRSRRGIWRIPV-DEIDRPGSFAWHMNRSIVLLLKVLAQLRDHSTLLKVSSMLQRTDQGKKYLRDADRQVLAQRAFILTVKVLEDTL............................................. 89
9 -5.530sp|Q5TIA1|MEI1_HUMAN Meiosis inhibitor protein 1 OS=Homo sapiens GN=MEI1 PE=2 SV=2  ali   10  27.......VRSLQGSLKMNNIELHKQGLLLFAEILTRQPEEIKLFTSSAMCRDAGRALQEA-VSSPVLEVAAEALKATSAF------------LRKDHQSTPPVQYGELQALLEA.......................................................... 120
10 -5.490sp|Q6ZMJ4|IL34_HUMAN Interleukin-34 OS=Homo sapiens GN=IL34 PE=1 SV=1  ali   15  66......SERELRYLWVLVSLSATE---SVQDVLLEGHP--------------------SWKYLQEVETLLLNVQQGLTDVEVSPKVESVLSLLNAPGPNLKLVRP---KALLDNCFRVMELLYCSCCKQSSVLNWQD................................... 170

FFAS is supported by the NIH grant R01-GM087218-01
1 3 2 7 8 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Li Z, Li W, Godzik A. FFAS03: a server for profile--profile sequence alignments. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W284-8.