FFAS03 list of results B.thetaiotaomicron / CSGID

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 4778 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|29345411|ref|NP_808914.1| hypothetical protein BT_0001 [Bacteroides thetaiotaomicron VPI-5482] 205 CSGID 1-68 -7.050 17 IDP05443 hypothetical protein lmo0463 [Listeria monocytogenes EGD-e] lmo0463 [Listeria monocytogenes EGD-e]
2 gi|29345412|ref|NP_808915.1|(removed signal:1-19) hypothetical protein BT_0002 [Bacteroides thetaiotaomicron VPI-5482] 312 CSGID 1-125 -5.760 8 IDP05554 hypothetical protein CD3669 [Clostridium difficile 630] CD3669 [Peptoclostridium difficile 630]
3 gi|29345413|ref|NP_808916.1| hypothetical protein BT_0003 [Bacteroides thetaiotaomicron VPI-5482] 258 CSGID 6-222 -9.780 9 IDP05036 hypothetical protein BA_1663 [Bacillus anthracis str. Ames] BA_1663 [Bacillus anthracis str. Ames]
32-119 -13.800 14 IDP06125 DNA-binding protein HU [Helicobacter pylori J99] NP_223492 [Helicobacter pylori J99]
4 gi|29345414|ref|NP_808917.1| hypothetical protein BT_0004 [Bacteroides thetaiotaomicron VPI-5482] 222 CSGID 24-155 -6.100 15 IDP06398 gene: ORF52; ORF52 [Human herpesvirus 8] YP_001129405 [Human herpesvirus 8]
5 gi|29345415|ref|NP_808918.1| 30S ribosomal protein S17 BT_0005 [Bacteroides thetaiotaomicron VPI-5482] 178 CSGID 1-56 -6.930 13 IDP91669 AGSK1_HUMAN [Homo sapiens]
6 gi|29345416|ref|NP_808919.1| hypothetical protein BT_0006 [Bacteroides thetaiotaomicron VPI-5482] 148 CSGID 1-143 -7.390 7 IDP05460 putative lipoprotein [Bacillus anthracis str. Ames] BA_0985 [Bacillus anthracis str. Ames]
7 gi|29345417|ref|NP_808920.1| hypothetical protein BT_0007 [Bacteroides thetaiotaomicron VPI-5482] 130 CSGID 23-119 -6.430 10 IDP92084 DNA-directed RNA polymerase III subunit, putative [Toxoplasma gondii ME49] TGME49_112250 [Toxoplasma gondii ME49]
8 gi|29345418|ref|NP_808921.1| hypothetical protein BT_0008 [Bacteroides thetaiotaomicron VPI-5482] 181 CSGID 1-181 -24.700 14 IDP92633 gene: yafP; predicted acyltransferase with acyl-CoA N-acyltransferase domain [Escherichia coli str. K-12 substr. MG1655] b0234 [Escherichia coli str. K-12 substr. MG1655]
9 gi|29345419|ref|NP_808922.1|(removed signal:1-26) phosphate-binding periplasmic protein precursor, putative ABC transporter BT_0009 [Bacteroides thetaiotaomicron VPI-5482] 343 CSGID 1-332 -64.700 13 IDP91442 ABC-type phosphate transport system, periplasmic component [Vibrio vulnificus CMCP6] VV1_0466 [Vibrio vulnificus CMCP6]
10 gi|29345420|ref|NP_808923.1| hypothetical protein BT_0010 [Bacteroides thetaiotaomicron VPI-5482] 357 CSGID 237-356 -7.260 13 IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]
11 gi|29345421|ref|NP_808924.1| hypothetical protein BT_0011 [Bacteroides thetaiotaomicron VPI-5482] 282 CSGID 204-257 -8.100 29 CPX_91754_91753 Complex of TVB1_HUMAN with TSST_STAAU [Undefined organism]
12 gi|29345422|ref|NP_808925.1|(removed signal:1-34) hypothetical protein BT_0012 [Bacteroides thetaiotaomicron VPI-5482] 354 CSGID 10-276 -9.170 10 IDP06511 gene: fms12; LPXTG family cell surface protein Fms12 [Enterococcus faecium DO] AFK58171 [Enterococcus faecium DO]
13 gi|29345423|ref|NP_808926.1| hypothetical protein BT_0013 [Bacteroides thetaiotaomicron VPI-5482] 180 CSGID 1-114 -6.110 13 IDP01226 Peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) BA_4187 [Bacillus anthracis str. Ames]
14 gi|29345424|ref|NP_808927.1| two-component system histidine kinase with response regulator receiver domain BT_0014 [Bacteroides thetaiotaomicron VPI-5482] 807 CSGID 20-797 -113.000 17 IDP91425 aerobic respiration control sensor protein ArcB [Vibrio vulnificus CMCP6] VV1_0550 [Vibrio vulnificus CMCP6]
170-801 -116.000 18 IDP04166 sensory box sensor histidine kinase/response regulator VieS [Vibrio cholerae O1 biovar eltor str. N16961] VC1653 [Vibrio cholerae O1 biovar El Tor str. N16961]
15 gi|29345425|ref|NP_808928.1| rteB, two-component system response regulator BT_0015 [Bacteroides thetaiotaomicron VPI-5482] 432 CSGID 2-432 -119.000 31 IDP91185 AAC46367 [Vibrio cholerae]
16 gi|29345426|ref|NP_808929.1| hypothetical protein BT_0016 [Bacteroides thetaiotaomicron VPI-5482] 212 CSGID 135-209 -7.480 6 IDP95119 gene: aadA; aminoglycoside resistance protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] YP_001338669 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
17 gi|29345427|ref|NP_808930.1| hypothetical protein BT_0017 [Bacteroides thetaiotaomicron VPI-5482] 315 CSGID 193-310 -7.450 12 IDP90316 gene: hctA; Histone-Like Developmental Protein [Chlamydia trachomatis D/UW-3/CX] CT_743 [Chlamydia trachomatis D/UW-3/CX]
18 gi|29345428|ref|NP_808931.1| hypothetical protein BT_0018 [Bacteroides thetaiotaomicron VPI-5482] 238 CSGID 3-132 -5.190 16 IDP90358 hypothetical protein CT273 [Chlamydia trachomatis D/UW-3/CX] CT273 [Chlamydia trachomatis D/UW-3/CX]
19 gi|29345429|ref|NP_808932.1| hypothetical protein BT_0019 [Bacteroides thetaiotaomicron VPI-5482] 106 CSGID 1-104 -5.370 10 IDP91498 translocation protein in type III secretion [Vibrio parahaemolyticus RIMD 2210633] VP1675 [Vibrio parahaemolyticus RIMD 2210633]
20 gi|29345430|ref|NP_808933.1| hypothetical protein BT_0020 [Bacteroides thetaiotaomicron VPI-5482] 152 CSGID 45-87 -6.810 20 IDP91328 ribonuclease G and E [Vibrio vulnificus CMCP6] VV2_0290 [Vibrio vulnificus CMCP6]

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|29345411\|ref\|NP_808914.1\| hypothetical protein BT_0001 [Bacteroides thetaiotaomicron VPI-5482]`	`205`	`CSGID`	`1-68`	`-7.050`	`17`	`IDP05443 hypothetical protein lmo0463 [Listeria monocytogenes EGD-e] lmo0463 [Listeria monocytogenes EGD-e]`
2	`gi\|29345412\|ref\|NP_808915.1\|(removed signal:1-19) hypothetical protein BT_0002 [Bacteroides thetaiotaomicron VPI-5482]`	`312`	`CSGID`	`1-125`	`-5.760`	`8`	`IDP05554 hypothetical protein CD3669 [Clostridium difficile 630] CD3669 [Peptoclostridium difficile 630]`
3	`gi\|29345413\|ref\|NP_808916.1\| hypothetical protein BT_0003 [Bacteroides thetaiotaomicron VPI-5482]`	`258`	`CSGID`	`6-222`	`-9.780`	`9`	`IDP05036 hypothetical protein BA_1663 [Bacillus anthracis str. Ames] BA_1663 [Bacillus anthracis str. Ames]`
				`32-119`	`-13.800`	`14`	`IDP06125 DNA-binding protein HU [Helicobacter pylori J99] NP_223492 [Helicobacter pylori J99]`
4	`gi\|29345414\|ref\|NP_808917.1\| hypothetical protein BT_0004 [Bacteroides thetaiotaomicron VPI-5482]`	`222`	`CSGID`	`24-155`	`-6.100`	`15`	`IDP06398 gene: ORF52; ORF52 [Human herpesvirus 8] YP_001129405 [Human herpesvirus 8]`
5	`gi\|29345415\|ref\|NP_808918.1\| 30S ribosomal protein S17 BT_0005 [Bacteroides thetaiotaomicron VPI-5482]`	`178`	`CSGID`	`1-56`	`-6.930`	`13`	`IDP91669 AGSK1_HUMAN [Homo sapiens]`
6	`gi\|29345416\|ref\|NP_808919.1\| hypothetical protein BT_0006 [Bacteroides thetaiotaomicron VPI-5482]`	`148`	`CSGID`	`1-143`	`-7.390`	`7`	`IDP05460 putative lipoprotein [Bacillus anthracis str. Ames] BA_0985 [Bacillus anthracis str. Ames]`
7	`gi\|29345417\|ref\|NP_808920.1\| hypothetical protein BT_0007 [Bacteroides thetaiotaomicron VPI-5482]`	`130`	`CSGID`	`23-119`	`-6.430`	`10`	`IDP92084 DNA-directed RNA polymerase III subunit, putative [Toxoplasma gondii ME49] TGME49_112250 [Toxoplasma gondii ME49]`
8	`gi\|29345418\|ref\|NP_808921.1\| hypothetical protein BT_0008 [Bacteroides thetaiotaomicron VPI-5482]`	`181`	`CSGID`	`1-181`	`-24.700`	`14`	`IDP92633 gene: yafP; predicted acyltransferase with acyl-CoA N-acyltransferase domain [Escherichia coli str. K-12 substr. MG1655] b0234 [Escherichia coli str. K-12 substr. MG1655]`
9	`gi\|29345419\|ref\|NP_808922.1\|(removed signal:1-26) phosphate-binding periplasmic protein precursor, putative ABC transporter BT_0009 [Bacteroides thetaiotaomicron VPI-5482]`	`343`	`CSGID`	`1-332`	`-64.700`	`13`	`IDP91442 ABC-type phosphate transport system, periplasmic component [Vibrio vulnificus CMCP6] VV1_0466 [Vibrio vulnificus CMCP6]`
10	`gi\|29345420\|ref\|NP_808923.1\| hypothetical protein BT_0010 [Bacteroides thetaiotaomicron VPI-5482]`	`357`	`CSGID`	`237-356`	`-7.260`	`13`	`IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]`
11	`gi\|29345421\|ref\|NP_808924.1\| hypothetical protein BT_0011 [Bacteroides thetaiotaomicron VPI-5482]`	`282`	`CSGID`	`204-257`	`-8.100`	`29`	`CPX_91754_91753 Complex of TVB1_HUMAN with TSST_STAAU [Undefined organism]`
12	`gi\|29345422\|ref\|NP_808925.1\|(removed signal:1-34) hypothetical protein BT_0012 [Bacteroides thetaiotaomicron VPI-5482]`	`354`	`CSGID`	`10-276`	`-9.170`	`10`	`IDP06511 gene: fms12; LPXTG family cell surface protein Fms12 [Enterococcus faecium DO] AFK58171 [Enterococcus faecium DO]`
13	`gi\|29345423\|ref\|NP_808926.1\| hypothetical protein BT_0013 [Bacteroides thetaiotaomicron VPI-5482]`	`180`	`CSGID`	`1-114`	`-6.110`	`13`	`IDP01226 Peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) BA_4187 [Bacillus anthracis str. Ames]`
14	`gi\|29345424\|ref\|NP_808927.1\| two-component system histidine kinase with response regulator receiver domain BT_0014 [Bacteroides thetaiotaomicron VPI-5482]`	`807`	`CSGID`	`20-797`	`-113.000`	`17`	`IDP91425 aerobic respiration control sensor protein ArcB [Vibrio vulnificus CMCP6] VV1_0550 [Vibrio vulnificus CMCP6]`
				`170-801`	`-116.000`	`18`	`IDP04166 sensory box sensor histidine kinase/response regulator VieS [Vibrio cholerae O1 biovar eltor str. N16961] VC1653 [Vibrio cholerae O1 biovar El Tor str. N16961]`
15	`gi\|29345425\|ref\|NP_808928.1\| rteB, two-component system response regulator BT_0015 [Bacteroides thetaiotaomicron VPI-5482]`	`432`	`CSGID`	`2-432`	`-119.000`	`31`	`IDP91185 AAC46367 [Vibrio cholerae]`
16	`gi\|29345426\|ref\|NP_808929.1\| hypothetical protein BT_0016 [Bacteroides thetaiotaomicron VPI-5482]`	`212`	`CSGID`	`135-209`	`-7.480`	`6`	`IDP95119 gene: aadA; aminoglycoside resistance protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] YP_001338669 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]`
17	`gi\|29345427\|ref\|NP_808930.1\| hypothetical protein BT_0017 [Bacteroides thetaiotaomicron VPI-5482]`	`315`	`CSGID`	`193-310`	`-7.450`	`12`	`IDP90316 gene: hctA; Histone-Like Developmental Protein [Chlamydia trachomatis D/UW-3/CX] CT_743 [Chlamydia trachomatis D/UW-3/CX]`
18	`gi\|29345428\|ref\|NP_808931.1\| hypothetical protein BT_0018 [Bacteroides thetaiotaomicron VPI-5482]`	`238`	`CSGID`	`3-132`	`-5.190`	`16`	`IDP90358 hypothetical protein CT273 [Chlamydia trachomatis D/UW-3/CX] CT273 [Chlamydia trachomatis D/UW-3/CX]`
19	`gi\|29345429\|ref\|NP_808932.1\| hypothetical protein BT_0019 [Bacteroides thetaiotaomicron VPI-5482]`	`106`	`CSGID`	`1-104`	`-5.370`	`10`	`IDP91498 translocation protein in type III secretion [Vibrio parahaemolyticus RIMD 2210633] VP1675 [Vibrio parahaemolyticus RIMD 2210633]`
20	`gi\|29345430\|ref\|NP_808933.1\| hypothetical protein BT_0020 [Bacteroides thetaiotaomicron VPI-5482]`	`152`	`CSGID`	`45-87`	`-6.810`	`20`	`IDP91328 ribonuclease G and E [Vibrio vulnificus CMCP6] VV2_0290 [Vibrio vulnificus CMCP6]`