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Query: gi|16082705|ref|NP_395151.1| hypothetical protein (YPCD1.15c) [Yersinia pestis CO92], from Y.pestis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVELCRLLKITRSVYSASLNFRVDVKRLQLRELHQQSRGAAGSRTLSLLMRQSGYNVVRWLARRLMRECGLASRQPGKPRYRGEREVSLASPDLLKRQFKPSEPNRVWSGYISYIKVNGGWCYLALVIDLYSRRIVGSAISSSPDAELVCRALast
1 -6.660sp|Q8IZY2|ABCA7_HUMAN ATP-binding cassette sub-family A member 7 OS=Homo sapiens GN=ABCA7 PE=1 SV=3 (Range: 239-549)  ali follow..  15  162LGRVTECLSLDKLEAAP----SEAALVSRALQLLAEHRFWAGV--VFLGPEDSSDPTEHPTPDLGPGHVRIKIRMDIDVVTRT---------NKIRDRFWDPGPAADPLTDLRYVW--GGFVYLQDLVE---RAAVRVLSGANPRAGLYLQQ 293
2 -5.880sp|O95477|ABCA1_HUMAN ATP-binding cassette sub-family A member 1 OS=Homo sapiens GN=ABCA1 PE=1 SV=3 (Range: 358-638)  ali follow..  16  210............................................................................................NKIKDGYWDPGPRADPFEDMRYVW--GGFAYLQDVVE---QAIIRVLTGTEKKTGVYMQQ 264
3 -5.490sp|O75751|S22A3_HUMAN Solute carrier family 22 member 3 OS=Homo sapiens GN=SLC22A3 PE=1 SV=1 (Range: 90-148)  ali follow..  31  31.............................................................................................................RSAPLVPCRGGWRY-----AQAHSTIV-------SEFDLVC.. 59
4 -5.320sp|Q8IZY2|ABCA7_HUMAN ATP-binding cassette sub-family A member 7 OS=Homo sapiens GN=ABCA7 PE=1 SV=3 (Range: 1261-1427)  ali follow..  13  9.......LRLSPTMYFFSEDAPGDPGRARLLEALLQEAG-LEEPPVQHSSHRFSAPEVPAEVAKVLASGNWTPESPSPACQCSRPGARRLLPDCPAAAGGPPPPQAV-VQNLTGRNLSD---FLVKTYPRLVRQ--GFSLGGRDPG...... 165
5 -5.270sp|O60303|K0556_HUMAN Uncharacterized protein KIAA0556 OS=Homo sapiens GN=KIAA0556 PE=1 SV=4 (Range: 1237-1365)  ali follow..  11  7.................................................................IHLHQISASPRDLNELPEYSDDSRALDKLIDGTNITMEDEHMWLIPFS--PGLDHVVTIRLDRAESIAGLRFWNYNKSPE....... 84
6 -5.210sp|Q92616|GCN1L_HUMAN Translational activator GCN1 OS=Homo sapiens GN=GCN1L1 PE=1 SV=6 (Range: 707-781)  ali follow..  10  38............................................................................................STITASVQNPALRLVTREEFAIMQTPAGELYDKSIIQ....................... 74
7 -5.150sp|Q96Q15|SMG1_HUMAN Serine/threonine-protein kinase SMG1 OS=Homo sapiens GN=SMG1 PE=1 SV=3 (Range: 304-372)  ali follow..  22  11..........................................................................................................................NFRDTVDI----LVGWHIDHTQKPSL.... 32
8 -5.070sp|Q9H649|NSUN3_HUMAN Putative methyltransferase NSUN3 OS=Homo sapiens GN=NSUN3 PE=2 SV=1 (Range: 1-91)  ali follow..  1......................................................................MLTQLKAKSEGKLAKQICKVVLDHFEKQYSKE--GDAWNTVREILTSPSCWQYAVLLNRFNYPFELEKDLHLKGYHTLSQGS 81
9 -5.030sp|Q68CL5|TPGS2_HUMAN Tubulin polyglutamylase complex subunit 2 OS=Homo sapiens GN=C18orf10 PE=2 SV=2 (Range: 137-250)  ali follow..  16  24..................................................................................................YKSGKPALAEDTEIWFLDRALYWHFLTDTFTAYYRLLIQWQYA........... 72
10 -4.890sp|Q8N9S7|CX059_HUMAN Uncharacterized protein CXorf59 OS=Homo sapiens GN=CXorf59 PE=2 SV=1 (Range: 95-322)  ali follow..  13  76YDVLLHLSGKMPPGINSSQSLPVDNHEKRVIQLHLQHS------SLLDFLNAQGGCISHVLPEFLLEPEDYKRWIEIMSSTNTMPVSSCTPKVIEMSKFEAWS-KRAW---------------TDVFLQIYKVLVLSRVVPYCSNN...... 204

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Database searching by flexible protein structure alignment. Protein Sci. 2004 Jul;13(7):1841-50.