FFAS03 list of results B.fragilis / HGM

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 4678 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|60680547|ref|YP_210691.1| hypothetical protein (BF1003) [Bacteroides fragilis NCTC 9343] 117 HGM_OVER 49-112 -14.400 17 PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;
2 gi|60680256|ref|YP_210400.1| hypothetical protein (BF0697) [Bacteroides fragilis NCTC 9343] 74 HGM_OVER 47-72 -4.690 30 PB071107 _Gut.Meta.Jp.0066071_ gi|162701604|dbj|BAAY01026246.1||2 (+ 344:749~0 complete)
3 gi|60681449|ref|YP_211593.1| MatE family transmembrane protein (BF1960) [Bacteroides fragilis NCTC 9343] 447 HGM_OVER 22-101 -2.520 14 PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]
4 gi|60683425|ref|YP_213569.1| 30S ribosomal protein S14 (BF3990) [Bacteroides fragilis NCTC 9343] 99 HGM_OVER 1-99 -4.430 7 PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770;
5 gi|60682385|ref|YP_212529.1| putative CTP pyrophosphohydrolase (BF2916) [Bacteroides fragilis NCTC 9343] 130 HGM_OVER 2-86 -6.020 12 HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167;
6 gi|60680762|ref|YP_210906.1| putative transmembrane conjugate transposon protein (BF1242) [Bacteroides fragilis NCTC 9343] 110 HGM_OVER 2-106 -77.700 60 PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;
7 gi|60683330|ref|YP_213474.1| ATP-dependent protease ATP-binding subunit ClpX (BF3893) [Bacteroides fragilis NCTC 9343] 415 HGM_OVER 68-377 -5.350 10 PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]
8 gi|60682477|ref|YP_212621.1|(removed signalp:1-23) hypothetical protein (BF3007) [Bacteroides fragilis NCTC 9343] 565 HGM_OVER 375-565 -5.710 9 PB062763 Q9F6U5_BACTN/1-245 PB062763; Pfam-B_62763;
9 gi|60681243|ref|YP_211387.1| hypothetical protein (BF1751) [Bacteroides fragilis NCTC 9343] 157 HGM_OVER 1-121 -5.000 7 PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]
10 gi|60682315|ref|YP_212459.1| hypothetical protein (BF2845) [Bacteroides fragilis NCTC 9343] 207 HGM_OVER 132-196 -3.480 12 PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;
11 gi|60680924|ref|YP_211068.1| putative anti-sigma factor (BF1413) [Bacteroides fragilis NCTC 9343] 311 HGM_OVER 109-205 -4.680 14 PB144506 _Gut.Meta.Jp.0101058_ gi|162866171|dbj|BABB01003836.1||1 (- 121:946~0 complete)
12 gi|60683563|ref|YP_213707.1| putative SufE Fe/S-cluster-related protein (BF4142) [Bacteroides fragilis NCTC 9343] 142 HGM_OVER 42-141 -4.380 14 PB044822 Q89ZL7_BACTN/1-147 PB044822; Pfam-B_44822;
13 gi|60682225|ref|YP_212369.1| putative two component system response regulator (BF2753) [Bacteroides fragilis NCTC 9343] 225 HGM_OVER 7-207 -2.870 8 PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;
14 gi|60682801|ref|YP_212945.1| nicotinate phosphoribosyltransferase (BF3334) [Bacteroides fragilis NCTC 9343] 388 HGM_OVER 267-367 -3.090 16 HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;
15 gi|60680875|ref|YP_211019.1| hypothetical protein (BF1359) [Bacteroides fragilis NCTC 9343] 245 HGM_OVER 10-143 -9.770 10 PB023339 Q8A4U7_BACTN/1-171 PB023339; Pfam-B_23339;
16 gi|60682029|ref|YP_212173.1| putative bifunctional CbiF/CbiG cobalamin biosynthesis protein (BF2549) [Bacteroides fragilis NCTC 9343] 599 HGM_OVER 1-172 -2.690 10 PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]
17 gi|60681247|ref|YP_211391.1| hypothetical protein (BF1755) [Bacteroides fragilis NCTC 9343] 299 HGM_OVER 54-280 -2.930 7 PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]
18 gi|60681605|ref|YP_211749.1| hypothetical protein (BF2124) [Bacteroides fragilis NCTC 9343] 361 HGM_OVER 314-359 -4.790 15 PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;
19 gi|60681337|ref|YP_211481.1| hypothetical protein (BF1846) [Bacteroides fragilis NCTC 9343] 71 HGM_OVER 2-36 -4.360 17 HGC00857 gi|162620543|dbj|BAAW01002606.1|2.0 TMP01139;
20 gi|60680681|ref|YP_210825.1| hypothetical protein (BF1156) [Bacteroides fragilis NCTC 9343] 221 HGM_OVER 57-221 -1.880 7 PB060121 Q64SA7_BACFR/1-251 PB060121; Pfam-B_60121;

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|60680547\|ref\|YP_210691.1\| hypothetical protein (BF1003) [Bacteroides fragilis NCTC 9343]`	`117`	`HGM_OVER`	`49-112`	`-14.400`	`17`	`PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;`
2	`gi\|60680256\|ref\|YP_210400.1\| hypothetical protein (BF0697) [Bacteroides fragilis NCTC 9343]`	`74`	`HGM_OVER`	`47-72`	`-4.690`	`30`	`PB071107 _Gut.Meta.Jp.0066071_ gi\|162701604\|dbj\|BAAY01026246.1\|\|2 (+ 344:749~0 complete)`
3	`gi\|60681449\|ref\|YP_211593.1\| MatE family transmembrane protein (BF1960) [Bacteroides fragilis NCTC 9343]`	`447`	`HGM_OVER`	`22-101`	`-2.520`	`14`	`PB033130 gi\|160880323\|ref\|YP_001559291.1\| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi\|160428989\|gb\|ABX42552.1\| transglutaminase domain protein [Clostridium phytofermentans ISDg]`
4	`gi\|60683425\|ref\|YP_213569.1\| 30S ribosomal protein S14 (BF3990) [Bacteroides fragilis NCTC 9343]`	`99`	`HGM_OVER`	`1-99`	`-4.430`	`7`	`PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770;`
5	`gi\|60682385\|ref\|YP_212529.1\| putative CTP pyrophosphohydrolase (BF2916) [Bacteroides fragilis NCTC 9343]`	`130`	`HGM_OVER`	`2-86`	`-6.020`	`12`	`HGC00878 gi\|162869432\|dbj\|BABB01000575.1\|7.0 TMP01167;`
6	`gi\|60680762\|ref\|YP_210906.1\| putative transmembrane conjugate transposon protein (BF1242) [Bacteroides fragilis NCTC 9343]`	`110`	`HGM_OVER`	`2-106`	`-77.700`	`60`	`PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;`
7	`gi\|60683330\|ref\|YP_213474.1\| ATP-dependent protease ATP-binding subunit ClpX (BF3893) [Bacteroides fragilis NCTC 9343]`	`415`	`HGM_OVER`	`68-377`	`-5.350`	`10`	`PB005684 gi\|160884252\|ref\|ZP_02065255.1\| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi\|156109991\|gb\|EDO11736.1\| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]`
8	`gi\|60682477\|ref\|YP_212621.1\|(removed signalp:1-23) hypothetical protein (BF3007) [Bacteroides fragilis NCTC 9343]`	`565`	`HGM_OVER`	`375-565`	`-5.710`	`9`	`PB062763 Q9F6U5_BACTN/1-245 PB062763; Pfam-B_62763;`
9	`gi\|60681243\|ref\|YP_211387.1\| hypothetical protein (BF1751) [Bacteroides fragilis NCTC 9343]`	`157`	`HGM_OVER`	`1-121`	`-5.000`	`7`	`PB047496 gi\|150008556\|ref\|YP_001303299.1\| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi\|149936980\|gb\|ABR43677.1\| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]`
10	`gi\|60682315\|ref\|YP_212459.1\| hypothetical protein (BF2845) [Bacteroides fragilis NCTC 9343]`	`207`	`HGM_OVER`	`132-196`	`-3.480`	`12`	`PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;`
11	`gi\|60680924\|ref\|YP_211068.1\| putative anti-sigma factor (BF1413) [Bacteroides fragilis NCTC 9343]`	`311`	`HGM_OVER`	`109-205`	`-4.680`	`14`	`PB144506 _Gut.Meta.Jp.0101058_ gi\|162866171\|dbj\|BABB01003836.1\|\|1 (- 121:946~0 complete)`
12	`gi\|60683563\|ref\|YP_213707.1\| putative SufE Fe/S-cluster-related protein (BF4142) [Bacteroides fragilis NCTC 9343]`	`142`	`HGM_OVER`	`42-141`	`-4.380`	`14`	`PB044822 Q89ZL7_BACTN/1-147 PB044822; Pfam-B_44822;`
13	`gi\|60682225\|ref\|YP_212369.1\| putative two component system response regulator (BF2753) [Bacteroides fragilis NCTC 9343]`	`225`	`HGM_OVER`	`7-207`	`-2.870`	`8`	`PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;`
14	`gi\|60682801\|ref\|YP_212945.1\| nicotinate phosphoribosyltransferase (BF3334) [Bacteroides fragilis NCTC 9343]`	`388`	`HGM_OVER`	`267-367`	`-3.090`	`16`	`HGC00509 gi\|162658693\|dbj\|BAAX01000912.1\|3.0 TMP00561;`
15	`gi\|60680875\|ref\|YP_211019.1\| hypothetical protein (BF1359) [Bacteroides fragilis NCTC 9343]`	`245`	`HGM_OVER`	`10-143`	`-9.770`	`10`	`PB023339 Q8A4U7_BACTN/1-171 PB023339; Pfam-B_23339;`
16	`gi\|60682029\|ref\|YP_212173.1\| putative bifunctional CbiF/CbiG cobalamin biosynthesis protein (BF2549) [Bacteroides fragilis NCTC 9343]`	`599`	`HGM_OVER`	`1-172`	`-2.690`	`10`	`PB083081 gi\|160890648\|ref\|ZP_02071651.1\| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi\|156859647\|gb\|EDO53078.1\| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]`
17	`gi\|60681247\|ref\|YP_211391.1\| hypothetical protein (BF1755) [Bacteroides fragilis NCTC 9343]`	`299`	`HGM_OVER`	`54-280`	`-2.930`	`7`	`PB048631 gi\|160885545\|ref\|ZP_02066548.1\| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi\|156109167\|gb\|EDO10912.1\| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]`
18	`gi\|60681605\|ref\|YP_211749.1\| hypothetical protein (BF2124) [Bacteroides fragilis NCTC 9343]`	`361`	`HGM_OVER`	`314-359`	`-4.790`	`15`	`PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;`
19	`gi\|60681337\|ref\|YP_211481.1\| hypothetical protein (BF1846) [Bacteroides fragilis NCTC 9343]`	`71`	`HGM_OVER`	`2-36`	`-4.360`	`17`	`HGC00857 gi\|162620543\|dbj\|BAAW01002606.1\|2.0 TMP01139;`
20	`gi\|60680681\|ref\|YP_210825.1\| hypothetical protein (BF1156) [Bacteroides fragilis NCTC 9343]`	`221`	`HGM_OVER`	`57-221`	`-1.880`	`7`	`PB060121 Q64SA7_BACFR/1-251 PB060121; Pfam-B_60121;`