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Query: [E] KOG2844 Dimethylglycine dehydrogenase precursor, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIGHRLARWRWARSYTTAVANADVVVCGGGISGTSIAYHLAKRGKKVALVEKDSIGCSGATGLSAGLVSSPIFWQDTSLQAIAQASLDLYSHLATTCKFRYIKCGRTYLASSMANEILLRRMYSRGVVHNDKVELLDCQSEMLERWPFLQTEDVQLALFSPEDVALDPVALCQHLALIAKDYGALIYESNPVLEVHIGDEKQVYGVSTKMGFIETSHFVDAAGIWAGSHLVKALPHQHVQTAAYPCTYSYIHTSKLPTGSVSDMTPIFNDLDGNVMLRTTSFKTLCAGFAEESIRPLARQTGSATPWQHPEPDWNTFGMALRFTAGRQFYKTAYHPNLEKLISRCPMLGDCNHGDLIVGMEAYTPDKLPTIGESSQAKGYWVMCGMNGQGLSLAGGLGKILGELMCESQSSTADVARVDVGRFIDLHANNQYLIGRTPEVAALTYSNLYHSHQCHTARNLRMAPIYHQLRDAGAVFGEIMGYERPLWFEKTPKTERNALMSGQDALIGKPEWFERVASEYEACRERVGLMDMSSFSKYDITGEDAVEYLQFLCSANVDEPIGTTVYTGMQHQKGGYVTDCTLSRLGEKKFFMVAPTIQQERVLVWMKKWQAILKARVHVQDVTGAYTALDLIGPSSRYLMGDITGLSMSSNDFPTFRCQEINIGMATGIRAISVTHCGELGWVIYVPNEVAQNVYEKILDAGKEYSLQHAGYYTLRQLRIEKFYVYWGQDINATVTPVECGRLFRVDFKKDFIGKKALEEQVERGVSKRFVQLLVDGHDKETDPWPQGGETILKDGRAVGLTTSAAYGFTLGCQVCIGYVENKEFGVSPEFVSSGHFEIDIAGKRFTCRLNVHSPSLPMISSEHPLHYRPTQLast
1 -272.000[E] KOG2844 Dimethylglycine dehydrogenase precursor  ali  100  1MIGHRLARWRWARSYTTAVANADVVVCGGGISGTSIAYHLAKRGKKVALVEKDSIGCSGATGLSAGLVSSPIFWQDTSLQAIAQASLDLYSHLATTCKFRYIKCGRTYLASSMANEILLRRMYSRGVVHNDKVELLDCQSEMLERWPFLQTEDVQLALFSPEDVALDPVALCQHLALIAKDYGALIYESNPVLEVHIGDEKQVYGVSTKMGFIETSHFVDAAGIWAGSHLVKALPHQHVQTAAYPCTYSYIHTSKLPTGSVSDMTPIFNDLDGNVMLRTTSFKTLCAGFAEESIRPLARQTGSATPWQHPEPDWNTFGMALRFTAGRQFYKTAYHPNLEKLISRCPMLGDCNHGDLIVGMEAYTPDKLPTIGESSQAKGYWVMCGMNGQGLSLAGGLGKILGELMCESQSSTADVARVDVGRFIDLHANNQYLIGRTPEVAALTYSNLYHSHQCHTARNLRMAPIYHQLRDAGAVFGEIMGYERPLWFEKTPKTERNALMSGQDALIGKPEWFERVASEYEACRERVGLMDMSSFSKYDITGEDAVEYLQFLCSANVDEPIGTTVYTGMQHQKGGYVTDCTLSRLGEKKFFMVAPTIQQERVLVWMKKWQAILKARVHVQDVTGAYTALDLIGPSSRYLMGDITGLSMSSNDFPTFRCQEINIGMATGIRAISVTHCGELGWVIYVPNEVAQNVYEKILDAGKEYSLQHAGYYTLRQLRIEKFYVYWGQDINATVTPVECGRLFRVDFKKDFIGKKALEEQVERGVSKRFVQLLVDGHDKETDPWPQGGETILKDGRAVGLTTSAAYGFTLGCQVCIGYVENKEFGVSPEFVSSGHFEIDIAGKRFTCRLNVHSPSLPMISSEHPLHYRPTQ 872
2 -98.700[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase)  ali follow..  24  1..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TALHAWHVKNGAEFEDVGQWKRPWYFPRRGED-----------------MHAAVARECRAVREAVGLLDASTLGKIDIQGPDAREFLNRVYTNAWTKDVGKARYGLMCKEDGMVFDDGVTACLADNHFVMTTTTGGAARVLEWLELYHQTEELKVYFTSVTDHYATLTLSGPNSRKLLAEVTDIDLDKDAFPFMTWKEGKVA-GVPARVFRISFTGELSYEVNVQADYAMGVLEALAEHGAKYGLTPYGTETMHVLRAEKGFIIVGQDTDASVTPDDLNMGWAVGRSKSWIGWRGMNRADCLRERKQLVGLRPSNP----QEVLPEGAQLVFDMKMVGHVTSSYMSASLGHGFALAVVKGGLKRMGQK------VYAPLAGRFIEAEICSSVFYDPKGERQNV....... 388
3 -95.200[E] KOG2770 Aminomethyl transferase  ali follow..  19  5............................................................................................................................................................................................................................................................................................................................................................................................................................................SLWQLGQSITRRLAQSDKKVVSRRYFASEADLKKTALYDFHVAHGGKMVPFAGWSMPIQYK------------------------DSIMDSTVNCRENGSLFDVAHMCGLSLKGKDCVPFLETLVVADVAGAPGTGSLTVFTNEKGGAIDDSVITKVTDEHIYLVVNAGCRDKDLAHIEEHMKASKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKEDLSK--LYFGNFQILDIN-GSTCFLTRTGYTGEDGFEISVPDEHAVDLAKAILEKSEG-KVRLTGLGARDSLRLEAGLCLYGNDMEQHISPVEAGLTWAIGKRRGFLGADVILQQLKDGPTIRRVGFFSSGP-----PARSHSEVHDESGNKIGEITSGGFSPNLKKNIAMGYVKSGQHKTGTK------VKILVRGKPYEGSITKMPFVATKYYK.......... 406
4 -54.200[R] KOG2852 Possible oxidoreductase  ali follow..  14  1.................MSNSRNIVIVGGGITGVSCLYFLAHHPSFNITLFESAGIASAASGKASGFLSLE--WHGPSTSSLAALSYNLHKELSDQNKWGYRALDTWSIKADENCQQPDKLPEGIEWIAPSIVENVT-RLGNKKNSGQVHPYKF-CHAIYEEASKVANVTLVKGHVLSVDENEVEYRLIGDDYAPDEEEEITSAEELHTIHSMEATHIIVAAGPWTPQLIP--------NLRISGARIHSITIDLPIKLNGNAVFSEITYKDGTEFYAREDELYVCGEFDDEPLP--------------------------ELSSDTKVDQDKCALIKQCANHFHQIIRDSPVKVRQACYLPISATGAPVIGKIGS--SIYVAAAHGCWGITLGPGTGKVLSELILDGAVTSANIDLLDPEGSLE............................................................................................................................................................................................................................................................................................................................................................................................................................................................... 382
5 -41.000[E] COG0665 Glycine/D-amino acid oxidases (deaminating)  ali follow..  17  2......................RVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANAGQISPGYAAPKGRMVRLAEYSRDCLKALETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDAGVPYQLLE-SSRLAEVEPALAEHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKFRFNTPVDQLLC-DGEQIYGVKCGDEVIKADAYVMAFGSYSTAMLKGIV-----DIPVYPLK--YSLTIPIAQEDGAPVSTIL-DETYKIAITRFDNRIRVGG------------------------------MAEIVGFNTELLQPRRETLEMVVRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRTR-FKNLWLNTGHGTLGWTMACGSGQLLSD-LLSGRTPAIPYEDLSVARYSRGFTPSRPGHLHGAHS................................................................................................................................................................................................................................................................................................................................................................................................................................................ 432
6 -39.100[R] KOG2820 FAD-dependent oxidoreductase  ali follow..  14  2.................VGKAYDVIVVGAGIFGSCTAYHCQRLGLR-TLLLEQYSLSNGSSHGKSRIIRYA--HTDPEYVPLVGDSYLQIEELEKKRGEKWNKLGLLWAATGNQ----VDSISGHLKKHNIDHEVLP-GTKITERYPQFKFDDKWTALIDPMGGVIYANKWLKAFQEEFITLGGTIQDNEPVISYGE-TDNVIVNVKTSTGEYKTNKIIFTVGCWITKF----FPNVNFQIKPISLAVCYWNAKD----EKNNHLLDEKHFPVVIAKNLEKKEYFFALPDTDYPGAIKLVLDEGDDLA------------------------------LSHPTKNNQELVTIPGSFIKDHIPNSPDHHYLIGPVSSENSKILVGGFVGAGIFGSCTAYNCQK----------------------------IGLKTLLLEQFELGHKNGSSHGKSRITRYAHTEVEYVDLVGDA-----------------------------------YNQIFELERIRGEKLWKKTGLLWVSTGNEVEKIHTNLKLK-EVIKGTEVGKRYPQFKWNGLIDPMGGVIADKWLNAFRD----EFKKIGGIIHDREIVLS-HSEISNNLFVTTNKSRYKIIFTVGCWITKFLPDL----------------------KFNIEPISISVC----WKTKNESDLNEDHYPVVIAQEMDLQVFHYSLPDTDYPGSMKFCYHFGDALTQDLAHPAQRSQRCIDLPAKFIQKYMPVVDGSAPTRIDKCIYTNSDDHYIIGTIPTKNPNILVGGCGSGS--GFKVAPGIGKALA-------------EMAAGKKTTVDVANRFKPSKI...................... 703
7 -33.900[E] COG4583 Sarcosine oxidase gamma subunit  ali follow..  4.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................PKTDFKSGFRPALRPVLGAKAAIASAAIKLSPLPEGAIHVLASPDASDMEARLRSLGKGDVRAVSPGQWFIVGEQPLSGVDMKTLLAALEP---QAAGVDQSQGRVRIRIEGKMTERVLAKGTAVNLSLATFPVGRSAATLIGH-IAAHITR---IDISAFEIIVLRGFAESLWDDLVRMSLEFN...................................................................................................................................................................... 182
8 -30.800[R] COG0579 Predicted dehydrogenase  ali follow..  12  2..............AQNDHETVDMLLVGAGIMSATLAVLLKELD-LKMEVVELQEIESSNPWNNAGTGGSIDIKKAVGINTMFEVSKQFWSHL-GSPKTFINPVPHLSFVRGSEGIAYLKKRFESLTKHHAFETMVYSKATLAEWMPLMPADEAIAATRVEGGTDVNFGALTNQLLQHLQQPGAQIRYNQKVTHLRRADNGVKDTRNGGDREIQARFVFLGAGGGALPLLQLSGIPEGKGFGGFPVSGQWLRCDNPEIVKQEVGSPPMSVPHLDTRVVDGKKSLLFGPYKFLRHGSFLDLPLSVRPGNILPMLSVARDNMDLTRYLIGQVMQSPEQRLEALRKFYPEARAEDWRLEVAGVQIIKKDPKKGTELVAAHDGSIAALLGASPGASVTVSIMLGLIERCFPEQARSPE.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 458
9 -25.500[R] COG0354 Predicted aminomethyltransferase related to GcvT  ali follow..  19  1..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MMTASKTVNLSYRALVHITGEEAEKFLQAVITTNLDQGPHELKPGALLTPQGKILFDFLVSR-IEGGLRFDLPADVAGDFVKRITLYRLRA--KAEIVQVPESLVSVCWQGDSPASDNDSIKRDS-----------------------------FPAQLNVLRLYHQ----------------ASANAGLDAWVQLRAEYGIAEGEADFAYGDVPHDVNFDQTVSFPKGFIGQEVVSRMQHRGTRRRVLIARSDVP------LPPMGTPITVEGREIGAMGSSASQIGLA--VRIDRVKDAMDTGNSILAGDAAITL................................. 269
10 -24.900[K] KOG2929 Transcription factor, component of CCR4 transcriptional complex  ali follow..  13  21.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................IHSGLEDAGPMASRLKSRSVVRFSGPDTVKFLQGLLTNDVRRVTNPPMYAALLTPQGRFLYDFFLYSPSRPDEKLDRTGSGPGSDSGRDGSVE----ADVDVDVLDELLETLKKYRLRSKVDIENVAEE-----------------------FSCWQRYGRNLTGSSSVGWGGGVDRAAPLVEADKE-----TDESNYLLWRLEHGVAEGSAEIPKGEAPLEYNFVGLISFDKGYVGQELIARTHHRGIRKRLIPLRFIDSNKELNQKIAAGAEVVGTGKKMGTVSTAL------GSRGMGVMR-------VEEAFKPSAELAVKDSEELKKIKLDRGFCTGKQQARSFHCIP.. 360
11 -22.900[C] KOG0042 Glycerol-3-phosphate dehydrogenase  ali follow..  11  50.VNREPPSREAQLLTLQNTSEFDILVIGGGATGSGCALDAVTRGLK-TALVERDDFSSGTSSRSTKLIHGGVRYLQKAIMKLDIEQYRMVKEALHERANLLEIAPHLKWWQLPYYWVGIKLYDLVAGSNCLKSSYVLSKSRALEHFPMLQKDKLVGAIV--YDGQHNDARMNLAIALTAARYGAATANYMEVVSLLKKTDPHVSGARCKD-DVRAKCVINATGPFTDSVRKMDDKDAAAICQPSAGVHIVMPGYYSPE---SMGLLDPATSDGRIFFLPWQKMTIAG-------------------------TTDTPTDVTHHPIPSEEDINFILNEVRNYLSCDVEVRRGDVLAAWSGIRPLVTDPKS--ADTQSISRNHVVDISESGLITIAGGTYRSMAEDTINAAVKTHNLSPTLYIRLVQDYGLESEVAQHLAATYGDKAFEVAKMASVTGKRWSRRTRL-EALPRIVELMGRELNWDDYKKQEQLETARKEMGYKSRSEQLTDRSEISLLPSDIDRYKKRFHKFDADQKGFITIV--DVQRVLESINVQMDENTLHEILNEVDLNKNG---------QVELNEFLQLMSAIQKGR............................................................................................................................................................................................................................................................................... 695
12 -22.100[C] COG0578 Glycerol-3-phosphate dehydrogenase  ali follow..  12  2...................ETKDLIVIGGGINGAGIAADAAGRGLS-VLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFE--SDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTSWQARGLVNATGPWVKQFFDDGMHLPS-PYGIRLIKGSHIV---VPRVHTQKQAYILQNEDKRFVIPWMDEFSIIGTTDVE---------------------------YKGDPKAVKIEESEINYLLNVYNTHFKKLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKRKLAEHALE................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 367
13 -19.800[E] KOG3923 D-aspartate oxidase  ali follow..  10  8...........LFGGVSTVSSLRVAVVGEGVIGLSTATAILDLAEKRNIPAPEHKPFEKILSRHIAGLFRID-SGSEIDRKYGYDTFEKLATLEYGGLSGVQLVSGHILSDSKTKLDS--QRESYGSLVYNYRDLAEPELFGPTSLFDLPRNTTTRGIHYTA--TSEGLRFCPFLKKELMTKGVRFTQR-RIGNLEELGA-------------EFDVVVNSAGLLGGVLAGDDAG------NMKPIRGVLIRVDA-------PWQKHFLYRDFSTITIPVIDHVYMGT-----------------------------VKQEGAFGPNNVTSADIQDITSRYVALQPSFKRVHMLSSFVGYRPGRKQVRIRETNGSKKFTVVHNYGHSGNGFTLGYGSAVHAAHIVLD................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 354
14 -17.800[R] COG2509 Uncharacterized FAD-dependent dehydrogenases  ali follow..  11  1.................MEQKFDVVIIGAGPAGLFAAYELVERSNLKVLIIDEGGDVDQRVCPMYELGYCIGCKPCHIMSGVGGAGGLSDGTVNLRPDIGGDLTELTNDENYSWQL--VWEVDQILLRHEAPRNLYKGDPEQIKYWERKAAQAGVKFIPIIQRGSDNTPKVIKSIKNYLESKGVKFLLWTKALEF--NKGWVKVQRGKDVFTIEAKYIIVAPGRGGAEWFHEVAKKIGLKARHGPVEVPAIIMEPITSINHDPKFHIYTDPYGFVVEERYDSYVGVNGHSMREKKSNNTNFASRIRKSDVEPTLKHVTPGDIAMALPHRVVTNIIEGLERLDKVIPGVASDHTLLYAPEIKYYAMRVEVNELLETSIENVFAA----GDGAGLSRDIVNAAATGIMAARGILVKEGLYNLKDFKKPGNWKEKIEALEPE................................................................................................................................................................................................................................................................................................................................................................................................................................................. 483
15 -17.500[Q] COG1233 Phytoene dehydrogenase and related proteins  ali follow..  16  2................AVTQTRDAVIIGGGHNGLVCAFYLAKAGLK-VTVCEARGVVGGAA--HPGFRNSVASYTVSLLNPRVIADMGLFLERPISNFLPISDDKYIKLGGGLERTQEEFRKYSRRDAEVLPRDVLDGWFESEPVKAAFGFDAVVGAWGHAVGGM---GAITQAMAKACEAAGVEILLDAPVEAVHI-DGGKAAGVQLVDGRIMAPIVSANVNPALLYKKLVPPSALTMNVALSELPSFTCLPGKETAEHHQSGIVIAPSLD---YMDAAYRDAKGQGISKAPIVEML--IPSSLDTSLAPPGQHVASLFCQQFAPELPDGRSWDDAREAAADLIPGFKASVLGRMILSPLDLERKFGLIGGDRAPIAGLYMCGAGTHPGGGVSGNPGRNAAREILRDKDFATAVKLSVVGR.................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 543
16 -17.200[H] KOG4254 Phytoene desaturase  ali follow..  12  4...........RSFSTLPKKKWDAVVIGGGHNGLTAAAYLARGGLS-VAVLERRHVIGGAAFSRCSYLQGLLRPCIIRELELGRHGLK-LLKRSPSSFTPCLDGRYLLLGPDQDLNHSEISKFSKHDADAYPSKVLNNWFESDVLKASLATDAVIGIWSYVEGGM---GSVSMAIANAAKEAGAEIFTNAEVSEILTEDSSIVKGVLLADGTVESSAILSNATPYRTYVELVPTNVLPINLAVDKLPQFQCCNTNHSGPGPEHFGTIHIGAESMDEVHSACHDSENGLPSRRPSTLDNTISPPGKHVINLFIQYTPYKPSDGSWEDPTYREAFAQRCFKLIDEYAPGFSSSIISYDMLTPPDLEREIGLTGGNRSPLKGLYLCGSGAHPGGGVMGAPGRNAAHVGTNN................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 552
17 -17.100[A] KOG3322 Ribonucleases P/MRP protein subunit  ali follow..  12  23.............................................................................................................................................................................................................................................................................................................................................................................................................ARFIEVESPALSNGAVDLKKFIESRSFEITALQDAMKRSKESSAQRAFQLPRCLRRRAASHNIKRIPKGLRDRALYEM-QLRKVWPTHLWVCKR--------HMINAWGYAIPEKPTEKSYRPAAFRKDAIAFDMSYEPLFCISGPALKEKFGNSFANGLPPVFSSRSFTSYLVKSDELICPCFLQPTECVQLVIRLHPSAFLQAWNYLSGIAVLDD-RIAMHDWRLDLASFDIHGPDSNIMLHKVFDSNYSSACLPMGASISVKASEKEVIPVYITYRKEWNGLTVILPWDYAKFVWRKMMYQK---GIRFGGLENLHQIAFEKRMPFFPIDYPDTISPPAKRVNYQVQVQLVQRGSLQDRARIYCLSDDELSKWKTIIYKENLTAENLLYPKCPNETAIIGFVTTGNFNLNAGKPSGIANVLAKIRNVGCSVPRLAQWKF................................. 694
18 -16.400[R] COG3573 Predicted oxidoreductase  ali follow..  14  1.................MADDADVIIVGAGLAGLVAAAELAEAGKK-VIIVDQEPSLGGQAFWSFGGLFQRRMRIRDSHDLALEDWMGTAAFDRPEDFWPRKWAEAYVGFAAGEKRSWLIER-------GLKFFPVVGWAERGGGNAIGHGNSVPRFHITWGTGPGVLEPFVQRVREAQKRGLISFKFRHRVNEL-TRAGDVVTGVRGDVLELHAQAVIVASGGIGGNHRLVRE.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 235
19 -15.800[I] KOG1298 Squalene monooxygenase  ali follow..  13  26.MKKKATDLADTVAEDQKDGAADVIIVGAGVGGSALAYALAKDGRR-VHVIERDMREPER---MMGEF-------------MQPGGRLMLSKLDCLEDIDAQKATGLAVYKDGKEADAPFPVDNNNFSYEPSARSFHNGR------------------------------FVQQLRRKAFSLSNVRLEEGTVKSL-LEEKGVVKGVTYKNKTALAPLTVVCDGCYS-----NLRRSLNDDNNAEIMSYIVGYISKNCRLEEPEKLHLILSKPSFTMVYQISSTDVRCGFE----------VLPENFPSIANGEMSTFMKNTIVPQVPPKLRKIFLKGIDEGAHI------KVVPAKRMTSTLSKKKGVIVLGDAFNMRHPVVASGMMV-LLSDILILRRLLQPLSNLGDANKVS.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 376
20 -15.100[C] COG0644 Dehydrogenases (flavoproteins)  ali follow..  13  1.................MTEQYDVVVAGAGTAGAYASYLLAKAGLK-VALLESKSGD----------------------------------------QIGVKTCGDGLGLHHVERMSKYLTPNPKVFQNKIEGVELISPDQKTTL------------IVRGEGYVLDRFAWGKWLVEEAVRAGAVLYEGHTATAPIV-ENGSVVGVKAVAKEFRARVVIDSTGSAAVLRSKLIGWLVSEPLHPEDVSHAYREIIYSEEPLENPQYIKIY--------------------------LDMVVAPGGYWWIFPRNATMLNVGLGIWGILKQNPRINYEKFILPKFKVRGKYHIGGGFIPTRRPKSLVGNGIVALGDAAAAVNPIHGGGIGQ-ALLTAELSSKVITKAFEKGDFSEKTLWEYNVL................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 330
21 -14.800[S] COG4716 Myosin-crossreactive antigen  ali follow..  9.......EAFATPRKPEGVDQKSAYIVGTGLAGLAAAVFLIRAGER-IHLFEELPLAGGSLDGIEKPHLGFVTRGGREMENHFECMWDMYRSIPSLEIPGASYLDEFY-SLGDQTIEEFFSEDFFKSNFWVYWATMFAFEKWHSAVEMRDFTSLKFNKYNQYDSMVKP------IIAYLESHDVDIQFDTKVTDIQVEQTAVAKTIHMTVSGEAKAIELTPDDLVFVTNGSITESSTYGSHHEVAKPTKALGGSWNLWENLAAQSDDFGHPGGIITITDSNWMMSFAIHRQPHFKEQKENETTVWIYGLYSNSEGNYVHKKIEECTGQEITEEWLYHLGVPVDKVPVYMPYITSYFMPRVKGDRPKVI-----PDGSVNLAFIGNFAESPTEYSIRTAMEAVYSFLNVERGIPEVFNSAYDIRELLKAFYYLNDKKAIKDMDLPIP-------KIGHKKIKDTFIEELLKDANLM............................................................................................................................................................................................................................................................................................................................................................................................................. 590
22 -14.800[HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases  ali follow..  11  2....................RTQVAIIGAGPAGLLLGQLLQRSGIDAVILETRSRQYVEERIRAGV---------------LEQGTVDTLNEA-----------GVGERMRREGLVHHGIDLLFEGKRHRLDLTALSGGRSIT---------------------VYGQHEVVKDLIAARIGQGAPLLFEVSEVSLHDLESATPSVRFVHEGTLHCDYIAGCDGFHGICRPAIPAQRQAVFERVYPFAWLGILAEAAPA------------ADELIYASHARGFALFSMRSPKITRLYLQCKP------------DENLAEWSDARIWDELHTRLENNDGWHLKEGPILQKSVTPMRSFVCETMRHGRLFLAGDAAHIVPPTGAKGMNL-AVADVRVLAQALTARYRQNDTAQLDGYAERCLQRIWRAEHFSWWMTSMLHRFDDHTPFMQRLQHAELEYLTTSLAAARTLAEN................................................................................................................................................................................................................................................................................................................................................................................................................ 384
23 -14.600[C] KOG2415 Electron transfer flavoprotein ubiquinone oxidoreductase  ali follow..  11  50..PRDKDKRWEGVNMERFAEEADVVIVGAGPAGLSAAVRLKQLDIR-VCLVEKAAQIGAHTLSGACL-----------DPGAFKELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNY---------------------------------IVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATNDVELHAKVTIFAEGC-HGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKNWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLVALGLVVGLDYQNPYLSPFREFQRWKHHPSIRPTLEG--GKRIAYGARALNEGGFQSIPKLTF-------PGGLLIGCSPGFMNVPKIKGTHTA-MKSGILAAESIFNQLTSENLQSKTIGLHVTE................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 434
24 -14.300[C] KOG2404 Fumarate reductase, flavoprotein subunit  ali follow..  2...................SLSPVVVIGTGLAGLAAANELVNKYNIPVTILEKASSIGGNSIKASSGINGACTETQRHFHIEDSPRLFEDDTIKSAKGKGVQELMAKLANDSPLAIEWLKNEFDLKLDLLAQLGGHSVAR-----------------THRSSGKLPPGFEIVSALSNETKPELVKINLDSKVVDI-HEKDGSISAVVYEDKNVSANDVVFCSGGFGFSKEMLKE.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 209
25 -14.200[H] COG1635 Flavoprotein involved in thiazole biosynthesis  ali follow..  15  24...................TDIDVALVGGGPANLVAAKYLAEAGVK-VALYEQKLSLGGGMWA-----------------------------------------GGMMFPRIVVQ---------------------------EEATRILDDFGIRYKEYESGYYVANSVESVGKLIAGATSAGAEVFNLVSFEDIMIRENDRVTGIVIDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGELGLL................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 194
26 -13.900[H] COG1232 Protoporphyrinogen oxidase  ali follow..  15  2.............GGGRMGQHVETLVIGAGPAGLTTAYTLAKAGRGVTVLEMDETYVGGRTVDYKGFKFD---IGGHRFFSKSQEIVDLWNEILPDDFIDRPRLSRIYYAAPTTFHQWVRNQFGTEKVWGMSCDEISADWASQRIKGLDLGAAIIDGFRYPRKGP---GMMWEACADKVMALGGDVRMGRKVDGLHFDKIAKLWTVAVRKEIYTADNVVSSAPI........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 284
27 -13.800[S] COG3349 Uncharacterized conserved protein  ali follow..  14  2......................RVAIAGAGLAGLSCAKYLTDAGHT-PIVLERRDVLGGLVAAWKDSDGDWYETGLHAFFGAYPNMLQLLKELGIEDRLQWKEHTLIFNQPDKPGILRNNDMLTWEQKIRFAIGLLPAIVRGQKYVEEMDKIAASKALTFINPDEVSSTRLCQPIVDYITERGGEVRLNAPLKEILLNPDGTVKGFLEPDEVITADFYVSAM.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 273
28 -13.000[R] KOG2960 Protein involved in thiamine biosynthesis and DNA damage tolerance  ali follow..  10  54IRESTVSRAMTRRYFSDLDKESDIVIVGAGSAGLTAAYYIGTRDLK-IAIIEASVAPGGGAWLGGQLFSAMVVRKPADLF-LNEIGVPYEDEGSTVMARTLALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNHGLQSCMDPNTINAHLVVSATGHDGPFGAFCVKRLASAQLVSNLHDMRPLDMNRAEDLIVKGTREVFPGMIVGGMELSEFDGANR---------------MGPTFGGMMFSGIKAAQEALAIFD.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 318
29 -12.700[E] COG3075 Anaerobic glycerol-3-phosphate dehydrogenase  ali follow..  12  2....................RFDTIIMGGGLAGLLCGLQLQKHGLR-CAIVTRGQ---SALHFSSGSLDLLSHLPDGQAVTDIHSGLESLRQQAPAHPYSLIAESGAQLQGSVELPHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDMILMPA--SVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTC-KNGVVNEIWTRNHPLRPRFAVLASGSFFS--GGLVAERNGIREPILGLD................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 334
30 -12.500[HC] KOG3855 Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis  ali follow..  33VSTSCSNESNALNNSTDDGPQHDIAIVGGGMVGIALAASLASKPLTKVAIIDNNPLLGRRNIIEKGHQPDPRVSTVTPATISFLKDIGAWKYIEQQRHAYFDKMMLMMYIKMFWGKHIAIYICILDDV-----------NSCVLIVDMIQESDLQKTVY---------PARLNAMDMLPSSSLTGLGEVPSTTDLFMRGRLAKLELSDGN-RVYAKLVVGADGSKSRKTTGWNYSQNAIICTVEHTAENYTAWQRFLPNGPIALLPIGDKFSNIVWTMDPKEASDRKLMNEDD---FIKAVNDALDSGYGPNPETTSSRDSLSWLTGDATISAKERFETPPKVVKLSSERMMFPLSLRHAKDYVSKRVALVGDSAHTVHPLAGQGVN--GFADACALSKAIAEGIALGTD-----EANLLKRYEAERKPANIAMMAVLDGIQKMYSLDFG--PLNALRAAAFHGAHYISPLKKRIISYASG....................................................................................................................................................................................................................................................................................................................................................................................................... 501
31 -12.300[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit  ali follow..  11  7....................EFDAVVIGAGGAGMRAALQISQSGQT-CALLSKVFPTRSHTVSAQGGITVALGNTHED-----NWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTG------------HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTAEVVYFKARATVLATGGAGRIYQSTTNARAGVPVPTGIAGAGVLVTXGCRGEGG-----YLLNKHGERFMER---------YAPNAKDLAGRDV---VARSIMIEIREGRGCDGPWGPHAKLKLDHLGK--EVLESRLPGILELSRTDPVKEPIPVIPTCHYMMGEDVVVPGLFAVGEIACVSVHGANRLGNSLLDLVVFGRAAGLHL......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 419
32 -11.200[C] KOG2403 Succinate dehydrogenase, flavoprotein subunit  ali follow..  10  37...........PAKYHIIDHEYDCVVVGAGGAGLRAAFGLAEAGYK-TACLSKLFPTRSHTVAAQGGINAALLGDQDAIHYMTREAPKSVIELEHGMPFSRTEDGRIYQRAFGGQSKDFGKGGQAYR--------------------TCAVADRTG------------HAMLHTLYGQALKNNTHFFIEYFAMDLLTHNGE-VIAYNQEDGTFRAHKTVIATGGYGRAYFSCTSARAGFPLPSGIYGSGCLITEGARG-----EGGFLLNSEGERFMERYA-------------PTAKDLASRDVVSRAITMEIRAGRGVGKNKDHILLQLSHLPP--EVLKERLPGISETAAVDVTQEPIPVLPTVHYNMGEDKVIPGLMACGEAACVSVHGANRLGNSLLDLVVFGR-----AVANTIADTLQPGLPHKPLASNIGHESIANLDKVRNARGSLKTSQIRLN-MQRTMQKDVSVFRTQDTLDEGVRNITEVDKTFEDVHVSDKSMIWNSDLVETL--ELQNLLTCATQTAVSASKRKESRG.......................................................................................................................................................................................................................................................................................................................................... 577
33 -11.000[O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB escort protein)  ali follow..  13  1.................MDEEYDVIVLGTGLTECILSGIMSVNGKK-VLHMDRNPYYGGES-WNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIKVPSTETEALASNLMGMFEKKFDLGQDVIDCLETVNRIKLYSESLARYGPYLYPLYGLGE---LPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRIICILSHPIK................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 309
34 -11.000[C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes  ali follow..  12  1.................MTKHYDYIAIGGGSGGIASINRAAMYGQK-CALIEAKEL--GGTCVNVGCVPKKVMWHAAQISKLIASRTAYIDRIHTSYDNVLGKNN-VDVIKGFARFVDAKTIEVNGETITADHILIATGGRGIDSDGFFALSALPERVAVVGAGYIADPMISETLVEVMNAEGPQLHTHAVPKAVVKNADGSLTLELEDGRSETVDCLIWAIG--EPSTDNINLAAAGVKT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 279
35 -10.800[Q] KOG0029 Amine oxidase  ali follow..  11  19...........TDEKMKKKRSPSVIVIGGGMAGISAARTLQDASFQVVVLESRDRIGGGASWGRLGLPLYRTSGDNSVLYDHDLESYALFDKAGNQVSQELVTKVGENFEHILEEICKVRDEQDEDMSIAQAFSIVAADAETISAKCWDQEELLPGGHGLMVRGY---RPVINTLSK-----GLDIRLSHRITKISRRYSG--VKVTTEKGDFVADAAVIAL-----PLGVLKSGMITFE-PKLPQWKQEAINDIENKIILNFDNVFWPNVEFLGVVAETSYGCVLVYMPAGQLARDIEKKSDEAAANFAFSQLQKILPDASSPINYLVSRWGSDINSLGSYSYDIVNKPHDLYERLRVPL----DNLFFAGEATSSSYPGSVHGAYSTGVLAAEDCRMRVLE..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 464
36 -10.500[O] COG5044 RAB proteins geranylgeranyltransferase component A (RAB escort protein)  ali follow..  17  2.............DQETIDTDYDVIVLGTGITECILSGLLSVDGKK-VLHIDKQDHYGGEA-WNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYVPANEIEAISSPLMGIFEKKFGLGNSTKEARPSFERILLYCQSVARYGPYLYPMYGLGE---LPQGFARLSAIYGGTYMLDTPIDEVLYKDTGKFEGVKTKLGTFKAPLVIADPT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 295
37 -10.400[H] COG0029 Aspartate oxidase  ali follow..  10  6............SKHEIRDMKFDVLVVGEGLAALTLLLHLPPSL--KIGVISRNKYDEPSSYWAQGGISAVFSTDD-------DHDKHIRDTLLAGDGLCDEAAVRQIVCEGGDVLRWLID-------QGVDGEIHLTREGGHSERRVAHVDDMTG------------RGIMRALQAKVAQLNVIWIRQYEAVELLSDGQA-VIAESLADGEFSAPTVVLAAGLYQYATNPHASKGEAIAMAWRAENLEFVQFHPTAFQIEGRVISLITEAGEGGLLYNVANERFMPGYSSQQELAPRDVVARAIYSEMQAHGTSHVWLDITHQGT------------AFVEQHFPNLVEITRAHGCDHRVPVSPAAHYTCG-RTNIEGLYAIGEVANCGLHGANRLANSLLECVVMGKACAQSV......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 400
38 -10.200[CR] KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases  ali follow..  10  2................EAESTQDIIIVGAGISGLATALGLHRLGIRSIVLESSEQLRA-----GFAL-------------SLYFNAWKAMEALGISQHIRSLGDRFQGWVVRPISAGDPPKEMLFPESEEYEVRCVQRKL------------------------------LLDALAGELPQGTIRF--SSKLVHIELSGHYKM--VHLSDGTLKTKVLVGCDG-----VKSVVGKWLGFKNPVKTSRVAIRGIAHFQTGHELGRR----------FFQFYGNGVRSGFISCDQNTVYWFLTHTSTDLDKKNHQKIKQFVLTKIKDLPDNIKSILETTDLDSLVMNPLMYRPPWELLWA---NIAKDNVCVAGDA-----------LHPMTPDIGQGGCSAMEDGVI-------------LARCLGEAMKAKNMKGETEDENESYRRIEDGLKKYAGSRKWRSIDLITTSYTVGFIQ............................................................................................................................................................................................................................................................................................................................................................................................................ 369
39 -10.200[R] COG2907 Predicted NAD/FAD-binding protein  ali follow..  14  2...ASVALALWERVLANVVPRQSIAVIGAGVSGLSAAWLLSHRH--DVTLYEADNRLGGHANTIIGFIVYNEPNYPNLTALFRHIGVETTETSLDGGALEYSSTKLLAQKRNVANPRFIKMLLDVVRFYREGRNIPADLEQGCRLDDYLRRQGQAAAIWSASMRDIREFPAAALLRKLAAGVSGPILTGRPVKAIHRGPDG--VRIEDATGETRADHVVIGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 274
40 -10.100[C] KOG3851 Sulfide:quinone oxidoreductase/flavo-binding protein  ali follow..  12  24.PTAFSTRFLSTSRVNRERQECQVLVVGGGTGGCAMAAKLSSRGSDKVVVLEPEDYQPMFTLIGGGMKRLDQS--HRQMADVLPTKAKWVKEIATGLQLNYGKIPGLVPKYVDHVYECLRRTNKGNAIFTFPNCPIKCAGAPQKIAYISERDNVNIIYNTSLPVIFGVKHYAEALMKLIKRRNITLNVQRNLVEVRHKDNIAVFEDLAKPGEETYSMLHVTPPMSTPDVVANCKKLVTPT---VDVDQLTLQHNKYSNVFAIGDSASSPNSKTAAAAAAQSPVVF........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 360
41 -9.700[E] COG1231 Monoamine oxidase  ali follow..  12  49......TRFPGPPNLQGARPGASVIVLGAGLAGLLAAFELRKAGYK-VQILEFQNRPGGRNW---------SLRGGDSYTELGGATQK-----VGYAAGNYFNPGPWRIPHHHRTLLHYCKQFGVAPGGGGVDGAPIPSDDLYSLHDVLDPQQPVGGM----------DMIGKAF---AKQVEGLITYNAKVSKIAQDDKGVVVTYADTVTEAKGDWCVCTIPL-MMAAIKAVPYSGQVKMGLEMNRRFWEEDDDIYGGHSFTDQEIGLISYPNNNLFQDGPAVLLGAFARDLGAFRLAGMTPEQRIEVALAQGSVIHPKSYRKEFRTGASVAWVPWTLGCCARWNEETRKQHYQTLVAMDR-------LAGEHASYVGCWMEGALLS-SLDAITRLHKRALS..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 540
42 -9.480[H] KOG1276 Protoporphyrinogen oxidase  ali follow..  12  47...........IEGGGGTTITTDCVIVGGGISGLCIAQALATKHPDNLIVTEAKDRVGGITREENGFL----WEEGPNSFQPSDPMLTMVVDSGLKDDLVLGDPTAPRFVLWNGKLRPVFDLMSIGGKIRAGFGALGIRPSPPGREESVEIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQNGGSKVKLSWKLSGITKLESGGTYETPDGLVSVQSKSVVMTVPSHASGLLRPLSESAANALSKLYYPPVAAVSISYPKEAIRTECLIDGELKGFGQLHPRTQGVTLGTIYSSSLFPNRAPPGRILLLNYIGGSTNTGILSKSEGELVEAVDRDLRKMLIKPNSTDPLKLGVAIPQFLVGHFDILDTAKSSLTSSGYEGLFLGGNYVAGVALGRCVEGAYETAIEVNN................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 529
43 -9.450[M] COG0562 UDP-galactopyranose mutase  ali follow..  15  2................TESKNYDLIVVGSGLFGLTVAERAASQLGKKVLIVERRSHLGGNA----------------------------YSEAEPETGIEIHKYGAHLFHTSNTRVWEY-TGYQHRVFAMHNGTAYQFPMGLGLINQFFGKYYSPDEA----------RELIKEQSAEIDSSDATNLEEKAISLI---------------GRPLYEAFIRTAKQWQTDPKNLPAGNITRLPVRYNFNNRY.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 190
44 -9.230[C] COG1251 NAD(P)H-nitrite reductase  ali follow..  10  2...................SKVRLAIIGNGMVGHRFIEDLLDKSDADITVFCESSYFSHHTAEELSLVREGFYEKHGVKVLVGERAITINRQSSAGRTVYYDKTGSYRTIEDLNAIEACARRSKRGAVVGGGLLGLEAAGALKNLGVETHVIEFAPMLM----AEQLDQMGGEQLRRKIESMGVRVHTSKNTQEIVQQGNEARKTMRFADGSLEVDFIVFSTGI-ATQCGLAVAQRGGIVIN-----------------------DTCQTSDPDIY--------AIGECAS-----------NNRVYGLVAPGYKMAQVAVDHILGSENAFEGADLSAK--------LKLLGVDVGGIGDAHGRTPGARSYVYLDESKEVYKRLIVSEDN-------KTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDSLILPSHSGKPAIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALKAETKAG-AELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTFEEL-LAKHGKGYGCEVCKPTVGSLLASCWNEYILKPQHTPLQDTNDNFLANIQKDGTYSEITPEGLVAVGRIAREFNLYTKITGSQRIGLFGAQKDDLPEIWRQLIEAGFETGHAYAKMAKTCVGSTWCRYGVGDSVGFGVELENRYMKFGVSGEKGWNLYVCGNGGMKP-DLLAADLDRDTLIKYLDRFMMFYNLEGGIEYLKSVIIDDKLGLNEHLEEEMARLRAAVVCEWTETVNTPSAQVRFKHFINSDKRDPN.......................................................................................... 819
45 -9.070[R] COG3380 Predicted NAD/FAD-dependent oxidoreductase  ali follow..  15  2....................SVPIAIIGTGIAGLSAAHALRSAGQT-VQLFDKGHGSGGRM----------------ASKRSEAGTLDL---------------GAQYFTARDRRFLDALQHWREEGWVDEWKPALYQYRDGQLSPSPDEQPRWVGI---------RMSAITRALLT-----DLQVVFSCRITEVFRGKQHWHLQDSEGQNHGPFNQVLIAI.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 158
46 -9.030[J] KOG2311 NAD/FAD-utilizing protein possibly involved in translation  ali follow..  24........RLSSDSAAPRTPHFDVIVIGGGHAGTEAATAAARCGSRTLLLHRVDTIGQMSCNPSFGGIGKGHLMREVDALDGLCSRICDQSGVHYKVLNRRKGPAVWGLRAQIDR-QNMQKEILNTPLLTVQEGAVEDLILTEPEPEHTGKCRVSGVVLVDGRGMIVIGLETHPAGRLGDQPSIGLAQTLEKLGFVVGRLKTGTPPRIAKESINFSILNKHIPFTNETVWIKPEDQLPCYLTHTNPRVDEIVLKNLETTRGPRYCPSIPNRLHQVWLEPEGDLIYPQGLSMT--------LPAELQEKMITCIRGLEKAKVIQPDGVLLLLPRMECNGAISAHHNLPLPGYGVQYDYLDPRQITPS------ETHLVQRLFFA-----GQINGTTGYEEAAAQGVIAG-----------INASLRVSRKPPFVVSRTEGYIGVLIDDLTTLGTSEPYR-LRPDNADSRLTLRGYKDAGCVSQQRYERACWMKSSLEEGISVLKSIEFLSSKWKKLIPEASISTSRSLPVRALDVLKYEEVDMDSLAKAVPEPLKELAERLKIEATYESVLFHQLQEIKGVQ----QDEALQLPKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAASRIPGVTPAAIINLLRFVKTTQRRQSAMNESSKTDQYLCDADRLQEREL...................................................................................................................................................................................................... 717

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Godzik A. Fold recognition methods. Methods Biochem Anal. 2003;44:525-46. Review.