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Query: [F] COG0005 Purine nucleoside phosphorylase, from VFDB

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKDRIERAAAFIKQNLPESPKIGLILGSGLGILADEIENPVKLKYEDIPEFPVSTVEGHAGQLVLGTLEGVSVIAMQGRFHFYEGYSMEKVTFPVRVMKALGVEALIVTNAAGGVNTEFRAGDLMIITDHINFMGTNPLIGPNEADFGARFPDMSSAYDKDLSSLAEKIAKDLNIPIQKGVYTAVTGPSYETPAEVRFLRTMGSDAVGMSTVPEVIVANHAGMRVLGISCISNAAAGILDQPLSHDEVMEVTEKVKAGFLKLVKAIVAQYELast
1 -5.450sp|Q8IYM0|F186B_HUMAN Protein FAM186B OS=Homo sapiens GN=FAM186B PE=2 SV=2 (Range: 199-316)  ali follow..  15  4.......................................................................................................................................................................QHTMNTKASEVTSMLQELLDSTMFSKGEVRAIRYMATVVENLNKALILQHKENRSLETKYRHLQMQATKELSSQRLHFQQFMEVLESRRDALLKQVEILGGRYH 107
2 -5.070sp|Q9C086|IN80B_HUMAN INO80 complex subunit B OS=Homo sapiens GN=INO80B PE=1 SV=2 (Range: 53-138)  ali follow..  20  5.........................................................................................................................................................................................AGPTQPSPAQLKLKIKLGGQVLGTKSVPTFTVIPEGPRSPSPLMVVDNEEEPMEGVPLEQ.......................... 66
3 -4.430sp|Q9H501|ESF1_HUMAN ESF1 homolog OS=Homo sapiens GN=ESF1 PE=1 SV=1 (Range: 423-539)  ali follow..  4.............................................................................................................................................................YQFKRLKYYYAVVDCDSPETASKIYEDCDGLEFESSC----------SFIDLRFIPDDITFDDEPKDVASEVNLTAYKKYFTSAAMGTSTVEITWDETDHERITMLNRKFKKEE 108
4 -4.410sp|Q8TDY2|RBCC1_HUMAN RB1-inducible coiled-coil protein 1 OS=Homo sapiens GN=RB1CC1 PE=1 SV=3 (Range: 676-801)  ali follow..  10  2..................................................................................................................................................................................QDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEENLSSPNPISDPQSPEMMVESLYSSVINAID 98
5 -4.380sp|Q8IUW3|SPA2L_HUMAN Spermatogenesis-associated protein 2-like protein OS=Homo sapiens GN=SPATA2L PE=2 SV=1 (Range: 92-197)  ali follow..  14  9..............................................................................................................................................................................IKTFSGGYVHVLKGVLSDDLLLKSFQKMGYVRRDSHRL--VQVALGCFALRLECEILGEVLAQLGTSVLPAEELLQARRASGDVASCV......... 105
6 -4.130sp|Q7Z5Y7|KCD20_HUMAN BTB/POZ domain-containing protein KCTD20 OS=Homo sapiens GN=KCTD20 PE=1 SV=1 (Range: 339-419)  ali follow..  22  2..................................................................................................................................................................................EVIYNYVQRP-----------------FIQMSWEKEEGKSRHVDFQCVRSKSLTNLVAAGDD............................... 46
7 -4.110tr|Q5T191|Q5T191_HUMAN FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae) OS=Homo sapiens GN=FLAD1 PE=2 SV=1 (Range: 1-138)  ali follow..  23..............................................................................................................................................................EASIAPILAEAQAHFGRRLGLGSY-----PDWGSNYYQVKLTLDSEEEGPLEECLAYLTARLPQGSLVPYMPNAVEQASEAVYKLAESGNYLMFQTPSRSCISAASPLSLSWN 130
8 -3.980sp|Q52LD8|RFTN2_HUMAN Raftlin-2 OS=Homo sapiens GN=RFTN2 PE=1 SV=3 (Range: 246-401)  ali follow..  10  14.....................................................................................WAYQEGILSMKVTRKGSVISTLDADWLELTTFYYKQG-LSLIDSFVFWETSKGEHLPKSLEGFFIYEEEGSGVPGSSRKGNDAIVVEQ--------WTVIEGCEIKTDYGLHTLAEFGWLLTSVLPTPVLRHDSEGNLATKQIVFLQR...................................... 154
9 -3.860sp|Q53EP0|FND3B_HUMAN Fibronectin type III domain-containing protein 3B OS=Homo sapiens GN=FNDC3B PE=1 SV=2 (Range: 1-129)  ali follow..  16  1............................................................................................................................MYVTMMMTDQIPLELPPLLNGEVAMMPHLVNGDAAQQVILVQVNPGETFTIRAEDGTLQCIQGP-----AEVPMMSPNGS--VPPGYISQVIEDSTGVRRVVVTP.......................................... 103
10 -3.860sp|P01266|THYG_HUMAN Thyroglobulin OS=Homo sapiens GN=TG PE=1 SV=5 (Range: 1695-1822)  ali follow..  1.......................................................................................................................................................TGFQNMLSGLYNPIVFSAS---GANLTDAHLFCLLACDRDLCCDGFVLTQVGAIICGLLSSPSVLLCNVKDWMDPSEAWANATCPGVTYDQESHQVILRLGDQEFIKSLTPLEGTQDTF. 118

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 9 1 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Database searching by flexible protein structure alignment. Protein Sci. 2004 Jul;13(7):1841-50.