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Query: d3d1kb_ a.1.1.2 (B:) Hemoglobin, beta-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]}, from SCOP207

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst VEWTDKERSIISDIFSHMDYDDIGPKALSRCLVVYPWTQRYFSGFGNLYNAEGIMSNANVAAHGIKVLHGLDRGMKNMDNIADAYTDLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFTAETQGAFQKFLAAVVSALGKQYHLast
1 -7.270sp|Q5T2E6|CJ076_HUMAN UPF0668 protein C10orf76 OS=Homo sapiens GN=C10orf76 PE=2 SV=1  ali   10  1.......VLMYDEIFMTEDPSKCSPRFWEELFLMKVNLEYLEGKLESLDGEELMKIKDNINCLFQHCIQALGEVVNALQTLCALIRGVHQKNKSTSGFD-DKAELCMKNLMESLDSLLCAEGSESLKSLCLKLLLCLVTVTDNISQ 151
2 -5.970tr|Q5T2E7|Q5T2E7_HUMAN Novel protein OS=Homo sapiens GN=RP11-190J1.9 PE=2 SV=1  ali   1.......VLMYDEIFMTEDPSKCSPRFWEELFLMKVNLEYLEGKLESLDGEELMKIKDNINCLFQHCIQALGEVVNALQTLCALIRGVHQKNKSTSGFD-DKAELCMKVRHKLQMCLWMAASDSCSWTLSADKCTQRFGL...... 145
3 -5.800sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2  ali   11  3.........LIQMLWDNMKLHQDPGQPLYILWNAHTQKYPMVHLL-----------QKSDNSFNQELLKSMVKSIKM-NDVYGPMSQILETLNKCPHFK-RQRSLYREILFLSLVAL--DAFDKEYKMAYDRLTPSQVKSTHN... 128
4 -5.630sp|Q9NSG2|CA112_HUMAN Uncharacterized protein C1orf112 OS=Homo sapiens GN=C1orf112 PE=1 SV=1  ali   10  4...............PHMNHLTLEQTFFSQVL---PKTVKLFDDMMYELTSQARGLSSQNLEIQTTLRNILQTMVQLLGALTGCVQHICATQES---IILENIQSLPSSVLHIIKSTF--VHCKNSESVYSGCLHLVSDLLQALFK 126
5 -5.350sp|Q5VZ89|DEN4C_HUMAN DENN domain-containing protein 4C OS=Homo sapiens GN=DENND4C PE=1 SV=2  ali   10  79...QDSKLVYIQLLWDNINLHQ-------------EPREPLYVSWRNFNSEKKSSLLSEEQQETSTLVETIRQSIQH-NNVLKPINLLSQQMKPGMKRQRSLYREILFLSLVSLGRE--EAFDNEYGIAYNSLSSEILERLQK... 206
6 -5.200sp|Q9Y2D4|EXC6B_HUMAN Exocyst complex component 6B OS=Homo sapiens GN=EXOC6B PE=1 SV=3  ali   13  30........................................................RKQRRKQARLVLQPPSNMHETLDGYRKYFNQIVG------------FFVVEDHILHTTQGLVNRA---YIDELWEMALSKTIAALRTHSS 104
7 -5.170sp|Q7Z2Y8|GVIN1_HUMAN Interferon-induced very large GTPase 1 OS=Homo sapiens GN=GVINP1 PE=2 SV=2  ali   10  52...PEEQLKKLINFMKMLSQKLKSYDTWINICLTD-SLQNFLVNTINFCKKSSIYKTKCIKSHLRSLLDPHIYRVTNFPQAHFIMQWIFQSDSEQEQVNISQFSQLIEILKET................................. 160
8 -5.100sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3  ali   12  31...RQHQPPTLDLLFELLRDKTPGPGFGIYAVVLLPVMSVWLRR-SHKDHSYWDMASANFKHAIGLSCELVVEHIQSFSMINTMLKDLFELLVACVAKPTETISRVGCSCIRYVLVTAGPVFTEEM---WRLACCALQDAFSATL. 180
9 -5.090sp|Q13315|ATM_HUMAN Serine-protein kinase ATM OS=Homo sapiens GN=ATM PE=1 SV=3  ali   11  41.....................................NSKFLDFFSKAIQCARQEKSSSGLNHILAALTIFLKTLELGDEILPTLLYIWTQHRLNDSLKEVIIELFQLQIIHHPKGAKTQEKGAYESTKWRSILYNLYDLLVNEIS 159
10 -5.050sp|Q96E40|CI009_HUMAN Uncharacterized protein C9orf9 OS=Homo sapiens GN=C9orf9 PE=2 SV=1  ali   1MNEVKESLRSIEQKYKLFQQQQL--TFTAALEHCRENAHDKIRPISSIGQVQSYMEHYCNSSTDRRVLLMFLDICSELNKLCQHFEAVHSGTPVTNNLLEKCKTLVSQS-LSSLRAKYPHD-CDEARNHYGGVVSLIPLIL..... 145

FFAS is supported by the NIH grant R01-GM087218-01
1 3 2 7 8 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Li Z, Li W, Godzik A. FFAS03: a server for profile--profile sequence alignments. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W284-8.