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Query: [R] KOG0286 G-protein beta subunit, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGEMEQLRQEAEQLKKQIADARKACADVTLAELVSGLEVVGRVQMRTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKSERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWNLast
1 -95.200[R] KOG0286 G-protein beta subunit  ali  100  1MGEMEQLRQEAEQLKKQIADARKACADVTLAELVSGLEVVGRVQMRTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKSERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
2 -76.900[S] KOG0271 Notchless-like WD40 repeat-containing protein  ali follow..  22  91VRPVTRCSASIPGHGEPVISAQFSPDGRGLASGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIKTLKRHKQWITSLAWQPTCRLLASCGKDGNIFIWDTVQGT----VVRCLSGHTASVTCLRWGGEGLIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDGERLVSGSDDFTLFMWNPETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHV--GPVYQVAWSADSRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLWR 472
3 -76.700[S] KOG0295 WD40 repeat-containing protein  ali follow..  18  51.KKWTTVLRLQRKVNDLESKLQESQREINHGAPDKRQAADWIPRPPETQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQT---YDCLKSLKGHEHTVSSVTFLPTGDVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAILFSGSRDRSIKAWNINTGDVLFTLLAHE--NWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
4 -75.500[A] KOG0265 U5 snRNP-specific protein-like factor and related proteins  ali follow..  18  6..PNNSVILAQEAKRSKNDLMAYTNRDKALLESGVR----TSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQ----RQRRFKGHGNFVNSVQGSRRGQLCSGSDDRTIKIWDARKKHAAHTLESP-FQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRGERCVKVFQGHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGE 344
5 -75.000[D] KOG0642 Cell-cycle nuclear protein, contains WD-40 repeats  ali follow..  14  380.PSSSRLPEHEINRADEVEALTFPPSSGKSFIMDALRKTWNP-----KFTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNDPSVLRGPLLGHTDAVWGLAYSAAHQLLSCSADGTLRLWNTTEVAPALSVKELGIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLENSSCQINRVISHPTLSISITAHEDRHIKFYDNNTGKLIHSMVAHL--EAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHEESIHDVAFHPSKCYIASAGADALAKVF. 779
6 -74.700[B] KOG0273 Beta-transducin family (WD-40 repeat) protein  ali follow..  17  165VEIPPNKATVLRGHESEVFICAWNPVSDLLASGDSTARIWNLNENREGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTE-NGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGE----AKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPMLASASFDSTVRLWDVEQGVCTHTLMKHQ--EPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGG-IFEVCWNARGDKVGASASDGSVCVLD 521
7 -73.500[K] KOG0263 Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA)  ali follow..  19  311.SLPSVCMYTFHHTNNNMNCAEFSPDSTMIACGESYIRLWSIKDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHI----YPLRVFAGHLSDVDCVTFHPNSAVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPVSSSL--TGSVVTPFSAKTSTFNE--------VNWSTSPDQMVALYTKQTPIFNVSFTRRNLCLAISV......... 642
8 -72.500[U] KOG0276 Vesicle coat complex COPI, beta` subunit  ali follow..  15  1MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW---ACTQIFEGHSHYVMQVTFNPKDTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL--ERVWAIGYIKSSRRVVIGYDEGTIMVK-LGREIPVASMDNTGKIIWAKHNEIQTANIKSIGADYEVTDGE 340
9 -71.600[T] KOG0279 G protein beta subunit-like protein  ali follow..  21  1MAEGLVLKGTMCAHTDMVTAIATPVDNSDVSSRDKSIILWKLSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECK--YTISEADGHKEWVSCVRFSPNTLIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG-SIIHSLCFSPNRYWLCAAT-ENSIRIWDLESKSVVEDLKVD-----LKAEAEKTDGSTGIG--------------------NKTKVIYCTSLNWSADGNTLFSGYTDGVIRVWG 322
10 -70.700[S] KOG0282 mRNA splicing factor  ali follow..  17  235..GEEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSTMPP--YLPKKQIHVWSGHTKGVSAVRLFPLGHLLLSCSMDCKIKLWEVYGRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRF-----TNRKVPYCVKFNPDEDFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPETSKVITCGWDGLIKLWD 579
11 -70.700[A] KOG0285 Pleiotropic regulator 1  ali follow..  19  105.PTLPPRDLNNTGNPGKSTAILPAPGSFTAALMERMPSRWPRAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQN----KVIRSYHGHLHGVYCLALHPTLDVLTGGRDSVCRVWDIRTKMQIFVL-PHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKKFSLPKGEFCHNMLSLQR--DIINAVAVNEDGV-MVTGGDKGGLWFWDWKSGHNFQRAETSEAGIYAACYDQTGSRLVTCEGDKTIKMWK 454
12 -70.600[A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA processing complex  ali follow..  16  337.LPDVNMIHSLSISDYPISAALFNCTGDWVALAIGQLLVWEWQSEQYIMKQQGHSSEMTCIAYSSDGQFIATGGEDSKVKLWNTQSSFCFVTFSEHTSGVTGIQFSRNKKFLVSSSLDGTVRAFDVNRYR---NFRTFTSPNPAQFSCVAVDYSGELVVAGGVFDIFLWSVKTGKLLEIISGHEGPVVSIAFSPTSSTLVSGSWDKTVKIWNCLESNSEHETIDAVSDVTNVTFSPSGEEIAVATLSGNITIFDIKSAGQVTTIEGRAQANYFSTIEYSADGECILAAGKSANICIYHVREAILLKKFEQQEVRVFSVKFSPTGQAFAAAGTEGLCIYA. 752
13 -70.500[S] KOG0296 Angio-associated migratory cell protein (contains WD40 repeats)  ali follow..  17  48.MVMDMSVQGFFEHKDSVFSVSINPVHSNLCASDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGFEFITAFETVDEIVWLSWHPKGLFLAAGCNDGSIWMWSLPSGK----VVQVMYGHTAPVNAGKFIPPGVLATVDDSGTLIVWNPATGAPECRMSETAAGWTSFDCNAEGNVLFLGGSSGKVKVVNINSSHILASLEAQTESVEAIALCTALPICACASVDGTVALYDSASLKFRKSL---PHEQAVIDCKFLPNTPYLLTACADCVIRKWDVRSGQLLGEYTGHQEPILCMAITPDGKRVVTGSDDTELLVFD 396
14 -70.400[S] KOG0316 Conserved WD40 repeat-containing protein  ali follow..  16  1....................................MSATEL-PTKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGR----VIRKFRGHDGEVNAVKFNDSSSVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLGQP--VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDL-VNSIDVDFYLRKFFVAGDKRELPPEG 299
15 -69.800[JT] KOG0643 Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)  ali follow..  17  5.................................................LLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALL-----KTNSAVRTCGFDFGGNIIMFSTDKFVSFFDLDNNEPYMKIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAKSGEVLVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTF---RTERPVNSAALSPNYDHVVLGGGQEAARFFHLAFEEEFGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRIHY 313
16 -69.400[S] KOG0308 Conserved WD40 repeat-containing protein  ali follow..  16  16.ISFIIRDEHEYSNRSAVSALQYDAQNGRLFTGDTIIRTWSVPHHKDQGSLEQHTDWVNDMILCGHGKILISASNDTTVKVWNIERDNKIDCIRTHKDYVSCLAYAPIVEKAVSASFDHNIFVYDINANF---KTVNNLIGCKDSIYSLATTPNLSVLGAGTEKCIRLFDPRTNEKIMKLRGHTDNVRALVVNDDGTRALSAGSDATIRLWDIGQQRCIATCIAHEEGVWTLQVDSSFTTVYSAGKDKMVVKTPLYDFTKSQLLFKEE--APVKKLLLSEKDNSLWVGTWKSDIKRWSIRPSAQLSIGGDEDGAIKKHAMLSDKRHVLTRDSDGNVALYD 419
17 -69.400[A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA processing complex  ali follow..  15  263.IETAKLVRKKRIASSNLDHLAYDVVSNRFLAIEQNLIILDFENLKIARQIVGHDEIYSCCLLGKDESHMAVASNTSEIRLYNTKTLDCQLIRGHTESVLSVVSPTWDTSLLASCSKDNSIIFWRLVTSPSTLVPVAAATGHANTVTALAISNTGRLASVSTDCTIKLWGLGKLTCSSTMVAHGKDVNCVDISESDALIATGGMDKLVKLWQVDTHKIAGTLSGHRRGVGDVKFAKNSHKLASCSGDMTIKIWNISEKSCLQTISGHS--CAVFRVIFARNDSQLISADSAGIIKIWTIKTADCECSIDAHTDKIWSLSKNHNESEFVTAGTDGRIVVWK 635
18 -69.000[R] KOG0288 WD40 repeat protein TipD  ali follow..  17  175.EANDLYEEMLAKLKANGLETLARQQVDGIVRRDGTDHFVETIPSTCANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSG----RVRHTLTGHTDKVCAVDVSKFSSVVSAAYDRTIKLWDLHKGYCTNTV-LFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRSNWSRSCISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCTWT 515
19 -68.900[A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA processing complex  ali follow..  19  350QDEIQRVTNIKTSAKIKSFDLIHSPHGEVFLLQNNLVELYSQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTM--TCEYALCSFFVPGDRQVVIGTKTGKLQLYDLASGN----LLETIDAHDGALWSMSLSPDQRFVTGGADKSVKFWDFELVKDENSTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHD--DSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
20 -68.500[B] KOG0639 Transducin-like enhancer of split protein (contains WD40 repeats)  ali follow..  17  429.VPTIPPNLAGIPGGKPAYSFHVTADGQMQPVPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP--RIKAELTSSAPACYALAISPDSKCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL---HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 767
21 -68.000[A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1  ali follow..  16  61MQTLSDKDKTNSDDVLPGIDLEFEPEASALAPEP---------HSYETAYVTSHKQACRAGAFSCDGSLVATGSVDASIKILDVERMPVIRTLYDHTDEVSYLEFHPKEHILASASRDGTVKLFDIAKPS--VKKAHKVFTDCEPVLCLSFHPTGDVAIGTEHNVLRVYDVATTQCFVSAQQHKAGVTCVKYSPTGKLYATGSYDGDIKIWDGISGRCINTIAEAHGGICSLEFTRNGKYLLSSGMDSLVYLWELCTSRPIQTYTGAGQEHQTEAVFNHTEDYVLFPDEATTSLCSWNSRNGCRLTNSLGHNGPVRYITHSPNGPAFLTCSDDFRARFWY 418
22 -67.900[Z] KOG0318 WD40 repeat stress protein/actin interacting protein  ali follow..  16  9YENKNIYATLPRTQRGQPIVLGADPKGKNFLYTGNSVIIRNIENPAIADVYTEHSCAVNVAKYSPSGFYIASGDASGKIRIWDTVNKEHLNEFQPIAGPIKDISWSPDNQRIVAVGEGRFGHVFMSETGT----SVGEISGQSKSINSADFRPARPIVTGSEDNTIAVFEGPPFKFKMTKQDHSRFVQAVRYSPDGKFFASAGFDGKVFLYDGTSSELVGEFPAHKGGVYALAWKPDSTQLLTCSGDKTCRLWTVESRELVSEFV-MGTTVDDQQVSCLWQGDNLITVSLSGVITYLNVADSKPLRVVKGHNKPITVLGLSDDRSTIYTGSHDGVVTNWN 353
23 -66.400[R] KOG0645 WD40 repeat protein  ali follow..  19  1...................................................SGHTGRLWSVAAHPMLPLFATSSQDKSVRIYNSNTYNLVHVIDGHTRSIRRVAWRPIERVLAVASFDSVVSINEKIDDD--WECTAALEGHENEVKCIAWSCNGNLATCSRDKSVWIWEATEDDCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICFWDGDDWALTCQLQGHTNTVWALAFSPNGNTLASADNDGNVFLWIKISSNEDVATIDSIHKGAVYTISWMNDAT-LCSAGGDGKIVVYQREKHDEEQDHAHGVYEINSLEYLRDDR-LLSGGDDGECRVWS 320
24 -66.100[ABO] KOG1446 Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2  ali follow..  19  2...................................KIKLIDVRSFKVAKIFRENTDKINAIDFAPNGEHLISCSEDDQIVIYDCEKGTQSRTVNSKKYGVDLIHFTHANNTASSTKVDDTIRYLSLHDN----KYLRYFPGHTKKVISLCISPVEDFLSGSLDKTLRLWDLRSPNCQGLM--HLSGRPIAAYDPEGLIFAAGVNSESIKLYDLRSFDTFKLNQEKECDWTGLKFSRDGKTILISTNGSVIRLVDAFHGTPLQTFTGYNNKGIPIEASFSPDSQFIFSGSTDGRVHIWNADTGNKVSVLNGHPGPVQCVQFNPKYMMLASACTNMAFWLPT 312
25 -66.000[R] KOG0315 G-protein beta subunit-like protein (contains WD40 repeats)  ali follow..  11  23.AHTGNCIKTMRVETSQVNALDRTPDKTRLAACGQCIRLYDLESNCPVINFDGVQKNVTRLGFQEDGNWMFTAGEDHHVRIWDMIAAPPHSRIFDCEAPVNAACLHPNQVEIAMGSQNGSVFLWDVKSE----RHERIVPEVDASIQDVAISPDGRLAAANNKGNCYIWSLTSQRPNRKIPAHSRYILRCKFSPDSRLLLTTSGDGTVCIWKTDDFSKWRELCIENYWVWDAAFSADSKWLFTASSDGIARLWKLQTKSSIRDYTGHT--KAITALSFKDEIPVKSTNISDVQSSAKPPT------QRDNPPGTNNLAFFETVGRVAMNPYMGNTTTELN 362
26 -65.700[S] KOG0772 Uncharacterized conserved protein, contains WD40 repeat  ali follow..  14  67MPDLPPGFQMQQSEAGPSSSRAEGPEDSDDSDFTEAISIIKLIPAACEAKISHGTQAISALRVEPPGVRFASGGLDYYVKLFDFQKMDMSELLPAESHVINSLAFSPNGETLVVASGEAIIRLLDRAGGDQYIIDLNITKGHTATVNCVEFNPLNKFISCSDDGSLRLWNLDDHKVIKGANGKRVSPQVCTFSPDGKWIAAGCDDGSVQAWKYGSQYVYLVRKAHNGSITSIAFSPDSKRLLSRGFDDTLKMWSLDNPKELLVKTGLENAFKSTDCGFSPRAEVVFTGDTPGTLQFFDPMTFDLVYKIDYPGISCHRIQWHPRLNQIIAGLSDGTIHVYY 446
27 -65.600[S] KOG1407 WD40 repeat protein  ali follow..  15  3.................................ETTIPFKSLHS----REYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIESKAKDLELKGHTDSVDQLCWDPKHSLVATASGDKSVRLWDARSGKCTQQV-----ELSGENINITYKPDGTVAVGNRDDELTILDVRKFKPLHRR-KFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLE--WPVRTISFNYSGEYIASASEDLFIDIANVQTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGDDKNPKYNT 302
28 -65.600[D] KOG0267 Microtubule severing protein katanin p80 subunit B (contains WD40 repeats)  ali follow..  16  2.........SLCGHTSPVDSVAFNSEEVLVLAGSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAG----KLLHEFKCHEGPIRSLDFHPLEFLLATGSDRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDG-LKVYSWEPVICRDGVDMGWSTLGDF-CINEGKFIGCSYYRNSVGIWVSDISEPYGAVSEDKNECMVKRFSVLNDQSERMGSGPRGSV------------SPDYETREIKNIYVDSTGGNLNVAQNPGSLKATL 319
29 -65.400[R] KOG0289 mRNA splicing factor  ali follow..  18  124VTAAREALATLKPQAGLIVPQAVPSSQPSVVGAPMDLGELVGMTPEIIQKLSASIPGILALDLCPDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNAS----CVQVVRAHESAVTGLSLHATGDLLSSSDDQYWAFSDIQTGRVLTKVTTSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQL-DNNFEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYS 503
30 -65.200[S] KOG0293 WD40 repeat-containing protein  ali follow..  16  230...........NSLHIQRDSCVFHNTLDSDLSLDHQCGKHQI-PSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADSLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGD----CVHMYEKGGISPISCGWYPDGQIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATV--ERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKISRYKGHKRSRIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLMLASASDDGTIRIWG 560
31 -65.200[J] KOG0650 WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis  ali follow..  15  384LREVPAYSRYLRERFLRCLDLYLCPRAKRVKLNAEYLIPKLPSPTVESMVYRGHTDLVRSVSVEPKGEYLVSGSDDKTVKIWEIATGRCIRTI-ETDEVVRCVAWCPNPKSIIAVATGNRLLLVNPKVGDEQEKGVRVVITHFKPIRQVTWHGRGDYLATVMPESALIHQLSKRRSQIPFSKSKGLIQFVLFHPVKPCFFVAT-QHNIRIYDLVKQELVKKLLTNSKWISGMSIHPKGDNLLVSTYDKKMLWFDLDSTKPYQTMRLHR--NAVRSVAFHLRYPLFASGSDDQAVIVSHGMVYNPLKKLQTHEFGVLDVNWHPVQPWVFSTGADSTIRLYT 784
32 -64.000[A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats)  ali follow..  22  205..RIARLWLADYSLPRAKDRLVRAREALEVPSAARAEMQKKLQSLAPLCSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKAMASGGHDGAVKLWGFNNEE----SIADITGHPHRVSKVAFHPSGRLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHT--NLISDVKYQQEGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLWS 550
33 -63.600[S] KOG0283 WD40 repeat-containing protein  ali follow..  17  342.GVAHSMSLRVADKDVSDGSTDSPKKGKDHKHGNEWVKVRELSALHMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGSLTPIHPSLCDSSGNEITVVEKKKKGKGSSGRRHNHSDKPVCSLKGHLDAILDLSWSKSQLLLSSSMDKTVRLWDIETKTCLKLF-AHNDYVTCIQFSPDENYFLSGSLDAKIRIWSIQDRH-VVEWSDLHEMVTAACYTPDGQGALIGSHKGICRAYDTEDCKLSQTNQIDQAKRKITSFQFSPVNPEVLVTSADSRIRILDGSEVIHKFKGFRNTCSQLSASYSQDGKYIICASEDSQVYLWK 710
34 -63.500[R] KOG2096 WD40 repeat protein  ali follow..  18  2...................DSVLVVGIASVILGIAVLFFGSYFRKRTSEVQSMAKAEPQDPIRNPKSNHPAPKKNHPKSQASDKNQNKRLNTLKGHGDAVTGLCFSSDGKSLATACADGVIRVFKLDDASLKFRFLRINLPAGGHPTAVAFADDASIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVKVWEIVYQKRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNINVRYHLDECDSGGNPLHYDRLSLCPEGKILAASH-GSTLQWLCAETGNVLDTAKAHEGDITCISWAPKAMVLGTSGDDKKVKLWE 447
35 -63.300[A] KOG1272 WD40-repeat-containing subunit of the 18S rRNA processing complex  ali follow..  12  24.WTLIQICMQESDVELETKVKKYLRGEGANLETDKKLKTQLASREKLYGKSAKAAAKIEKWLLPAEAGYLETEGLEKTWRVKDILSSRNQYDIVLPDFGPYKLDFTASGRHMLAGGRKGHLALLDMMNMSLIKEIELHCLKERGPVARLRFLKNHFLLASNMSGQLHYQDVTHGGMVASIRTGKGRTDVMEVNPYNSVVGLGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI----HSFHAKTLSFSQKGLLAAGTGSF--VQILGDSSGGSSHNSMVKGYQIEKVMFRPYEDVIGIGHSMGWSSILI 408
36 -63.300[R] KOG1539 WD repeat protein  ali follow..  16  176..NTKKMLYQFKGWGSSVTSCVSSPALDVVAIGDGKIHVHNIKLDEEIVTFEASRGAVTALSFSTDGRLLASGGSFGVISIWNLNKKRLQSVIDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRILSAGQDRAFRLFSVIQEQQSRELNHLLLAILACAISACGNFAVVGTAGGWIERFNLQSGISRGSYYAHDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGC---SLVKIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWD 606
37 -62.700[BK] KOG1063 RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily  ali follow..  16  6.KVEAKRVFIGAGCNRVVNNVSWGASGLVSFGAQNAVAVFCPKTAQILTTLPGHKASVNCTHWLPTSKYLLSGDSDGIIILWELSTLNVLQLPLSHKKGVTCIMVSETDAMFASASSDGVVNVWDVSFPSQKVVCLDSICVDTKAIVTLSLNPGRFALALGGDNKIKLYSGERTTSVCELKGHTDWIRSLDFSLPLHMLVSSSQDKVIRIWKLVLVSVESVLIGHEDWVYSVEWQPPVISILSASMDKTMMIWRPEKKTGVWV-ELSHCALGFYGGHWSPNSLSILAHGYGGAFHLWRNVSSQMQKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVFS 443
38 -62.400[T] KOG4378 Nuclear protein COP1  ali follow..  13  1.................MMSNLVEPSWRLLAASGDTVKLFDVSADSVLSYTPSPGCAVNSVKWNHTNLVVASTGEDKKISLWRKNGQSLGTGGDSAEECLSAISFSKKGRYICSGGTGQIVKIWDLQRK----LCIKKLKGHTSTITGVMYNCKDELASVSVGGDLIVHNLASGARATELKDPNGQLRLLDYSRSSRLLVTAGDDGTVHLWDTTGRSPKMSLKQHSAPTAGVCFSPSNEIIASVGMDKKLYTYDSGSRRSSSCI---AYEAPFSSLAFGDNGYILVAGTSNGRVVFYDIRGKPQPVTVFSNSEDVTSLSWQTSKPVIVNEKNYTSEMAL. 342
39 -61.800[Z] KOG1523 Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC  ali follow..  14  1.......MSLHQFLLEPITCHAWNRDRTQIALSNHEVHIYKKNGSQKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFEAENDWWVSKHIKKPIRSTVLSLDWHPNNVLAAGSCDFKCRVFSAYIKESEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGH-DCCPMLFIYDDRGCLTFVSKLD--IPKQSIQRNMSAMERFRNMDK-----RATTEDRNTALETLHQNSITQVSIKQDCRKFCTTGIDGAMTIWD 356
40 -61.600[S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb proteins  ali follow..  18  193.RHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIAVWDMASAT-DITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYIS................... 507
41 -61.500[S] KOG1409 Uncharacterized conserved protein, contains WD40 repeats and FYVE domains  ali follow..  10  18.GAKPALLHRITGHVARINDVILLSKDEGVWTADRSVRLYLKRDNDQFWPSHFMPVAPTSLYYSEETYKLLVGLINGNVYEFDFNSMTESRKWTCHAGPISGLGFALSSELIFSCSRDKSIVWHCSENS-------NKMGSYLLENSCTAMVIDLPVFVGDHGGHVTVLRIVDNQLVSKLSAHTNAITSLTWDGNKKVLYSGSSDHLIIMWDIGGGREAYELNGHNGKVTTLCAAPAAKRLFSADEHGKLMCWDMNCKRVETPEWKTSTCGSAVCGSCCDNWTTYPPMGYETKIRICNNFNLTPLAIPHEIHTGITAMHLQETLGLLVTSGQNRVIMIWD 403
42 -61.400[S] KOG0321 WD40 repeat-containing protein L2DTL  ali follow..  17  77.KPAQLCKELLIRQLGGSRSHPFSTKTSRHVGGRLNL---ETYYSRPSECLMMLNQLPFCLGFANNESLLAVCTETGALELFDSRSARRIHGWLAHNNAIFSVNFSKDDSLLATSSGDQTSKVFDLSTQQCITRLGRVDGYHSHSVKQVNFCNDSPLVSCSRDGSIIFWDMRTHGITHENSGRDCSITSATWLPQSTVISSCSANSALKLWDLRTVHTVRTTSKRDFGVTNVCTSPDGERIYAASRDSIIYEYSSRHLNSGFCKTYKRISSFYVKLACSPDGATLACGGKTSGVVVFDTTRNSSAMLTGGHTKDVTAVDWSSEGQ-LASISDDGSVRVWN 464
43 -61.300[S] KOG0310 Conserved WD40 repeat-containing protein  ali follow..  14  13.SRKQETILLDEDEPAVVSSVRISPKKPYHVATSVRLTLYDTVVCEPLNLFSRFKKGVCSIDFRHDGRLLAIGGDEGKVRIFDVESKVALRVMQASQSTVKSVHFSPRGDTVFSMADDGKIKQYRVADTAVNAVPIIEIQAHEDAIRCGAVSSINDVLTGGYDHKVRLWDIRSKEKSLEL-DCEHPVESVLFLPGEQLIATAA-GPIVKIWDTTTGRQLTALQAHYKTVTSLRLATNSTCLLSAGIDRRVNAFRTTNYSLINSW---SMPSPVLDIDVSRDDQTMAIGMGNLLALYRRAEIKKEATASAAIEDKRSLIRTSAPPVKLVEKDRDMQ..... 352
44 -61.100[A] KOG0268 Sof1-like rRNA processing protein (contains WD40 repeats)  ali follow..  15  6LSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPRNATKLERVFAKPFLASLDGHRDGVNCLAKHPEKLTVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTSFFTVGDDKTVKQWKMDGPG-YGDEEEPLHTILGKTVYTGIDHHWKAVFATCGQQVDIWDEQRTNPICSMTWGFDSISSVKFNPIETLLGSCASDRNIVLYDMRQATPLKKV-ILDMRTNTICWNPMEAIFTAANEDYNLYTFDMRALDTPVMV--MDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWK 353
45 -61.000[R] KOG2394 WD40 protein DMR-N9  ali follow..  12  121.SSRISGSFAASNSNTSMTNTNFDGKGTYLVFNVSDICDLNSQEKDPVKSIHFSNSNPMCHAFAKDGHDLLIGLNSGDVYTVSLRQQNKDGSVNNRQDRCTSISWVPSTFPAIRDPTQFSVDKAKYSKSN----PVARWHICQGSINSIAFSNDGALATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSNWSRFGSVGQDTQLLLWDLEMDEIVVPLRRAPHTEPLSGLMFTQES--VVTACREGHIKIWTRPSEQTNSSEANPTTALLSTSFTKDNKASLSSKIISGSTFKQ 556
46 -60.700[A] KOG0284 Polyadenylation factor I complex, subunit PFS2  ali follow..  16  120.ILTKFIRTAMNKVKCPVYSVCWSPEGKRLITGTGEFTLWNGTAFNFETILQAHDSAIRALKWASNEQWLLSADQGGYVKYWQPNMNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARY----TEERVLRGHGAEVRCIDWHPTKGLIATGSQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHELFVSGGGDGSIVYWMVDGEKEIGLLE-HAHDQAIWSMKWHPLGHILATGSNDNNTKFWARIFGLSNTNMIGHLDKEREPRMAPPKPSIETQETYRPDTFIP 468
47 -60.700[R] KOG4227 WD40 repeat protein  ali follow..  17  2.....KRRAGLGGSMRSVVGFLSQRGLHGDPLLDFQRRRLRGCRNLYKKDLLGHFGCVNAIEFSNNGQWLVSGGDDRRVLLWHMEQAKPIQLKGEHHSNIFCLAFNSGNTKVFSGGNDEQVILHDVESSE-----TLDVFAHEDAVYGLSVSPVNDFASSSDDGRVLIWDIRESPEPFCLANYPSAFHSVMFNPEPRLLATANSKEGVGLWDIRKPQLRYGGNLSLQSAMSVRFNSNGTQLLALRRRLPPVLYDIHSRLPVFQFQGYFNSCTMKSCCFAGDRQYILSGSDDFNLYMWRIPANGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWS 361
48 -60.300[U] KOG0277 Peroxisomal targeting signal type 2 receptor  ali follow..  21  2........................................SAVCGGAARMLRTPGRHGYAAEFSPLPGRLACATAQGTLLILDPEAGLRLFRSFDWNDGLFDVTWSENNEVLITCSGDGSLQLWDTAKAA---GPLQVYKEHAQEVYSVDWSQTRGVVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTIWSPIPGCFASASGDQTLRIWDVKAAGVRIVIPAHQAEILSCDWCKNENLLVTGAVDCSLRGWDLRNRQPVFELLGHT--YAIRRVKFSPHASVLASCSYDFTVRFWNFSKPSLLETVEHHTEFTCGLDFSLQSPQVADCSWDETIKIYD 315
49 -59.900[A] KOG0299 U3 snoRNP-associated protein (contains WD40 repeats)  ali follow..  15  84.......NELVEDGGFDAKEVDRELLASRLKEDDYTSKINPDVKIETAQLRGRHMRPLVGVVAYENF--VYSADKSGLIQKWEALQEKDTENRNDHVKEITCLAISNDGRWIVTGGLDHRIVIRDSVTLE----PQHCWKHHRDAVMGLAMRRGTNMFSCSADRSIKVWSLDQMSYIETLFGHQDVIFGVDALARERCVSVGGRDRTSRLWKIVEESQLKATAGYMEGSVDCVAMIDEDHFVTGSDNGVIALWSVQRKKPLFTYPLAPQPRWITSLAAIPYSNLFASGSWDGNIRLWKIAEGLRSATPLSVYGCINSLSLSLQGKVFAACGRETRVGRWK 494
50 -58.900[R] KOG1334 WD40 repeat protein  ali follow..  16  228.......TSALPRSRWQVLTALRQRQLGSSARFVYEAARTFVQRFRLQYLLGSHAGSVSTIHFNQRGTRLASSGDDLRVIVWDWVRQKPVLNFSGHDINVIQAKFFPNDSTLAMCGHDGQVRVAELINAS-YCENTKRVAKHRGPAHELALEPDSPFLTSGEDAVVFTIDLRQDRPVTRENDKKVGLYTISMNPANYQFAVGGHDQFVRIYDQRRIDKKENYCDFPTNITCVVYSHDGTELLASYNDEDIYLFNSSLSDGAQYVKRYNNDTIKCVNFYGPRSEFVVSGSDCGHVFFWEKSSSQIIQFMEGRGDIVNCLEPHPYLPVLATSGLDQHVRIWT 590
51 -58.800[S] KOG2106 Uncharacterized conserved protein, contains HELP and WD40 domains  ali follow..  16  162...EEQLQRHYAGHNDDVKCLAVHPDRITIATGPPHVRIWDSVTLNTLHVIGFFDRAVTCIAFSNGGTNLCADSNDHVLSVWDWQKEEKLADVKCSNEAVFAADFHPTDTNIIVTCGEITSLLLDTRRKLPLIRSDYSRTRKAKVVLCVTFSENGDTITGDSSGNILVWGKGTNRISAVQGAHEGGISPLCMLRDGTLVSGGGKDRKLISWSGNYQKLRKTTQGHTDELWGLAIHASKPQFLTCGHDKHATLWDAVGHRPVWD---KIIEDPAQSSGFHPSGSVVAVGTLTGRWFVFDTETKDLVTVHTDGNEQLSVMRYSPDGNFLAIGSHDNCIYIYG 556
52 -58.600[I] KOG0301 Phospholipase A2-activating protein (contains WD40 repeats)  ali follow..  13  16.MPQYTISHVIEAHKSDTKALAVTQGGCLISGRDETVKFWAKKGKKTHAFEQPKGITVNSIAYAEDGWRLFVGRRDGTIAVFGPSQAEPYAIFNEHKQNVCCLHINEKATHMLSGSWDSNVIIWPITELNSSSFTTIVCPGHTLSVWALASFPDLPYLSASADKTIRMWF--GDTTLSVFKGHTDVVRALVVLSSSH-FLSAGNDGHIIHWDVASASILRKFATQAHEF-IYSMTLSDSHILTTGEDGTLEFWAIDGGKDGNLAIVQLPTTNTWDAKVLLNSD-IAVAGSDGRIYIMTTDKNRKADILDAFDAEVVAKLTAKTERMKQEEHETVTIKVD. 363
53 -58.100[R] KOG2055 WD40 repeat protein  ali follow..  12  210.......ANFQAPSHSGIRCMSIHPYFPLLLTCDRTLRIYQLKVNPLVTSLHLRSSALQTALFHPDGKRVIAAGRRKYMYIWDLESAQVQKVQENFQPSMERFHVDPTGKYIALEGRSGHINLLHALTGQFATSF-----KIEGVLSDVLFTSDGSMLVLSYGAEVWHFNVEQRSVVRRWQVQDGSTTHFCLDPSNKYLAIGSKSGIVNIYDLQTSKPVTTLDNITFSINSMSFSQDSQVLAIASKKDTLRLVHVPSFSVFRNWPTATPLGRVTCLAFGKGGE-LCVGNEAGRVGLWKLAHYDLKFVPDKII--NWEIRLGKFGYVLLGIQVDVVI.... 555
54 -57.900[R] KOG1524 WD40 repeat-containing protein CHE-2  ali follow..  11  2..KLKLSASRKTRHTEMVCGVGWIGTEAILAADDHVFLLTNTANGKVENMVDAHNGAALCARWNSDGTGLLSSGEDGFVKMWSRSMQVAPIKWKAHDGIILCCDWNPTSDLIVTGGEDLKFKVWDGF-----GQILFNSSVHDYPITSISWNTDGTLFAVGSHNILRLCD-KSGWSHSLEKMNAGSVMALSWSPDGTQLAVGTAAGLVFHAHIIDKRLTPGQVMALLDERKIDLANDTLVVRDRADNKVLHFFDPTTGKAQGDGN--KHEHDIVELTVNQCGRNVAFRDQIGAVHIAMVKTFGVSQRMVKIGSLVEQLVFNDVTNMLCGIS-EGKIAVWP 531
55 -57.600[R] KOG0646 WD40 repeat protein  ali follow..  13  21..KTGTEQLQFKPCASPAHGLTAVGEKFSARNTSGSIFYWSWTKPQ-AEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRQQGNTLYEHNFNEHTMSVTDIVIDYGGCIISSSEDRTCKVWSLSRGKLLKNI-IFPSVINALALDPGGCVFYAGARDSKIYIGAINATQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTLIHAK--GSRKGPVNNQIVRKTIVANSNKTQVSWKSRGALIPPPLEKYER---PVEDTMDGIVTVDPPPFSDVPVYS 373
56 -57.300[R] KOG1273 WD40 repeat protein  ali follow..  14  2...................................NAPIIDPLQGDFPEVIELEHGVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNSAAITSVSWSKYGHRLLVSAADKSLTLWDVSTGEKIARTLCLACPLSSAPMIVDFDIDCTTLLPVSVPEMPDVLAPPQRSKCPESNPPFSPAAACFNKCGDLVYIGNSKGEILIVDYKSVRVLALVSSGAAPVKNIVFSRNGQYLLTNSHDRTIRIYENLLPTLFREFQDSVTKMHWKAPCFSGDGEWVVGGSGEHKIYIWD-RAGHLVKILEGPKEALIDLAWHPVHPIIVSVSLAGLVYIWA 345
57 -57.300[S] KOG4328 WD40 protein  ali follow..  10  159.SSSRVSKVSVKKEEPEDDSFSDYVNKEFSIPVEKIEFDLDLLTLEPQNVARVVPGRIFVVQFLPNVKMVAAGDKLGNVGFWNLDCGNEIYLFTPHSAPVSSIVFQQNSSRVISSSYDGLIRLMDVEKSV-----FDLVYSTDEAIFSLSQRPNDELYFGQDYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPVMATSSTDGTACLWDLRSMGAKKSTVNHSRAVHSAYFSPSGLSLATTSLDNYIGVLSGANFENTCMIYHNNT--SKFKAVWGWDDSYIYVGNLSKKIDVINPKLKRTVMELHNPRAIPCRIHCHPNVGTLAGSTAGGQVYVWT 514
58 -56.900[Z] KOG0313 Microtubule binding protein YTM1 (contains WD40 repeats)  ali follow..  17  34...SNIINKLLKDKNEFHKHVEFLIKGQFLRMPVVEIEYVEKCTAPQPEQCMFHDDWISSIKGAEEW--ILTGSYDKTSRIWSL-EGKSIMTIVGHTDVVKDVAWVKKDSLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTFCSGSWDKMLKIWSTVPTDEIVTLSGHMEAVSSVLWSDAEE-ICSASWDHTIRVWDVGSGSLKSTL-TGNKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSTSHTGWVTSVKWSPTHQQLISGSLDNIVKLWDTRSCKALYDLAAHEDKVLSVDWTDTGL-LLSGGADNKLYSYR 413
59 -56.800[DO] KOG0305 Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits  ali follow..  17  70.VMNQNRTRILAFRNKPKSLLSTNHSDSPHQNPVKPRRYIPQNSERVLAPGLRDDFSLNLLDWGSANVLAIAL--GDTVYLWDASSGSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSN----RQVRTLRGGHESRVGSLAWDNHILTTGGMDGKIVNNDVRIRSIVETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLAQWLHRFEEHTAAVRALAWCPFQASLLAGVGDGKIKFWNTHTGACLNSVETGSQ---VCSLLWSQSERELLSGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWN 416
60 -56.700[D] KOG1036 Mitotic spindle checkpoint protein BUB3, WD repeat superfamily  ali follow..  15  1......................................MTTVTPSAGRELSNPPSDGISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEFL-HGGAVLDCCFHDDFSGFSVGA-DYKVRRIVFNVGKEDICVEYFDFSILFFYTLCLFCDVTGVITGSWDKTVKCWDPRGASGPERTQTYLQPERVYSMSLVGHRLVVATAGRHVNIYDLRNMSEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEAAQAKAGRDIVYPVNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQLLAVASSYTFEEGEK 325
61 -56.500[R] COG2319 FOG: WD40 repeat  ali follow..  11  178.LPFRILDAPELRDDFYTSLLSWSPKGDLAIGLAENIYLWSKELGP-TRVLEESIYDVSSVAYSYNGDILAVGRVDGTLQFWQDNERV-PRISIHHPGDIGVLAWKPETNRLLVGKGNGNIFVYDIIWSEKAVLVATITNAHDEQVCGLTWNHDGSFASGGNDNRVCLFKGSDLRQPLYVWQQNAAVKALSFCPWQRSLLAGSHDKHIRFYNCFNGKKIDELYCG-AQITSIHWSPKYREFSVTTVQHRFAVYSWPQLECLVSVLPSVPDIRCVHSVLTSQTDSIIIASSNETIKFFDLSEESSWHNSRWHGIFDSQILEMLEG---IDGKIDSHLR... 535
62 -56.400[A] KOG0647 mRNA export protein (contains WD40 repeats)  ali follow..  16  2....................SFFNRSNTTSALGTAMANEKDLAND--IVINSPAEDSISDIAFSPQQDFMFSASSDGKVRIWDVQNGVPQRAQHESSSPVLCTRWSNDGTKVASGGCDNALKLYDIASGQ-----TQQIGMHSAPIKVLRFVNTECIVTGSWDKTIKYWDMRQPQPVSTVMMPER-VYSMDNKQSLLVVATAERHIAIINLANPTTIFKATTSPLKWQTRCVACYNEADGYAIGSVEGRCSIRYIDDGMQKKS-NGQSLVYPVNSIAFHPLYGTFVTAGGDGTFNFWDKNQRHRLKGYPTLQASIPVCSFNRNGSVFAYALSYDWHQGHM 339
63 -56.100[U] KOG1332 Vesicle coat complex COPII, subunit SEC13  ali follow..  16  7................................................TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGLIADLRGHEGPVWQVAWAHPGNILASCSYDRKVIIWREENGT---EKSHEHAGHDSSVNSVCWAPHDYLACGSSDGAISLLTYTGEEVKKINNAHTIGCNAVSWAPAVKRFASGGCDNLIKLWKEEEDKEEQKLEAHSDWVRDVAWAPSTSTIASCSQDGRVFIWTCDDASSNTWSPKHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDVCISDVNKGQGSVASVTEGQQNEQ.............. 322
64 -56.100[U] KOG0771 Prolactin regulatory element-binding protein/Protein transport protein SEC12p  ali follow..  12  1MASNQQPPSNLQTYGVPIYAVDWILEEAVRSKIDQDDDDDDGSSSSSYIVLSGGTDLPYRMAIHPRQGGLICALPENIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSMK----TLLNESKTHASVKSLTFSESGKFLVSLGAPLCRVWDVNASAAIASLSKEKDEFASCRFSVDNSVAANTQRGGSIITWDTTSWRRRSSLIKRNNSISAFNVSADGKLLAVGTLEGDVLIIDSTKMQTNQIVK-KAHLGLVTALTFSPDSRCLVSVSFDSRARLTVIKQKGEKRVYLWVAALLFVLVYVVLYYLMVAMGIIH...... 383
65 -55.600[YU] KOG2445 Nuclear pore complex component (sc Seh1)  ali follow..  14  2...............................................QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDELSDSWRAHDSSIVAIDWASPGRIIASASYDKTVKLWEEDPDQEECNKLCTLNDSKGSLYSVKFAPAHKLACLGNDGILRLYDALEPSDLRSPANHLQSDFCLSWCPSRFEKLAVSALEQAIIYKDGKLHVAAKLPGHKSLIRSISWAPSYQLIATGCKDGRIRIFKITEKLSPLASEESL--TNSNMFDNSADVDMDAQGRSDSNTELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWK 332
66 -54.800[R] KOG2919 Guanine nucleotide-binding protein  ali follow..  12  78IEDTLELTSNGNEAKPEDQELAIAPVLQYFQGALVEL------GRRCWTSSTEAQHYTKGCYWSPDGTCLLVPVHLDGMHVIEMPSDLYSADTVQEGGTVYDCVWYPHMNLWLATRQHEPIHMWDAFDGSLRCSYSYDAVDEVMAAISLAFSHDGEQIYAGYKRCIKIFDTSRPGRFCDDYPVKFAISCIAQTTAHPTLTCGNWHGYIQHFDLRCSHPLFTLGGHKGGITQLRYGEFGNLFSGARKCDKILQWDMRYKQPLVELQRHVDTNQRIQFDLASDSNWLASGDTRGFVNVWDLKKYGDPSVLPLHSDCCNGVALNPAMPILATSSGENAVVMWW 482
67 -54.600[R] KOG0322 G-protein beta subunit-like protein GNB1L, contains WD repeats  ali follow..  10  1.......................................MAVLPPDPVFSLRSPMGAVNSLCFQESDR-LLAGTIKGSVFLWDLQTNRSALHFEVGSDPITSLHHTPDR--LVTQEKGGTITMFSIGGSSYVKERGNHLGFCRSALHTNTSKTNEQLLFPCEESSIGVLHVTDAAAPTQILVPDDPCFKPFECASQLFLLAGYESGHFLTWDISSSVIL-DVMELAQDATSVDYDPVTNRGIVGGPTDKLISFSYQRSSMQMQLGSEIKNPGVNGVRIRPDQKVFASAGWDGRIRIFSWKSLRPLAVLTQHNGGVMDLAFSSQAPIMAAAGMDGQISLWD 320
68 -54.300[R] KOG2321 WD40 repeat protein  ali follow..  10  2......SLKVQNPNNVRVYTVSGEGVTQRLPNISKRKLKKDYALSHRIELLQEYPEASNRIKCTRDGKYAMATGYKPHIKVFDFAEMSLKFERHTDAENVQFEILSDDWTKSVHLQTDRTVDFHSQGGIHYSTR-------IPKYGRDLKYHYPNDLYLAAAGDEVYRLNLEQGRFLNPLKSPTGGVNVIDINPMHQLLAFGTDAGSVEFWDPRDRSRVGILSDNSRSVTALKYRNDGLNVAIGLSDGATLLYDLRSSSPYMSKD-QGYSMPIKSLHWMDDGTARVLSADSKIIKIWEKDTGKPFSSI-EPTVELNDVCPIEGTGLILTANEGSPMHAFY 352
69 -53.900[R] KOG2444 WD40 repeat protein  ali follow..  12  4............EFDNPPLCMKSNKDGSRLVVGDGSIRFYDTQQHEEEFQEFQTKSSIRGVDLDEHKKRVYAVTKNRSLCVFDIDTGKRVRCIKCHRSVPTAICTLPKSQQLATADESGEVKTWNLDPEVSENANIRKWQEQDEDINDLKVDVKSNLLATSSDGTLGAYDLRKAKLKMRSELMHSEL--YSVCGTNRSVYVGGEDGYVEVFNLNENLLERVESGFEMGVNGIVELRSGLLGLTSQGSNRMRLLNVQPSKRLGYAGYHGDDDGIDAITISTDKSTVTMISMSCTIKKWDMGPIID-EIPILRAQDAKSKKMRKTEGFFDGLVGPKNDSDSD 346
70 -53.600[T] KOG1354 Serine/threonine protein phosphatase 2A, regulatory subunit  ali follow..  12  1............................MAGAGGGNDIQWCFSQVKAVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLIFANAHTYHINSISINSDYETYLSADDLRINLWHLEITDRSANMEELTEVITAAEFHPNSNTFVYSSSKGTIRLCDMRASALCSFFSEIISSISDVKFSHSGRYMMTRD-YLSVKIWDLNENRPVETYQVHEYIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASFNKKILHTAWHPKENIIAVATTNN-LYIFQ 443
71 -53.600[S] KOG0294 WD40 repeat-containing protein  ali follow..  13  32.SVKFELKQTFADSSYARSITSLAVQWPWVASGDGRIFVYDMRTRKQSQIILSHAGRVNTLKFTPDLSLLLSGSDDGHMIATRVGSWTKEYDWQKAGQAVTHVSCHPSSKLALSLGGDQVLNTWNLVNGCVAHKTLKNKATLDFQTGCLSWSKQGDHFTLSGPLVLEIWGIENAHVMRRIE-MPSKPICITWL-DGNECLTGLDNGNIAWISLKDEDPPTFILAHEVRVKAIAY--LNEFLATVSIAGQIKVWKIDMETRKLEEIARSFMDCPTDLGLLDLRQFGNVRPVEQRTKVEEKPKAKVQSAKPAAPRGFVTIEYEQDKKLDAEKKKEKKKNKKD 377
72 -53.100[T] COG5170 Serine/threonine protein phosphatase 2A, regulatory subunit  ali follow..  12  2...........................DDIEDSLDQWKFAQCFGDKGDVEDITEADIISAVEFDHTGDYLATGDKGGRVVLFERNHSKKGCEYKEIEEKINKIRWCKRTNHFLLSTNDKTIKLWKLYEKNAAYPRRVYANAHAYHINSISVNSDAETYISADDLRINLWNLSISDHSENMEELTEVITSAEFHPNCNHLMYSSSKGNIKLLDLRQSALKSFFSEIISSISDVKFSQNGRYILSRD-YLTLKIWDVNMKAPVKTIPLHDVIFDKFECTFSGDDKHVLSGSYSNNFGIYPTDSSLPGDDNLDYNKKILHASWHPFEDSVAIAATNN-LFVFS 461
73 -53.100[DK] KOG0973 Histone transcription regulator HIRA, WD repeat superfamily  ali follow..  16  2.................................................TFVGHDTGILAIDCHPSGKKFITCGSNGLVVVWNAEP-PKLLFQVESQSQSNSCRWSPDGKRFAFGSDDSSVSVWEYVGLINSMKECCVLRGHSMEVLTVEWSPNGKLASGSIDYRIIIYNARKLDRITVLNDIQLPVKGLSWDPIGKYLASLEGDKKLRFWATDSWQCVKSVTIEETMLTRLDWSPDGKYLMTPAAVRLIKLIQRQTWKSDQFLAGHH--KGTTCVRAMPQLTCAAVGSRDKSISIWVFPGTLKPLFVINNIFNHTVMDFAWCGRNLLACSQDGTVKVIH 345
74 -52.800[BL] KOG1009 Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats)  ali follow..  14  4.............................................ITCEIAWHNKEPVYSLDFQHGTARLASAGVDTNVRIWKVEKGEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPETVVKTLRGHLEDVYDICWATDGNMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCDRVLRVYSIQKKRVAFNVSSMKSFFRRLSFTPDGSLLLTPAGCVESGENVMNTKRPIAHLPCPPVVETGVELMSLPYRLVFAVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVT 374
75 -52.000[R] KOG1310 WD40 repeat protein  ali follow..  19  1.......MDNLSFHDGNIFNLLHTRSQDPSHEVDQRFHSSLVRRLSQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSITGHTANIFCTKFVPEDELVVSGAGDAEVRLFNTSRLSGRAIPSALYQCHTRRVKKLAVEPGNPVWSASEDGTLRQHDFRESTSLADPPKQTLSLKSCDISARPHLLLVGGSDAFARLYDRRMLPPLSERGRTNLHLTHVTFSPNGEEVLLSYSGEHVYLMNVNAIDMKRRYVGHNVGTDIKQASFGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWS 688
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rodrigues AP, Grant BJ, Godzik A, Friedberg I. The 2006 automated function prediction meeting. BMC Bioinformatics. 2007 May 22;8 Suppl 4:S1-4.