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Query: gi|16082711|ref|NP_395157.1| hypothetical protein (YPCD1.22c) [Yersinia pestis CO92], from Y.pestis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
# Score Template Links and tools%idFirst MQHPVSFPSFSFHDNSIFCNKPIVGTMNINADHEKNLKVSIIYKIQLIGGITEILNGGVINWGIFNLVGYFKSSISLIKIIIIDNTNLVMLYVKIWINNENFLIYSELKTNELLYKPYLLNLIDIIVTMLast
1 -8.100sp|Q9ULL1|PKHG1_HUMAN Pleckstrin homology domain-containing family G member 1 OS=Homo sapiens GN=PLEKHG1 PE=1 SV=2 (Range: 834-944)  ali follow..  25  4.............................................................................................EIWNDLENYIKKNEDKARDRLLAAFPVSKDDV.... 35
2 -6.370tr|B5MD07|B5MD07_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1 (Range: 40-90)  ali follow..  23  8.................................................................................ILYKENSVIKELDKYLQHHAFL---NARRKEMLYKRWVDCVADPL... 49
3 -6.370tr|C9JGZ2|C9JGZ2_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1 (Range: 40-90)  ali follow..  23  8.................................................................................ILYKENSVIKELDKYLQHHAFL---NARRKEMLYKRWVDCVADPL... 49
4 -6.370sp|P0C875|U638B_HUMAN UPF0638 protein B OS=Homo sapiens PE=2 SV=1 (Range: 40-90)  ali follow..  23  8.................................................................................ILYKENSVIKELDKYLQHHAFL---NARRKEMLYKRWVDCVADPL... 49
5 -6.330sp|Q70CQ2|UBP34_HUMAN Ubiquitin carboxyl-terminal hydrolase 34 OS=Homo sapiens GN=USP34 PE=1 SV=2 (Range: 1-82)  ali follow..  17  29...................................................................................EHTLKIFTYINSWTQRQCLCCFKEYKHLEI-FNQVVCALINLVIAQ 73
6 -6.310tr|F2Z3J0|F2Z3J0_HUMAN Uncharacterized protein OS=Homo sapiens GN=C2orf84 PE=4 SV=1 (Range: 38-106)  ali follow..  14  8.................................................................................ILFKENSIVKRLDMYFQHVDTF---KERRKEMLHKKWVENVAEPL... 49
7 -6.280tr|E7ES18|E7ES18_HUMAN Uncharacterized protein OS=Homo sapiens GN=PKD1 PE=4 SV=1 (Range: 484-560)  ali follow..  36  40........................................................................................VMVFPGLRLSREAFLTTAEFGTQEL................ 64
8 -6.120tr|B3KRS0|B3KRS0_HUMAN Uncharacterized protein OS=Homo sapiens GN=AMZ1 PE=2 SV=1 (Range: 1-90)  ali follow..  17  16...........................................................................ALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLIR........ 61
9 -6.120sp|Q400G9|AMZ1_HUMAN Archaemetzincin-1 OS=Homo sapiens GN=AMZ1 PE=1 SV=1 (Range: 1-90)  ali follow..  17  16...........................................................................ALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLIR........ 61
10 -5.980sp|Q5TEA3|CT194_HUMAN Uncharacterized protein C20orf194 OS=Homo sapiens GN=C20orf194 PE=2 SV=1 (Range: 534-647)  ali follow..  11  53...............................................................MNSISFYDGDSTSTVAALLIDFKSSLLPHLPVHFHGSSNFLMIALFPKSKIYQAFYSEVFSL.... 114

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 9 1 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Database searching by flexible protein structure alignment. Protein Sci. 2004 Jul;13(7):1841-50.