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Query: gi|16082703|ref|NP_395149.1| plasmid-partitioning protein SopA (YPCD1.13c) [Yersinia pestis CO92], from Y.pestis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MDLKSTLDRCIERGQFMTQEIAKSQFGNDSPAARTITRRWRITEAAELVGVTPQTIRNYEDSGKLPPPDTAMIGRVEQRTGYSIQQINDMRDVFKTRLSKPKGENPVVLAIAAHKGGAYKTSTSVHIAQWMALQGLRVLLIDATDPQATASLYHGYVPDLHIHEEDTLLPYYLGQRDDAAYAIKPTCWPNLEVIPSCLAVHRIESEIYGLHDQGKLPVAPHLLLRAAIESVWDSYDVVVLDSAPNLGIGTINVVCAADVIVVPTPAELYDYVSTLQFFTMLRDLMSNIDLNGFEPDVRVLITKFSNAIGSQSQWMDDQIRNAWGGMVLKEVVRVTDEVGKGQVRMRTVFEQAANQRSTPAAWRNAVSIWEPVCAEIFNRLVKPRWENALast
1 -6.000sp|Q96MS3|GL1D1_HUMAN Glycosyltransferase 1 domain-containing protein 1 OS=Homo sapiens GN=GLT1D1 PE=2 SV=2 (Range: 1-57)  ali follow..  17  1.........................................................................................................MRLLFLAVLRPHTGNAVTAQRVRAHLEAAGHVCVLKDAFDFESRSEI............................................................................................................................................................................................................................................ 47
2 -5.560tr|C9JZ58|C9JZ58_HUMAN Uncharacterized protein OS=Homo sapiens GN=ZNF568 PE=4 SV=1 (Range: 103-171)  ali follow..  23  39.................................................................................................................................................................................................................................................CCPGWSAMARSQLTATSAILLPQPPE......................................................................................................................... 69
3 -4.850sp|Q6ZV29|PLPL7_HUMAN Patatin-like phospholipase domain-containing protein 7 OS=Homo sapiens GN=PNPLA7 PE=2 SV=3 (Range: 729-925)  ali follow..  16  2..........................................................................................................STVAVMPVSEEVPLTAFALELEHALSAIGPTLLL-----TSDNIKRRLG---------------------------------------------------------SAALDSVHEYRLSSWLGQQEDTHRIVLYQVDGTLTPWTQRCVRQADCILIVGLGD......................................................................................................................... 100
4 -4.740sp|Q8IY17|PLPL6_HUMAN Neuropathy target esterase OS=Homo sapiens GN=PNPLA6 PE=1 SV=2 (Range: 774-969)  ali follow..  15  2...........................................................................................................TVAILPVCAEVPMVAFTLELQHALQAIGPTLLL--------------------------------------------------------------NSDIIRARLGASALDSIQEFRLSGWLAQQEDAHRIVLYQTDASLTPWTVRCLRQADCILIVGLGD......................................................................................................................... 99
5 -4.640tr|F8WBH0|F8WBH0_HUMAN Uncharacterized protein OS=Homo sapiens GN=ATL2 PE=4 SV=1 (Range: 33-93)  ali follow..  20  13.................................................................................................................................................................................................................................................CRPGWGAVARSRLTASHAILRPQPPEYLGLQAPATVSGLL........................................................................................................... 57
6 -4.590tr|E5RGM2|E5RGM2_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1 (Range: 1-64)  ali follow..  19  34.................................................................................................................................................................................................................................................CRPGWSALAQSRLTASSAVLLPQPPE......................................................................................................................... 64
7 -4.490sp|Q8IYL2|TRM44_HUMAN Probable tRNA (uracil-O(2)-)-methyltransferase OS=Homo sapiens GN=METTL19 PE=2 SV=2 (Range: 406-501)  ali follow..  10  5....................................................................................................................................................................................................................................KTLFPDVDWLI-ELTPWIPVIAARSSYNCRFFVLPCCFFDFIKTQYREYLDFIKEVGFTCGFHVDEDCLRIPSTK..................................................................................... 92
8 -4.420sp|Q9NU22|MDN1_HUMAN Midasin OS=Homo sapiens GN=MDN1 PE=1 SV=2 (Range: 4345-4482)  ali follow..  11  3.............................................................................................................................................................................................................................................VVLDLIPSPSPIPGSQLPSGCRMRKQDHLWQQSTTRLTEMLKTIKTVKADVDKIRQQSCETLFHSWKD--------------------EVCSSALSCLSQVSVHLQGLESLFILPGMEVEQRDSQMALVESLEYVRGEISKAMADTTWKT. 138
9 -4.390tr|D6RBA6|D6RBA6_HUMAN Uncharacterized protein OS=Homo sapiens GN=SCLT1 PE=4 SV=1 (Range: 48-131)  ali follow..  19  13.......................................................................................................................................................................................................VTEYDKHLGELNGQLKYYQKQVGEMKLQLENVIKENERVLL-CLPGWSAVVRSRLTASSAILLPQPPQ......................................................................................................................... 84
10 -4.340tr|E9PLJ0|E9PLJ0_HUMAN Uncharacterized protein OS=Homo sapiens GN=IPO7 PE=4 SV=1 (Range: 1-64)  ali follow..  17  31..............................................................................................................................................................................................................................................FRSCCPDWSAMAQSRLATTSAILLPQPLE......................................................................................................................... 64

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 8 8 6   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.