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Query: d4i0va_ a.1.1.1 (A:) automated matches {Synechococcus sp. [TaxId: 32049]}, from SCOP207

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ASLYEKLGGAAAVDLAVEKFYGKVLADERVNRFFVNTDMAKQKQHQKDFMTYAFGGTDRFPGRSMRAAHQDLVENAGLTDVHFDAIAENLVLTLQELNVSQDLIDEVVTIVGSVQHRNDVLNRLast
1 -58.100PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin  ali follow..  17  1.TLYEAIGGDATVRALTRRFYELMDTLPEAARCRAPADLSGSEAKFYDYLTGYLGGPPVYVEKHGHPMLRRRHFVAPIGPAERDEWLLCFRRAMDETIENAKLREIIWAPVERLAF--HMQN. 121
2 -9.940PF11563.8; F0XJU9_GROCL/20-199; Protoglobin  ali follow..  12  30.........KVLIPAVTNIVYRKLLQYDITARAFETRSILHRKMFLRAYLARLCSDPSQMTFWEYLDKVGMMHVGLGRAHPHIGATLSLIQDVLTEA--MGRKMGLVKALGKVIWIQNDLFAK 172
3 -8.150PF02211.15; Q2K6I5_RHIEC/1-218; Nitrile hydratase beta subunit  ali follow..  11  7......LGGQMGFGPVAPEKDEPCFHADWEKRALG--------------ITLSCGAFGAWTIDESRHARENIPPADYLAASYYEIWIRGVETLLARHGF---TREELLSGHKLQDGAAP.... 103
4 -7.510PF06648.11; Q287H1_NPVAS/7-128; Protein of unknown function (DUF1160 topsan)  ali follow..  37..........HKFTQIIKMFIRREISVQDVCDILDAANGIKLTHGQIEYFCSQV-----YYNSHIIHILRSFINFQHLNDEEISDLSQFLVKEIDNAIM........................ 120
5 -6.710PF14619.6; M0T3J0_MUSAM/205-294; Snf2-ATP coupling, chromatin remodelling complex  ali follow..  13  8.AAWQRLIQGSTDGLNPLAMPSRLVTDEDLKPFYKAMMIHESPNVSMKRKSEYLGGLDTQQYGRGKRAREVRSYGDQWTEEEFE....................................... 90
6 -6.320PF02881.19; A1SZY9_PSYIN/5-82; SRP54-type protein, helical bundle domain  ali follow..  11  2.............................................................TERLSKTLKNVSGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFIEAIKTRSVGQDVAK. 62
7 -6.150PF02444.16; ORF3_HEVCH/1-114; Hepatitis E virus ORF-2 (Putative capsid protein)  ali follow..  14  29SRLAAAVGGAAAVPAVVSGVTGLILS-PSQSPIFIQPTPSPPMSPLRPGLDLVFANPPDHSAPLGVTRPSAPPLPHVVDLPQL........................................ 110
8 -6.140PF18137.1; A0A137QR21_9AGAR/477-667; Origin recognition complex winged helix C-terminal  ali follow..  12  72.TRYLDSGKLINIHDWYESFRVCLDAQRAERLSLKTRSKSKSKGKGKGKAKSTAKKKIKAEKAEEGGEELDMKGEEYEEPDE-QEVQARFMRALHEL--------DYLGFVKHTGRRVEHVVR 188
9 -5.660PF05712.13; B0DA97_LACBS/130-312; MRG  ali follow..  11  43.....SLPRSPTVAEILTSFSDHVLKTKPPHIREPGLVLPTILSGLQCYFDRALGANLLYRFERPQVAGQEKEMSQIYGAEHLLRMLVSLPNMIASSSLDAESVHLVRDYVSEL......... 165
10 -5.610PF07128.12; Q7ARC0_YERPE/25-161; Protein of unknown function (DUF1380 topsan)  ali follow..  13  10RLLREQYPAETPLNLIV--------SPADIEALADGMEYAVSEQDTRAVLARM------------DAIPEEQQLESGVSAGAVMDLIEQVKEAVPAVMVPADLLETLLTTAEQALWHRE.... 109

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Topczewski J, Godzik A., Paszewski A. The Aspergillus nidulans cysA gene encodes a novel type of serine O-acetyltransferase which is homologous to homoserine O-acetyltransferases. Microbiology. 2000 Oct;146 ( Pt 10):2695-703.