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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:
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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 1693next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|11497090|ref|NP_051162.1| hypothetical protein (BB_P01) [Borrelia burgdorferi B31] 407 PfamA32U 16-381 -24.200 15  PF06381.11; Q11J16_CHESB/39-389; Protein of unknown function (DUF1073 topsan)
2 gi|11497091|ref|NP_051163.1| hypothetical protein (BB_P02) [Borrelia burgdorferi B31] 230 PfamA32U 1-223 -111.000 96  PF07094.11; Q9RZX9_BORBU/1-223; Protein of unknown function (DUF1357 topsan)
3 gi|11497092|ref|NP_051164.1| hypothetical protein (BB_P03) [Borrelia burgdorferi B31] 185 PfamA32U 1-184 -97.500 51  PF02989.14; Q9S0D2_BORBU/1-190; Lyme disease proteins of unknown function
4 gi|11497093|ref|NP_051165.1| hypothetical protein (BB_P04) [Borrelia burgdorferi B31] 254 PfamA32U 46-247 -83.300 38  PF02989.14; Q9S0D2_BORBU/1-190; Lyme disease proteins of unknown function
5 gi|11497094|ref|NP_051166.1| hypothetical protein (BB_P05) [Borrelia burgdorferi B31] 190 PfamA32U 1-189 -107.000 88  PF02989.14; Q9S0D2_BORBU/1-190; Lyme disease proteins of unknown function
6 gi|11497064|ref|NP_051167.1| hypothetical protein (BB_P06) [Borrelia burgdorferi B31] 324 PfamA32U 73-320 -8.990 13  PF09950.9; H8L668_FRAAD/90-334; Uncharacterized protein conserved in bacteria (DUF2184 topsan)
7 gi|11497065|ref|NP_051168.1| hypothetical protein (BB_P07) [Borrelia burgdorferi B31] 153 PfamA32U 7-78 -36.600 27  PF13029.6; O50935_BORBU/1-84; Domain of unknown function (DUF3890 topsan)
8 gi|11497066|ref|NP_051169.1| hypothetical protein (BB_P08) [Borrelia burgdorferi B31] 133 PfamA32U 7-133 -84.700 92  PF07405.11; Q9R2M2_BORBU/1-127; Protein of unknown function (DUF1506 topsan)
9 gi|11497067|ref|NP_051170.1| hypothetical protein (BB_P09) [Borrelia burgdorferi B31] 129 PfamA32U 60-129 -12.000 10  PF05069.13; A1VSG9_POLNA/4-154; Phage virion morphogenesis family
10 gi|11497068|ref|NP_051171.1| hypothetical protein (BB_P10) [Borrelia burgdorferi B31] 188 PfamA32U 1-179 -110.000 92  PF05561.11; Q9S0C9_BORBU/1-180; Borrelia burgdorferi protein of unknown function (DUF764 topsan)
11 gi|11497095|ref|NP_051172.1| hypothetical protein (BB_P11) [Borrelia burgdorferi B31] 370 PfamA32U 1-362 -138.000 95  PF05619.11; Q9S003_BORBU/1-362; Borrelia burgdorferi protein of unknown function (DUF787 topsan)
12 gi|11497096|ref|NP_051173.1| hypothetical protein (BB_P12) [Borrelia burgdorferi B31] 142 PfamA32U 3-139 -112.000 98  PF07316.11; Q9S050_BORBU/3-139; Protein of unknown function (DUF1463 topsan)
13 gi|11497097|ref|NP_051174.1| hypothetical protein (BB_P13) [Borrelia burgdorferi B31] 151 PfamA32U 3-147 -102.000 44  PF07341.11; Q6ASH9_BORBP/1-163; Protein of unknown function (DUF1473 topsan)
14 gi|11497098|ref|NP_051175.1| hypothetical protein (BB_P14) [Borrelia burgdorferi B31] 78 PfamA32U 16-76 -46.800 47  PF07032.11; W6THF9_9SPIR/2-69; Protein of unknown function (DUF1322 topsan)
15 gi|11497099|ref|NP_051176.1| hypothetical protein (BB_P15) [Borrelia burgdorferi B31] 424 PfamA32U 1-422 -102.000 94  PF05537.11; Q9S0I6_BORBU/1-422; Borrelia burgdorferi protein of unknown function (DUF759 topsan)
16 gi|11497100|ref|NP_051177.1| hypothetical protein (BB_P16) [Borrelia burgdorferi B31] 227 PfamA32U 45-227 -118.000 41  PF05632.11; O50944_BORBU/3-187; Borrelia burgdorferi protein of unknown function (DUF792 topsan)
17 gi|11497101|ref|NP_051178.1| hypothetical protein (BB_P17) [Borrelia burgdorferi B31] 316 PfamA32U 1-311 -153.000 99  PF05113.13; Q9S0F4_BORBU/1-311; Protein of unknown function (DUF693 topsan)
18 gi|11497102|ref|NP_051179.1| hypothetical protein (BB_P18) [Borrelia burgdorferi B31] 181 PfamA32U 1-135 -86.400 46  PF05606.11; W6TJ35_9SPIR/1-135; Borrelia burgdorferi protein of unknown function (DUF777 topsan)
19 gi|11497069|ref|NP_051180.1| hypothetical protein (BB_P19) [Borrelia burgdorferi B31] 110 PfamA32U 1-97 -13.400 10  PF10934.8; A5I4A4_CLOBH/29-134; Protein of unknown function (DUF2634 topsan)
20 gi|11497070|ref|NP_051181.1| hypothetical protein (BB_P20) [Borrelia burgdorferi B31] 291 PfamA32U 1-290 -105.000 100  PF03434.13; Q9R331_BORBU/1-290; DUF276 topsan

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.