current user: public

Please be advised that we have recently moved our server to a new location. We tried our best to fully test all functions on the website, but if something does not work for you please let us know.

Query: [V] KOG1707 Predicted Ras related/Rac-GTP binding protein, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550    .  560    .  570    .  580    .  590    .  600    .  610    .  620    .  630    .  640    .
# Score Template Links and tools%idFirst MWMGVGDSSGSPKPIRIVVVGEKGSGKSSLIMAAARNTFHPNIPSLLPYTNLPSEFFPDRIPATVIDTSSRPEDKGKVVKEVRQADAIVLTFAFDRPETLDRLSKYWLPLFRQLEVRVPIIVAGYEVDNKEAYNHFSIEQITSALMKQYREVETSIQWSAQRLDQAKDVLYYAQKAVIDPVGPVFDQENNVLKPRCIAALKRIFLLSDHNMDGILSDEELNELQKKCFDTPLVPCEIKQMKNVMQVTFPQGVNERGLTLDGFLFLNTRLIEEARIQTLWTMLRKFGYSNDLRLGDDLVPYSSFKRQADQSVELTNVAIEFLREVYEFFDSNGDNNLEPHEMGYLFETAPESPWTKPLYKDVTEENMDGGLSLEAFLSLWSLMTLIDPPRSLEYLMYIRFPSDDPSSAVRVTRKRVLDRKEKKSERKVVQCFVFGPKNAGKSALLNQFIGRSYDDDSNNNNGSTDEHYAVNMVKEPGVISDTDKTLVLKEVRIKDDGFMLSKEALAACDVAIFIYDSSDEYSWNRAVDMLAEVATIAKDSGYVFPCLMVAAKTDLDPFPVAIQESTRVTQDIGIDAPIPISSKLGDVSNLFRKILTAAENPHLNIPEIESKKKRSCKLNNRSLMAVSIGTAVLIAGLASFRLYTARKQSLast
1 -182.000[V] KOG1707 Predicted Ras related/Rac-GTP binding protein  ali  100  1MWMGVGDSSGSPKPIRIVVVGEKGSGKSSLIMAAARNTFHPNIPSLLPYTNLPSEFFPDRIPATVIDTSSRPEDKGKVVKEVRQADAIVLTFAFDRPETLDRLSKYWLPLFRQLEVRVPIIVAGYEVDNKEAYNHFSIEQITSALMKQYREVETSIQWSAQRLDQAKDVLYYAQKAVIDPVGPVFDQENNVLKPRCIAALKRIFLLSDHNMDGILSDEELNELQKKCFDTPLVPCEIKQMKNVMQVTFPQGVNERGLTLDGFLFLNTRLIEEARIQTLWTMLRKFGYSNDLRLGDDLVPYSSFKRQADQSVELTNVAIEFLREVYEFFDSNGDNNLEPHEMGYLFETAPESPWTKPLYKDVTEENMDGGLSLEAFLSLWSLMTLIDPPRSLEYLMYIRFPSDDPSSAVRVTRKRVLDRKEKKSERKVVQCFVFGPKNAGKSALLNQFIGRSYDDDSNNNNGSTDEHYAVNMVKEPGVISDTDKTLVLKEVRIKDDGFMLSKEALAACDVAIFIYDSSDEYSWNRAVDMLAEVATIAKDSGYVFPCLMVAAKTDLDPFPVAIQESTRVTQDIGIDAPIPISSKLGDVSNLFRKILTAAENPHLNIPEIESKKKRSCKLNNRSLMAVSIGTAVLIAGLASFRLYTARKQS 648
2 -44.600[R] KOG0393 Ras-related small GTPase, Rho type  ali follow..  18  2............QAIKCVVVGDGAVGKTCLLLSYTTNAFPEYILTVFDTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLREDRDLQPVSHTQGYVMAKEIKAVKYLECSALTQIGLKQVFDEAIRTGLTPPQTPQTRAKKS......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 190
3 -34.400[R] KOG0395 Ras-related GTPase  ali follow..  15  13.......SVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDYTPTIEDFHRKVYNIRGDMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDEVKR-LQKQILEVKAELPMVICGNKNDHGELCRQVPTTEAELLVSGDE----AYFEVSAKKNTNVDEMFYVLFSMAKLPHEMSPALHRK.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 203
4 -32.100[U] KOG0096 GTPase Ran/TC4/GSP1 (nuclear protein transport pathway), small G protein superfamily  ali follow..  16  1..MSAPAANGEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVCENIPIVLCGNKVDVKERKVKAKTITFHRKK--------QYYDISAKSNYNFEKPFLWLARKLA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 171
5 -31.000[R] KOG0079 GTP-binding protein H-ray, small G protein superfamily  ali follow..  15  1....MAGTRDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIDFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKR-WLQEIENNCDSVQKVLVGNKCEENERRVVLESDARNYAQSMNIS----FFETSAKEDKNVEPMFTCITSLVL...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 171
6 -30.700[R] KOG0394 Ras-related GTPase  ali follow..  15  2.......PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIDFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNN-WREEFLIQAENFPFVLIGNKVDVDDGNSR-VVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDAL...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 177
7 -30.600[R] KOG1673 Ras GTPases  ali follow..  13  93.....SSSDSDLVSLKISLLGDCQTGKTTFVVKYVGDENQSFLEMTLNLMDKTFYVQGVTISFSIWDVGGDEKSKDHIPIACKDAVAILFMFDLTSRSTLNSVFG-WYSQARKWNKTAIPILIGTKFDDRLPPNLQWTIVTQARAYAKVMNA-SLFFSSATHNINVNKIFKFILARLF...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 267
8 -30.200[T] KOG4252 GTP-binding protein  ali follow..  17  10..............IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRGSFEAVSS-WREKVVAEVGDIPTVLVQNKIDLLDDSC---IKNEEAEALAKRLRL-RFYRTSVKEDLNVNEVFKYLAEKYLQ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 171
9 -29.900[U] KOG0092 GTPase Rab5/YPT51 and related small G protein superfamily GTPases  ali follow..  16  21..............FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKN-WVKELQRQSPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLL----FMETSAKTSMNVNEIFMAIAKKLP...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 182
10 -29.700[TU] KOG0084 GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins  ali follow..  16  9..............FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYSENVNKLLVGNKCDLTSQKVVSTETAKAFADELGIP----FLETSAKNATNVEEAFMAMTAAIK...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 170
11 -29.600[TU] KOG0078 GTP-binding protein SEC4, small G protein superfamily, and related Ras family GTP-binding proteins  ali follow..  17  10..............IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRT-WFSNVEQHSENVYKILIGNKCDCEDQRQVSFEQGQALADELGVK----FLEASAKTNVNVDEAFFTLAREIK...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 171
12 -29.500[R] KOG0088 GTPase Rab21, small G protein superfamily  ali follow..  17  1..MLETNVDQKSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTISFQNKTVNVEDCQADLHIWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKN-WVLEIKTCGNTAEILIVGNKIDLEEERQVTRQDAEAYAESEGAL----YMETSAQDNVGISDAFESLTAKMI...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 174
13 -29.500[R] KOG0080 GTPase Rab18, small G protein superfamily  ali follow..  17  8.............TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTDIVNMLVGNKIDKENR----EVDRNEGLKFARKHSM-LFIEASAKTCDGVQCAFEELVEKII...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 170
14 -29.500[U] KOG0095 GTPase Rab30, small G protein superfamily  ali follow..  18  10..............FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPE-WLREIEQYSNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMY----YLETSAKESDNVEKLFLDLACRLI...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 171
15 -29.000[U] KOG0094 GTPase Rab6/YPT6/Ryh1, small G protein superfamily  ali follow..  15  2......ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSK-WIEEVRNEAGDVIIVLVGNKTDLVEKRQVSIEEGDSKGREYGVM----FIETSAKAGFNIKPLFRKIAAAL....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 170
16 -29.000[U] KOG0093 GTPase Rab3, small G protein superfamily  ali follow..  14  23..............FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSDNAQVLLVGNKCDMEDERV---VSSERGRQLADHLGF-EFFEASAKDNINVKQTFERLVDVIC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 184
17 -28.900[U] KOG0086 GTPase Rab4, small G protein superfamily  ali follow..  17  9..............FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAA-WLTDARTLSPNIVVILCGNKKDLDPEREVTFLEASRFAQENELM----FLETSALTGENVEEAFLKCARTIL...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 170
18 -28.900[U] KOG0097 GTPase Rab14, small G protein superfamily  ali follow..  20  12..............FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSS-WLTDARNLNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLL----FLEASAKTGENVEDAFLEAAKKIY...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 173
19 -28.800[U] KOG0098 GTPase Rab2, small G protein superfamily  ali follow..  17  7..............FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIEFGARMVTIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTS-WLEDARQHNSNMVIMLIGNKSDLEARREVKREEGEAFAREHGLV----FMETSAKTAANVEEAFIDTAKEIY...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 168
20 -28.700[U] KOG0087 GTPase Rab11/YPT3, small G protein superfamily  ali follow..  17  1....MCQEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGR-WLKELREHDSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLS----FIETSAMDASNVEEAFQTVLTEIF...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 172
21 -28.300[R] KOG0083 GTPase Rab26/Rab37, small G protein superfamily  ali follow..  10  180...AHQQPFDDTVNHKTILLGDSGVGKTSFLVKYNTGEFRLGSFSAIALTLFRISQPGGRLNQLLPKKHSVASFRANCPCKQETDNGLALLPSGSRKPSISVATPTPLASGSPTRRESLVKPTWQHITPGQLPPKTLDKINGI----ASDDSDDDGYPKRRPSVIVHQRQQSISQQPLLPEYMTSASIFRDHAPQ------------SQSQSQSHHLPSGNGFMARLNSVRLASATEQQPLL---------------------------------------------------------------------------------------DSGGGVSATAVARPPVAPAPVAPGPGSEGASATLCKNAG-------------------------------------RALIRMISSSKAPEEEDEFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPS------YFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRA----WLGEIREYAEDVVIVLIGNKADCSGSEVKREDGERLGREHNVP--METSAKTGNVELSFTAVARQLKSRGYEHGDDGKFN..................................... 645
22 -27.700[R] KOG0091 GTPase Rab39, small G protein superfamily  ali follow..  13  10..............FRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIDGTQIKLQLWDTAGQERFRSITKSYYRNSVGVLLVYDISNHASFEHIPL-WMMEAQRHIERPVFALVGCKLDLINAGGHREVTTEEAQKFAKQHGL-HFVETSARSGANVEEAFRMVTQEVY...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 176
23 -26.500[U] KOG0081 GTPase Rab27, small G protein superfamily  ali follow..  14  10..............IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVASGPDGATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRN-WISQLQMHAENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIP----YFETSAANGTNISQAIEMLLDLIM...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 182
24 -25.100[R] COG2229 Predicted GTPase  ali follow..  15  2............RENKIIFTGPVGVGKTTAIAAISDEALVQTDASASDNTTVAMDYGDEDTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKDLEF-FLHSFRGLLEKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVP----VFEIDARKEDDVKQLVSAMLFSI....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 172
25 -21.700[R] KOG0075 GTP-binding ADP-ribosylation factor-like protein  ali follow..  16  8.ILEWFKSIFWKEEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNM--RKITRGNVTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQAGIPVLVLGNKRDLPGALDETGLIERMNLSSIQDRE--CCYSISCKEKDNIDITLQWLIQHS....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181
26 -21.500[U] KOG0072 GTP-binding ADP-ribosylation factor-like protein ARL1  ali follow..  12  4GVLSYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVE---QVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEEAGAILVVLANKQDMDGCMTVAEVHHALGLENLKNRT--QIFKTSATKGEGLDQAMDWLSNTL....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 177
27 -21.400[U] KOG0070 GTP-binding ADP-ribosylation factor Arf1  ali follow..  12  4SFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE---TVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDERDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH--YIQSTCATSGEGLYEGLDWLSNNI....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 177
28 -21.400[U] KOG0071 GTP-binding ADP-ribosylation factor Arf6 (dArf3)  ali follow..  12  8GFSKPFSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVE---TVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDRERDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDRL--NVQPTCALTGDGLLEGLAWLSQNA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181
29 -21.300[U] KOG0077 Vesicle coat complex COPII, GTPase subunit SAR1  ali follow..  14  18...........QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSE---ELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEAATVPFLILGNKIDIPYAASEDELRYHLVTLGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 192
30 -21.000[UZ] KOG0073 GTP-binding ADP-ribosylation factor-like protein ARL2  ali follow..  3LLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIK---TLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERAGATLLIFANKQDLPGALSSNAIREALELDSIRSHH--CIQGCSAVTGENLLPGIDWLLDDI....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 176
31 -21.000[R] KOG0074 GTP-binding ADP-ribosylation factor-like protein ARL3  ali follow..  14  14..........PDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIK---SVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRV--QIQSCSALTGEGVQDGMNWVCKNV....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 177
32 -20.800[T] KOG3886 GTP-binding protein  ali follow..  10  33......VLPNTAMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQGNLVLNLWDCGGQDTFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYY-LEAILQNSPDAKIFCLVHKMDLVQEDQRDLIFKEREEDLRRLSRLECSCFRTSIWDETLYKAWSSIVYQLIPNVQQL------------EMNLRNFAEIIEADEVLLFERATFLVISHYQCKEQRDAHRFEKISNIIKQ.................................................................................................................................................................................................................................................................................................................................................................................................................. 298
33 -20.700[U] KOG0076 GTP-binding ADP-ribosylation factor-like protein yARL3  ali follow..  12  4LVKGLYNNWNKKEQYSILILGLDNAGKTTFLETLKKEALEKIQPTV---QNVATIPVDSKQILKFWDVGGQESLRSMWSEYYSLCHGIIFIVDSSDRERLDECSTTLQSVVMDEEEGVPILMLANKQDRQDRMEVQDIKEVFNKIAEHISARDSRVLISALTGEGVKDAIEWMIVRL....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 186
34 -20.700[R] COG1100 GTPase SAR1 and related small G proteins  ali follow..  13  14.........GSNKELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVE---TLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEEQDAALLVFANKQDQPGALSASEVSKELNLVELKDRS--SIVASSAIKGEGITEGLDWLIDVI....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 178
35 -19.600[R] COG3596 Predicted GTPase  ali follow..  13  27..ILQQINQLTHYEPVIGIMGKTGAGKSSLCNALFAGEVSSDVAACTRD-PLRFRLQIGEHFMTIVDLPGDTEYAALYREQLPRLDLILWLIKADDRAL--ATDEHFYRQVIGEAYRHKMLFVISQSDKAETEQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLRVMAERMIKCL....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 216
36 -18.700[U] KOG0090 Signal recognition particle receptor, beta subunit (small G protein superfamily)  ali follow..  13  42IWLLSIRLFRRTKSNTVLLSGLSGSGKTVLFYQLRDGSSHQGAVTSMEPNEGTFVLKGKVKPVHLIDVPGHSRLISKLEEYLPRAAAVVFVVDALELPNIRAASEYLYDILTNIKNKTPVLLCCNKTDKVTAHTKEFIRKQMEKEIDKLRVSRSAISTADIANDFTLGIFSHCHNKVTVAEASGLTGETDQVQEFIREHVK............................................................................................................................................................................................................................................................................................................................................................................................................................................................... 259
37 -18.600[E] COG4917 Ethanolamine utilization protein  ali follow..  16  3...............RIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKG-----------DIDTPGHPRWYHALITTLQDVDMLIYVHGANDPES------RLPAGLLDIGVSKRQIAVISKTDMPDADVAATRK-----LLLETGFEEPMFELNSHDPQSVQQLVDYLASLT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 146
38 -17.700[S] KOG4273 Uncharacterized conserved protein  ali follow..  12  6...............GVLVVGSSGVGKRTLLSRLLSVEFEDSSESSSQTEVHGWTINTKTADVSVCISHICDEYSLPNLPNSHPLVALVMVFDLSELSTLVALQD-WVSHTDINSFDI-LLCIGNKVDRVPHHLAHDEYRRRLLKASDPSR-FGISETEGSSLLGSEDASLDIRGACLE-------------------CSENNIEFIEACASNPDFDKCLSVDG--------DSQGVERLFGALSAHMWPGM............................................................................................................................................................................................................................................................................................................................................................................................................ 223
39 -17.300[R] COG1084 Predicted GTPase  ali follow..  15  159..........DLDAFTVVIAGFPNVGKSTLLRTLTGAEPEVADYPFTTKGIQIGHLERKWKRIQVIDTPGNNIELQAMVALENIADVIMFIFDASETCGYTLESQYSLYLGIRSVFDIPVVTVFNKMDLAENVKYLE---------EYINMVEDPLKVSAFEGRGVSKIIKKLEGLY....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 325
40 -16.600[R] COG1159 GTPase  ali follow..  12  11................IAIVGRPNVGKSTLLNKLLGQKISTSRKAQTTRHRIVGIHTEGPYQAIYVDTPGNRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLRDGK-----APVILAVNKVDNVQEKVDLL---PHLQFLASQMNFLDIVPISAETGMNVDTIAGIVRKHLHFPEDYITDRSQRFMASEIIR--EKLMRFLGAELPYSVNERGGYDINGLILVEREGQKKM--VIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWAALRSLGYVDDL..................................................................................................................................................................................................................................................................................................................................................................... 301
41 -15.700[U] KOG3887 Predicted small GTPase involved in nuclear protein import  ali follow..  11  49GVLDFSDPFSTEVKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKICRE-NSSFVNFQIWDFPGQIDFFDPTFDYFRGTGALIFVIDSQDDYMEALARHLTVTRAYKVNTDINFEVFIHKVDGLSDDHKIETQRDIHQRANDLEKIHLSFYLTSIYDHSIFEAFSKVVQKLI-PQLPTLENLLNIFISNSGIEKAFLF............................................................................................................................................................................................................................................................................................................................................................................................................................................................ 263
42 -15.500[R] COG1160 Predicted GTPases  ali follow..  13  5...............VVALVGRPNVGKSTLFNRLTRTRLVADFPGLTRD-RKYGHAHIAGYDFIVIDTGGEEKMAEQSLLAIDEADIVLFLVDAR--AGLTAADIGIANYLRQRQNK-ITVVVANKTD--------GIDADSHCAEFYQLGLGEIEQIAASQGRGVTQLMEQVLAPFAEKMENADENDRTSEEEQDEWE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QEFDFDSEEDTALIDDALDEELEEEQDKNIKIAIVGRPNVGKSTLTNRILGEDRV---------VFDMPGTTRDSIYIPMERDGQQYTLIDTAGEKFSVIKTLQAIQDANVVLLTIDARENIS-LSLLGFILN---------AGRSLVIVVNKWDGLDQDVKDRVKSELDRRIDFARVHFISALHGGVGNLFDSIKEAYACATQKMTTSLLTR..................................... 399
43 -14.500[R] KOG2486 Predicted GTPase  ali follow..  13  137...............EFALVGRSNVGKSSLLNSLVRRK----LTSKKPGKTQCINHFRINDKWYLVDLPG-NKFTKDYFLNRSTLVSVFLLVDAS--IPVKPIDLEYASWLGQN--QVPMTLIFTKCDNGGKKPEANIKEFQDLIQGFFETTPPWIMTSSVTNQGRDEILLHMAQLR....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 312
44 -13.500[Z] KOG0030 Myosin essential light chain, EF-Hand protein superfamily  ali follow..  16  5..........................................................................................................................................................................................TEDQTADLIPSTEFKEAFQLFDRTGDGKILYSQCGDVMRAL-GQNPTNAEVLKV---LGNPKSDEMNVKVLDFEHFLPMLQ----------------------------------------TVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEE---VAGHEDSNGCINYEAFVRH.............................................................................................................................................................................................................................................................................. 153
45 -13.300[R] KOG1490 GTP-binding protein CRFG/NOG1 (ODN superfamily)  ali follow..  11  171................VLICGYPNVGKSSFMNKVTRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPG-EMCSITALAHLRAAVLFFLDISGSCGYTIAQQAAL-FHSIKSLFMNKPLVIVCNKTDLMPMENISEMKSEAMKTAMGASEEQVLLKMSTLTDEGVMSVKNAACERLLD-----QRVEAKMKSKKINDHLNRFHVAIPKPRDSTEKDLEEENGGAGVYSASLKKNYIHNVADFIDPDILQRLAESEIRKKKAILIKNHRLKKTVAQNRSTVPRKFDKDKKYTTKRMGRELSAMGLDPSSAMDRARSKSRGRKRDRSEDAGNDAMDVDDEQQSNKKQRVRSKSRAMSISRSQSRPPAHEVVPGEGFKDS-------------------TQKLSAIKISNKSHKKRDKNARRGEADRVI-KHLFSGKRGKGKTD.............................................................................................................................................................................................................. 669
46 -12.600[R] COG0486 Predicted GTPase  ali follow..  16  214VRSEAKQGSILREGMKVVIAGRPNAGKSSLLNALAGREIVTDIAGTTRDV-LREHIHIDGMPLHIIDTAGLREATDEVESEIEQADRILLMLDSTEADN-QDLEKVRSEFLTKLPSNIPVTIVRNKADLSGENEGIVEQNGY-----------TVITLSAKTQQGIALLREHLKQSMGYQTNMLARRRHLEALEQAATHLQQGHVQLTQFYAGELLAEELRR-VQNHLSEITGQFTSDDLLGNIFSSF................................................................................................................................................................................................................................................................................................................................................................................................................ 461
47 -12.400[J] KOG0466 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)  ali follow..  14  32....SHEVISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYARLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEPQTSEHLAAIEIMKLKH------ILILQNKIDLVKERQAKEQYEQILAFVQGT-EGAPIIPISAQLKYNIEVVCEYIVKKIPVP--------PRDFTSEPRLIVIRSFDV.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 264
48 -12.200[Z] KOG0031 Myosin regulatory light chain, EF-Hand protein superfamily  ali follow..  14  21.............................................................................................................................................................................................SMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMK----------ASGPINFTVFLTMFGEKLKGADPE------------------------------------------DVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNAAFPPDVGGNVDYKNICYV.............................................................................................................................................................................................................................................................................. 160
49 -11.900[R] COG0218 Predicted GTPase  ali follow..  13  27...............EIALAGRSNVGKSSFINTMLNRKNLARTSGK-PGKTQLLNFFNIDDKMRFVDVPGREKWGCMIEEYLTTREVVSLVDLRHDPSADDVQMYEFLKYY-----EIPVIIVATKADKIPRGKWNKHESAIKKKL-NFDPSDDFILFSSVSKAGMDEAWDAILEKL....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 195
50 -11.900[T] KOG0027 Calmodulin and related proteins (EF-Hand superfamily)  ali follow..  9..............................................................................................................................................................ARQLETKKPQTGRKISRGTIHSQQSQPEDIQMKYTRKELKEYRQLFNMFDTDGSGAIGNEELKQAMISI-GLHANKAEIDNVIKEVDAD-----GNGEIDFEEFCACMKKSQNIVKSTNEELIRECFEIFDQ---RNGIITENEFKYIAKEFGDFDDE----AEKVFRELDVSANGHLSADQFATIVEDYLLNDPKHDIDTGDSDVERYDDRHDDRASPMPNHLSTVP...................................................................................................................................................................................................................................................................... 228
51 -11.900[J] KOG1191 Mitochondrial GTPase  ali follow..  14  340ALDTANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSEIVTEVAGTTRDV-VEANVTVRGVPITLLDTAGIRETNDIVEKAAKVADVIIMAVSAVEGQSDKVGVSFYDLFGGLLYLKQPMILVMNKIDCAPPGSCDQLED----QRKKEEVFHKSVFTSAVTGQGIEELEDAILEILGLDRVPTVNQRQCEQLVRTKEALVRLREAIEDEIPIDFWTIELR-------------EAALSLAQISGQDVSEEVLSSIFA...................................................................................................................................................................................................................................................................................................................................................................................................... 607
52 -11.700[F] COG1618 Predicted nucleotide kinase  ali follow..  11  1....MRIEGKEKTMLRIAVTGSPGVGKSTVVAKTAEKLAEKPGFKIGGIRTAEIRKEGHREGFSIRDLATGKTGIANAVRNALACDLVVI----DEIGPMELISQSFVSAVEEVLESDKPVLAVLHHSSRHP------------LAQRFRKGFEVLTVDKGNRDELPEKITNRFLRKL...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 183
53 -11.600[ZD] KOG0028 Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein  ali follow..  17  71............................................................................................................................................................................................KFELSEAQKCDIKEAFDLFDNEGTGYIEVKELKVAIRAL-GFEPKKEEIKRMISDIDKD-----CSGRIAFNVFLQLMTIKMEKDTKEEILKAFRLFDDDDTGKISFRNLKRVARELGETLTDE--------LREMIDEADLDNDGEVNQEEFLRIMK.............................................................................................................................................................................................................................................................................................................. 216
54 -11.500[J] COG5257 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)  ali follow..  13  1........MKNQSEINIGLVGHVDHGKTTLTKALSGVWTDTHSEETKRGISIRLTETELLRKVSFVDAPGHETLMATMLSGAALMDGAILVIAANEPQTKEHLMALDVIGVKD------VIVVQNKIDIVSKERALESYREIKEFVKGTAEDAPIIPVSAQQGANIDILIETIEERIKTP--------KRDVDKPARMYVARSFDI----------GADPEHLAGGVIGGSLVQGRLR.......................................................................................................................................................................................................................................................................................................................................................................................................................... 243
55 -11.400[TU] KOG4223 Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily)  ali follow..  12  78...............................................................................................................DESKERLGKIVDRIDNDGDGFVTTEELKTWIKRVQKRYIFDNV-YDRDKDDKISWEEYKQATYGYYLGNPAEFHDSSDHHTFKKMLPRDERRFKAADLNGDLTATREEFTAFLHPEEFEHMKEIVVLETLEDIDKN-----GDGFVDQDEYIADMFSHEENGPEP--------------------------------------DWVLSEREQFNEFRDLNKDGKLDKDEIRHWILPQDYDHAQAEARHYESDKNKDEKLTKEEILENWNMFV......................................................................................................................................................................................................................................................................... 313
56 -11.200[J] KOG0460 Mitochondrial translation elongation factor Tu  ali follow..  12  41.YADEKVFVRKKPHVNIGTIGHVDHGKTTLTAAITKDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDPQTREHLLLARQVGVKQ------IVVYINKVDMVEPDMIELVEMEMRELLSEY-DGDNTPIVSGSALCALEGR-LNSITKLMEAVDSYITLPERKTDVPFLMAIEDVFSISGRGERGTLKKGAEIEIVGYGSHLKTTVTGIEMFKKQLDAAVAG--DNCGLLLRS---IKREQLKRGMIVAQ-TVAPHQKFKASFYILTKEEGGRRTGFVDKYRPQLYSRTSDVTVELTHPDPNDSDKMVMPGD.................................................................................................................................................................................................................................................................................................................... 400
57 -11.200[DZ] COG5019 Septin family protein  ali follow..  10  87.....RRCVRQGFNFNVLVLGESGSGKSTLVNTLLNRDVYPP-TVMINSSAVEIVENGISLQLNVIDTPG-ELEKHNPRSTIQDPRVACIFFIQPTGHAISAMELRVMLALHEKVNIIPII---AKADTLTDDELNFTKEMILRDIQYH-NIRIFFPPTYETDDPESVAENADIMSRIPFAIIASNTFVVNNEGKRVRGRRYPWGVVEVDNEEHSDFPKLREM--------LIRTHLEELKEQTNKLYEAYRTER--------------------------LLSSGISQDHSVFREVNPSAKLEEERALHEEKLMKMEAEMKTIFSQKVQEKEDRLKQSENE.................................................................................................................................................................................................................................................................................................................. 425
58 -11.000[DZU] KOG2655 Septin family protein (P-loop GTPase)  ali follow..  11  27.....RKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPE-TVKLEASTVEIEERGVKLRLTVVDTPG-RDESGLNRRNIVDNRIHCCFYFIS--PFGHGLKPLDVEFMKKLHSKVNIVPVIAKADCLTKKEILRLKCRIMQEIESH-GIKIYPLPDCDSDEDEDYKEQVKQLKEAVPFAVCGANTLLEVKGKKVRGRLYPWGVVEVENPDHCDFIKLRT---------MLITHMQDLQEVTQEVHYENYRSDRLA...................................................................................................................................................................................................................................................................................................................................................................................................... 303
59 -11.000[O] KOG0448 Mitofusin 1 GTPase, involved in mitochondrila biogenesis  ali follow..  15  64..LSIIGEVLSRRHMKVAFFGRTSSGKSSVINAMLWDKV---LPSIGHITNCFLSVEGTDGDLVLVDSPGTTELDSWIDKFCLDADVFVLVANSEST--LMNTEKHFFHKVNEWLSKPNIFILNNRWDASASEPEYMEDVRRQHMERCLHFLVEELKVANALEAQ-NRIFFVSAKEVL...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 289
60 -11.000[J] KOG0468 U5 snRNP-specific protein  ali follow..  10  125.......MDTPPLIRNVALVGHLHHGKTTFVDCLIRQT-EQERGCSIKATPVTLDVKQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFID-----AAEGVMLNTERLLKHAQERQAITVCINKIDRLILELKLPPQDAYFKLKHIVEEVNGLLSTYGAPDDNLNVCFASSLYGFCFTLKSFAKLYADTYEGVAYLDFAKRLW------GDMYFNSKTRKFSKKQPHNSAQRSFVEFILEPMYKLIAQVVGDVDTTLSDTLAELNVRVSKEEMKSNIRPLLRLVCNRFMGDCSGFVDMCVEHIKSPLENA-------------RKVDHIYTGPKEGDIYRDMISCNQYGTLMVHSSKMYPNDDCTFFQVLARIVS----------------------TLHAGQEVRVLGENYTLQDEEDSRILQVGRLWVLNRVPAGNWVLIEGI-------------------------------QCIVKTSTIVDINVPEDLYIFRPLKFNTQSIIKIAVEPVNPSELPKMLDGLRKV-----------------NKSYPLLSTRVEESGEHVILGTG----LYLDCVMHDLRKMYSEIDIKVADPVVAFCETVVETSSLKCFAET............................ 681
61 -10.700[R] COG1163 Predicted GTPase  ali follow..  12  63...........TGVASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKGAKIQMLDLPGIIDGAKDVIAVARTCNLLFIILDVNKPLHHKQIIEKELEGVGIRLNKTPPDILIKKKEKGGISITNTVPLTHLGNDEIRAVMSEYRINSAEIAFRCDATVDDLIDVLEASSRRYMPAVLNKIDSLSIEELELLYRIPNAVPISSGQDWNLDELLQVMWDRNLVRIYTKPKGQIPDFTDPVVLRSDRCSVKDFCNIHKSLVDDFRNALVY---QYVGLSHILE.................................................................................................................................................................................................................................................................................................................................................................... 359
62 -10.700[J] COG0050 GTPases - translation elongation factors  ali follow..  10  1..MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTDNAPEEKARGITINTSHVEYDTPARHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDPQTREHILLGRQVGVPY------IIVFMNKCDMVDDEELLELVEMEVRELLSAYDFPPVVRGSALKALEGEAEWEAKIIELAGYLDSYIPEPERAIDKPFLLPIEDVFSISGRGERGIVKVGEEVEIVGIKDTVKSTCTGVEMFRKLLDEGRARGIKREDIERGQVLAKPGSIKPHTTFESEVYILSK............................................................................................................................................................................................................................................................................................................................................................................ 314
63 -10.600[T] KOG1487 GTP-binding protein DRG1 (ODN superfamily)  ali follow..  13  62...........TGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEGAKDVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIGFKKKDKGGINLTATCAETVKSILAEYKIHNADVTLRSDATADDLIDVVEGNRVYIPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWD----YLKLVRIYTKPKGQLPDYTSPVVLPYSRTTVEDFCMIHKNLIKEFKYALVW---QKVGKDHTLE.................................................................................................................................................................................................................................................................................................................................................................... 357
64 -10.600[J] COG0480 Translation elongation factors (GTPases)  ali follow..  10  1....MARINPLEKVRNIGIAAHIDAGKTTTTERILTDWMDQERERGITITAAAISTSWKDYQINIIDTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQ-PQSETVWRQADRY---KVPRIAFINKMDRTGANFYRVHEQMRDRLRANAIAIQLPI--SENDFKGIVDLVRKRAQGTDIEETDIPADLQDQVEEYYTKLVEAVAETDDDLMSKYFDGEPLTTIVPVLCGSAFKNKGVQLMLDAVVDYLPAPTEVPPIQGTLLAALAFKIMADPYGRLTFVRV----YSGVLKKGSYVLNATKVLMKADDRQDVEELRAGDLGAALGLKDTLTGDTITDEGAPVILESLPEPVISVAVEPKTKNDMDKLSKALQSLSEE-TFRVNVDPETNQTVIAGMGFKVEANVGAPQVAYRETIRKPVTNVEGKFIR-----SGGKGQYGHVVINL-EPGEPGTGFEFVSKIVGGVVPKEYIGPAEQGMKESCILAGYPLIDVKATLVHGSYHDVDSSEMAFKIAGSMALKEVLKASPVLLEPMMKVEVEVPEDYIGN-GDLISRRGQIESQSTEQGLAKVASKVPLATMFGYATDI........................................................... 656
65 -10.400[OK] COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase  ali follow..  12  2...........KRPLIIGVGGPVGAGKTMLIERLTRYLSTKGYSMAAITNDIYTKEDARILQLLFLESGGDNLSATFSPD----VDFSIYIIDVAQGEKIPRKGGQGMIKSD--------LFIINKVDLAPYVGAN--VEVMKADTLKSRGNKDFFVTNLKTDEGLKSVADWIEKRL....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 199
66 -10.300[DTZ] KOG1547 Septin CDC10 and related P-loop GTPases  ali follow..  15  272.....RKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISRK-TIEIKSITHDIEEKGVRMKLTVIDTPGQEEVNINRKKRIPDTRVCCLYFIPATGHSLRPLDIEFMKRLSKVVNIVPVI---AKADTLTLEERVHFKQRITADLLSN-GIDVYPQKEFDEDSEDRLVNEKFREMI--PFAVVGSDHEYQVNGKRILGRKTKWGTIEVENTTHCEFAYLRDL--------LIRTHMQNIKDITSSIHFEAYRVKRLN...................................................................................................................................................................................................................................................................................................................................................................................................... 548
67 -10.300[T] KOG1486 GTP-binding protein DRG2 (ODN superfamily)  ali follow..  11  60...........YGHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYNDTKIQLLDLPGIIEGASEVIAVAKSSDLVLMVLDASKSEGHRQILTKELEAVGLRLNKTPPQIYFKKKKTGGISFNTTAPLTHIDEKLCYQILHEYKIHNARENATVDDFIDVIEGNRKYIKCVYVYNKIDVVGIDDVDRLSRQPNSIVISCNLKLNLDRLLARMWDEMGLVRVYSKPQGQQPDFDEPFVLSSDRGGCTVEDFCHVHRTLVKDMKYALVW---QNCGLSQHLE.................................................................................................................................................................................................................................................................................................................................................................... 357
68 -10.000[J] COG4108 Peptide chain release factor RF-3  ali follow..  10  1MLMSTTPYFGEVSKRRFAIISHPDAGKTTITEKVLSDWMEMEKERGISVTTSVMQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDAA--KGVEDRTRKLMEVTRLR--DTPIVTFMNKLDREIRDPMELMDE----VENELKIACSPITWPIGCGKEFKGVYHIHRDETILYTSGQGHTIQEERIIKGLDNPELDQAVGADLAAQLREELELVL-------------------GASHEFDRELFLQGELT---------------------TALGNFGVDHMLDGLTQWAPSPMPRQAAERVVEASEEKFTFVFKIQANMDPKHRDRIAFVRI................................................................................................................................................................................................................................................................................................................... 322
69 -10.000[R] COG2262 GTPases  ali follow..  13  28..........................................................................................................................................................................................................................................QEFESLVSSAGVEALQVITGSRKAPHP-----KYFVGEGKAVEIAEAVKATGAS--VLFDHALSPAQERNLERLCECRVIDR-TGLILDIFAQRARTHEGKLQ--ELAQLRHLATR----------THLERQKGGIGLRG-----ETQLETDRRLLRNRIVQI-------QSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDV--------ADVGETVLADTVG--AAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEE-----AHEIPTLLVMNKIDMLED----FEPRIDRDEENKPIRVWLSAQTGGIPQLFQALTERL................................................... 361
70 -9.990[R] KOG0410 Predicted GTP binding protein  ali follow..  13  118.....................................................................................................................................................................................................................YLVGVERKGDGECLFNIEESLEELEQLADTAGLAVVGSTYQKLASPNP-----RTYIGSGKVAEIKSAINALDVE--VIFDDELSPGQLRNLEKAFGGDVR-DRTALILDIFNQRAATHEAALQ--ALAQMEYQLPR-------TRMWTHLERQSGGQVKG-----EKQIEVDKRILRTQIGVL-------KKELESVRKHRKQYRSRRVAIPVPVVSLVGYTNAGKSTLLNQLTGANVLAENRLFATLDPTTRRVQM--------QNGKEFLLTDTVG--AAFRATLEEIAESSLLVHVVDISHPLAEQQIEAVEKVMSE-----VSSIPKLVVWNKVDRVDDPQKVKLEAE-----ETGDTICISALTGGLDDFCNAVHEKL................................................... 472
71 -9.940[R] KOG1489 Predicted GTP-binding protein (ODN superfamily)  ali follow..  12  337...........KSIADLGLIGLPNAGKSTILNKIAKPKIGHWQFTTLSPTIGTVSLGFGQDVFTVADIPGIIQGASLDKRHIERSNGWVFVLDLSNKNPLNDLQLLIVGTLEKVKTK-NILIVCNKVDIDAEKSESFAKYLQVEKFSKSQEWDC-VPISALREKT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 499
72 -9.890[H] COG3172 Predicted ATPase/kinase involved in NAD metabolism  ali follow..  13  10...............TVAILGGESSGKSTLVNK-LANIFNTTSAWEYGRDYVFSHLGGDEIALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALI-VILLENNTPWVADGLRSL---------------------SSVDRKEFQNLLVEMLEENNIEFVRVEEEDYDSRFLRCVELVREMM............................................................................................................................................................................................................................................................................................................................................................................................................................................................ 183
73 -9.890[P] COG0370 Fe2+ transport system protein B  ali follow..  14  2.........................................................................................................................................................................................................................................................................................................................................................................................................................................SQNTYCILGNPNTGKTSLFNALTGSY---------EYVGNWSGVTVEKKVGTLRSKTGKLIIYDLNPISRDETVVTRFLEKFDCMLNIVDSS---------QIERNLNLTVQLLEYGAPVVMGLNMIDVAAGRGIHLNIQNLAKKLRIPILPVVARSGKGTEDILSTLSEKHVAP................................................ 164
74 -9.870[J] COG3276 Selenocysteine-specific translation elongation factor  ali follow..  12  1.................MIIVTSG-GKTALLKALTGTSTAHLPEEKKRGMTIDAYLPLENKVLGFIDVPGHEKFLSNMLAGLGGVHYAMLIVAADEVQTKEHLAILRQLQFHE-------IVVITKADRTNSAQIESLIQTIKQDYSFLRNAN-YFVTSAETGQGISELRHYLANLA----------ELADTQKPFRYAIDRVFSV-----TGTAFSGTVKKIRIKAIHAQNTSSEQGIAGQRLALNLNADLDRTPMKRGDWLLQNEPLPPTDRISVQILAEVPLNESQPVHI................................................................................................................................................................................................................................................................................................................................................................... 281
75 -9.680[R] KOG2203 GTP-binding protein  ali follow..  10  27FVKKTKLSDCGLSYAVVAIMGPQSSGKSTLLNHLFKTSFREMDAFAGRSQTTKARCVGIEPFTIAMDLEGTDGRERGEDDTTFEKQSALFAIAVAD------LINMWCHDIGREQAANKPLL---KTVFQVMLRLFSPRKTTLLFVIRDKTKTPIELLERALREDIQKIWDSVRKPEAHKNTPLNE----------------------------FFNVMIVALSSYEEKEKQFEQEVAELRQRFFHSISPGGRRGVVPASGFSFS---------SQQIWKVIKE---NRDLDLPAHKVMVATVRCEEIANEKLRD............................................................................................................................................................................................................................................................................................................................................. 302

FFAS is supported by the NIH grant R01-GM087218-01
1 3 3 6 9 0   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.