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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 5436< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|30260216|ref|NP_842593.1| hypothetical protein (BA_0022) [Bacillus anthracis str. Ames] 73 NEW_HUMAN_DOMAINS 11-58 -6.180 10  sp|Q9NQG7|HPS4_HUMAN Hermansky-Pudlak syndrome 4 protein OS=Homo sapiens GN=HPS4 PE=1 SV=2
22 gi|30260217|ref|NP_842594.1| sigma-k factor processing regulatory protein BofA (BA_0024) [Bacillus anthracis str. Ames] 89 NEW_HUMAN_DOMAINS 47-80 -6.360 26  sp|Q6NXP2|F71F2_HUMAN Protein FAM71F2 OS=Homo sapiens GN=FAM71F2 PE=2 SV=3
23 gi|30260218|ref|NP_842595.1| csfB protein, putative (BA_0025) [Bacillus anthracis str. Ames] 59 NEW_HUMAN_DOMAINS 1-54 -6.780 13  sp|Q2NL67|PARP6_HUMAN Poly [ADP-ribose] polymerase 6 OS=Homo sapiens GN=PARP6 PE=2 SV=1
24 gi|30260219|ref|NP_842596.1| lysine decarboxylase (BA_0026) [Bacillus anthracis str. Ames] 473 NEW_HUMAN_DOMAINS 169-261 -4.750 sp|Q2NKJ3|CTC1_HUMAN CST complex subunit CTC1 OS=Homo sapiens GN=CTC1 PE=1 SV=2
25 gi|30260220|ref|NP_842597.1| thymidylate kinase (BA_0027) [Bacillus anthracis str. Ames] 208 NEW_HUMAN_DOMAINS 5-88 -6.420 15  sp|Q8IVG5|SAM9L_HUMAN Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens GN=SAMD9L PE=1 SV=2
26 gi|30260221|ref|NP_842598.1| DNA polymerase III subunit delta' (BA_0028) [Bacillus anthracis str. Ames] 327 NEW_HUMAN_DOMAINS 46-120 -5.920 17  sp|Q9P2D8|UNC79_HUMAN Protein unc-79 homolog OS=Homo sapiens GN=UNC79 PE=2 SV=3
27 gi|30260222|ref|NP_842599.1| hypothetical protein (BA_0029) [Bacillus anthracis str. Ames] 278 NEW_HUMAN_DOMAINS 161-211 -5.640 15  tr|F8W0C3|F8W0C3_HUMAN Uncharacterized protein OS=Homo sapiens GN=OTOGL PE=4 SV=1
28 gi|30260223|ref|NP_842600.1| DNA replication intiation control protein YabA (BA_0030) [Bacillus anthracis str. Ames] 116 NEW_HUMAN_DOMAINS 1-56 -7.070 19  sp|Q14687|GSE1_HUMAN Genetic suppressor element 1 OS=Homo sapiens GN=GSE1 PE=1 SV=3
29 gi|30260224|ref|NP_842601.1| hypothetical protein (BA_0031) [Bacillus anthracis str. Ames] 246 NEW_HUMAN_DOMAINS 46-124 -5.610 12  sp|Q5VW00|DC122_HUMAN DDB1- and CUL4-associated factor 12-like protein 2 OS=Homo sapiens GN=DCAF12L2 PE=2 SV=1
30 gi|30260225|ref|NP_842602.1| GIY-YIG nuclease superfamily protein (BA_0032) [Bacillus anthracis str. Ames] 96 NEW_HUMAN_DOMAINS 8-66 -6.580 18  sp|Q13515|BFSP2_HUMAN Phakinin OS=Homo sapiens GN=BFSP2 PE=1 SV=1
31 gi|30260226|ref|NP_842603.1| hypothetical protein (BA_0033) [Bacillus anthracis str. Ames] 291 NEW_HUMAN_DOMAINS 22-94 -5.860 15  sp|P78527|PRKDC_HUMAN DNA-dependent protein kinase catalytic subunit OS=Homo sapiens GN=PRKDC PE=1 SV=3
32 gi|30260227|ref|NP_842604.1| transition state transcriptional regulatory protein AbrB (BA_0034) [Bacillus anthracis str. Ames] 94 NEW_HUMAN_DOMAINS 1-43 -8.260 20  tr|E9PHQ1|E9PHQ1_HUMAN Uncharacterized protein OS=Homo sapiens GN=MIB2 PE=4 SV=1
33 gi|30260228|ref|NP_842605.1| methionyl-tRNA synthetase (BA_0036) [Bacillus anthracis str. Ames] 660 NEW_HUMAN_DOMAINS 2-63 -7.130 12  sp|Q5D0E6|DALD3_HUMAN DALR anticodon-binding domain-containing protein 3 OS=Homo sapiens GN=DALRD3 PE=2 SV=2
34 gi|30260229|ref|NP_842606.1| TatD family deoxyribonuclease (BA_0037) [Bacillus anthracis str. Ames] 255 NEW_HUMAN_DOMAINS 170-252 -6.040 sp|P14543|NID1_HUMAN Nidogen-1 OS=Homo sapiens GN=NID1 PE=1 SV=3
35 gi|30260230|ref|NP_842607.1| primase-related protein (BA_0038) [Bacillus anthracis str. Ames] 185 NEW_HUMAN_DOMAINS 1-59 -7.180 11  sp|Q12772|SRBP2_HUMAN Sterol regulatory element-binding protein 2 OS=Homo sapiens GN=SREBF2 PE=1 SV=2
36 gi|30260231|ref|NP_842608.1| dimethyladenosine transferase (BA_0039) [Bacillus anthracis str. Ames] 292 NEW_HUMAN_DOMAINS 28-158 -6.450 12  tr|E9PL53|E9PL53_HUMAN Uncharacterized protein OS=Homo sapiens GN=SAAL1 PE=4 SV=1
37 gi|30260232|ref|NP_842609.1| yabG protein (BA_0040) [Bacillus anthracis str. Ames] 287 NEW_HUMAN_DOMAINS 105-225 -6.940 sp|Q9NX45|SOLH2_HUMAN Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2 OS=Homo sapiens GN=SOHLH2 PE=2 SV=2
38 gi|30260233|ref|NP_842610.1| veg protein (BA_0041) [Bacillus anthracis str. Ames] 86 NEW_HUMAN_DOMAINS 1-43 -4.920 11  sp|P57076|CU059_HUMAN Uncharacterized protein C21orf59 OS=Homo sapiens GN=C21orf59 PE=1 SV=1
39 gi|30260234|ref|NP_842611.1| small, acid-soluble spore protein (BA_0042) [Bacillus anthracis str. Ames] 59 NEW_HUMAN_DOMAINS 2-23 -4.900 22  sp|Q9Y679|AUP1_HUMAN Ancient ubiquitous protein 1 OS=Homo sapiens GN=AUP1 PE=1 SV=1
40 gi|30260235|ref|NP_842612.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (BA_0043) [Bacillus anthracis str. Ames] 289 NEW_HUMAN_DOMAINS 89-137 -5.370 14  sp|Q8IXQ8|PDZD9_HUMAN PDZ domain-containing protein 9 OS=Homo sapiens GN=PDZD9 PE=2 SV=2


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.