FFAS03 list of results B.thetaiotaomicron / HGM

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 4778 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|29345411|ref|NP_808914.1| hypothetical protein BT_0001 [Bacteroides thetaiotaomicron VPI-5482] 205 HGM_OVER 1-106 -4.270 8 HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;
2 gi|29345412|ref|NP_808915.1|(removed signal:1-19) hypothetical protein BT_0002 [Bacteroides thetaiotaomicron VPI-5482] 312 HGM_OVER 1-169 -4.530 8 PB012823 Q5LCS8_BACFN/1-272 PB012823; Pfam-B_12823;
3 gi|29345413|ref|NP_808916.1| hypothetical protein BT_0003 [Bacteroides thetaiotaomicron VPI-5482] 258 HGM_OVER 49-213 -4.550 9 PB017610 Q11T14_CYTH3/22-188 PB017610; Pfam-B_17610;
4 gi|29345414|ref|NP_808917.1| hypothetical protein BT_0004 [Bacteroides thetaiotaomicron VPI-5482] 222 HGM_OVER 1-170 -4.010 9 PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;
5 gi|29345415|ref|NP_808918.1| 30S ribosomal protein S17 BT_0005 [Bacteroides thetaiotaomicron VPI-5482] 178 HGM_OVER 1-23 -5.030 26 PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;
6 gi|29345416|ref|NP_808919.1| hypothetical protein BT_0006 [Bacteroides thetaiotaomicron VPI-5482] 148 HGM_OVER 1-49 -10.000 18 HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;
7 gi|29345417|ref|NP_808920.1| hypothetical protein BT_0007 [Bacteroides thetaiotaomicron VPI-5482] 130 HGM_OVER 49-117 -5.380 15 PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;
8 gi|29345418|ref|NP_808921.1| hypothetical protein BT_0008 [Bacteroides thetaiotaomicron VPI-5482] 181 HGM_OVER 14-125 -2.960 13 PB012472 gi|62259485|gb|AAX77857.1| unknown protein [synthetic construct]
9 gi|29345419|ref|NP_808922.1|(removed signal:1-26) phosphate-binding periplasmic protein precursor, putative ABC transporter BT_0009 [Bacteroides thetaiotaomicron VPI-5482] 343 HGM_OVER 2-138 -6.580 5 PB019279 Q5LE73_BACFN/1-147 PB019279; Pfam-B_19279;
10 gi|29345420|ref|NP_808923.1| hypothetical protein BT_0010 [Bacteroides thetaiotaomicron VPI-5482] 357 HGM_OVER 209-356 -3.870 10 PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;
11 gi|29345421|ref|NP_808924.1| hypothetical protein BT_0011 [Bacteroides thetaiotaomicron VPI-5482] 282 HGM_OVER 131-275 -4.170 13 PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;
12 gi|29345422|ref|NP_808925.1|(removed signal:1-34) hypothetical protein BT_0012 [Bacteroides thetaiotaomicron VPI-5482] 354 HGM_OVER 14-202 -4.060 11 PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;
13 gi|29345423|ref|NP_808926.1| hypothetical protein BT_0013 [Bacteroides thetaiotaomicron VPI-5482] 180 HGM_OVER 1-180 -4.250 8 PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;
14 gi|29345424|ref|NP_808927.1| two-component system histidine kinase with response regulator receiver domain BT_0014 [Bacteroides thetaiotaomicron VPI-5482] 807 HGM_OVER 435-670 -3.250 12 PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;
15 gi|29345425|ref|NP_808928.1| rteB, two-component system response regulator BT_0015 [Bacteroides thetaiotaomicron VPI-5482] 432 HGM_OVER 4-282 -3.340 10 PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)
16 gi|29345426|ref|NP_808929.1| hypothetical protein BT_0016 [Bacteroides thetaiotaomicron VPI-5482] 212 HGM_OVER 133-212 -5.230 5 HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;
17 gi|29345427|ref|NP_808930.1| hypothetical protein BT_0017 [Bacteroides thetaiotaomicron VPI-5482] 315 HGM_OVER 222-315 -4.160 6 PB036876 Q56VH6_BACFR/1-141 PB036876; Pfam-B_36876;
18 gi|29345428|ref|NP_808931.1| hypothetical protein BT_0018 [Bacteroides thetaiotaomicron VPI-5482] 238 HGM_OVER 2-191 -3.900 7 PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)
19 gi|29345429|ref|NP_808932.1| hypothetical protein BT_0019 [Bacteroides thetaiotaomicron VPI-5482] 106 HGM_OVER 8-106 -3.610 7 PB008806 Q5L9W8_BACFN/1-127 PB008806; Pfam-B_8806;
20 gi|29345430|ref|NP_808933.1| hypothetical protein BT_0020 [Bacteroides thetaiotaomicron VPI-5482] 152 HGM_OVER 35-90 -3.210 7 PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823;

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|29345411\|ref\|NP_808914.1\| hypothetical protein BT_0001 [Bacteroides thetaiotaomicron VPI-5482]`	`205`	`HGM_OVER`	`1-106`	`-4.270`	`8`	`HGC00509 gi\|162658693\|dbj\|BAAX01000912.1\|3.0 TMP00561;`
2	`gi\|29345412\|ref\|NP_808915.1\|(removed signal:1-19) hypothetical protein BT_0002 [Bacteroides thetaiotaomicron VPI-5482]`	`312`	`HGM_OVER`	`1-169`	`-4.530`	`8`	`PB012823 Q5LCS8_BACFN/1-272 PB012823; Pfam-B_12823;`
3	`gi\|29345413\|ref\|NP_808916.1\| hypothetical protein BT_0003 [Bacteroides thetaiotaomicron VPI-5482]`	`258`	`HGM_OVER`	`49-213`	`-4.550`	`9`	`PB017610 Q11T14_CYTH3/22-188 PB017610; Pfam-B_17610;`
4	`gi\|29345414\|ref\|NP_808917.1\| hypothetical protein BT_0004 [Bacteroides thetaiotaomicron VPI-5482]`	`222`	`HGM_OVER`	`1-170`	`-4.010`	`9`	`PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;`
5	`gi\|29345415\|ref\|NP_808918.1\| 30S ribosomal protein S17 BT_0005 [Bacteroides thetaiotaomicron VPI-5482]`	`178`	`HGM_OVER`	`1-23`	`-5.030`	`26`	`PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;`
6	`gi\|29345416\|ref\|NP_808919.1\| hypothetical protein BT_0006 [Bacteroides thetaiotaomicron VPI-5482]`	`148`	`HGM_OVER`	`1-49`	`-10.000`	`18`	`HGC01056 gi\|162659434\|dbj\|BAAX01000171.1\|2.0 TMP01455;`
7	`gi\|29345417\|ref\|NP_808920.1\| hypothetical protein BT_0007 [Bacteroides thetaiotaomicron VPI-5482]`	`130`	`HGM_OVER`	`49-117`	`-5.380`	`15`	`PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;`
8	`gi\|29345418\|ref\|NP_808921.1\| hypothetical protein BT_0008 [Bacteroides thetaiotaomicron VPI-5482]`	`181`	`HGM_OVER`	`14-125`	`-2.960`	`13`	`PB012472 gi\|62259485\|gb\|AAX77857.1\| unknown protein [synthetic construct]`
9	`gi\|29345419\|ref\|NP_808922.1\|(removed signal:1-26) phosphate-binding periplasmic protein precursor, putative ABC transporter BT_0009 [Bacteroides thetaiotaomicron VPI-5482]`	`343`	`HGM_OVER`	`2-138`	`-6.580`	`5`	`PB019279 Q5LE73_BACFN/1-147 PB019279; Pfam-B_19279;`
10	`gi\|29345420\|ref\|NP_808923.1\| hypothetical protein BT_0010 [Bacteroides thetaiotaomicron VPI-5482]`	`357`	`HGM_OVER`	`209-356`	`-3.870`	`10`	`PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;`
11	`gi\|29345421\|ref\|NP_808924.1\| hypothetical protein BT_0011 [Bacteroides thetaiotaomicron VPI-5482]`	`282`	`HGM_OVER`	`131-275`	`-4.170`	`13`	`PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;`
12	`gi\|29345422\|ref\|NP_808925.1\|(removed signal:1-34) hypothetical protein BT_0012 [Bacteroides thetaiotaomicron VPI-5482]`	`354`	`HGM_OVER`	`14-202`	`-4.060`	`11`	`PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;`
13	`gi\|29345423\|ref\|NP_808926.1\| hypothetical protein BT_0013 [Bacteroides thetaiotaomicron VPI-5482]`	`180`	`HGM_OVER`	`1-180`	`-4.250`	`8`	`PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;`
14	`gi\|29345424\|ref\|NP_808927.1\| two-component system histidine kinase with response regulator receiver domain BT_0014 [Bacteroides thetaiotaomicron VPI-5482]`	`807`	`HGM_OVER`	`435-670`	`-3.250`	`12`	`PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;`
15	`gi\|29345425\|ref\|NP_808928.1\| rteB, two-component system response regulator BT_0015 [Bacteroides thetaiotaomicron VPI-5482]`	`432`	`HGM_OVER`	`4-282`	`-3.340`	`10`	`PB162065 _Gut.Meta.Jp.0089312_ gi\|162832207\|dbj\|BABA01012502.1\|\|1 (- 0:1326~0 complete)`
16	`gi\|29345426\|ref\|NP_808929.1\| hypothetical protein BT_0016 [Bacteroides thetaiotaomicron VPI-5482]`	`212`	`HGM_OVER`	`133-212`	`-5.230`	`5`	`HGC01024 gi\|162869036\|dbj\|BABB01000971.1\|4.0 TMP01399;`
17	`gi\|29345427\|ref\|NP_808930.1\| hypothetical protein BT_0017 [Bacteroides thetaiotaomicron VPI-5482]`	`315`	`HGM_OVER`	`222-315`	`-4.160`	`6`	`PB036876 Q56VH6_BACFR/1-141 PB036876; Pfam-B_36876;`
18	`gi\|29345428\|ref\|NP_808931.1\| hypothetical protein BT_0018 [Bacteroides thetaiotaomicron VPI-5482]`	`238`	`HGM_OVER`	`2-191`	`-3.900`	`7`	`PB000790 _Gut.Meta.Jp.0111831_ gi\|163310496\|dbj\|BABD01000203.1\|\|3 (- 2591:4589~0 complete)`
19	`gi\|29345429\|ref\|NP_808932.1\| hypothetical protein BT_0019 [Bacteroides thetaiotaomicron VPI-5482]`	`106`	`HGM_OVER`	`8-106`	`-3.610`	`7`	`PB008806 Q5L9W8_BACFN/1-127 PB008806; Pfam-B_8806;`
20	`gi\|29345430\|ref\|NP_808933.1\| hypothetical protein BT_0020 [Bacteroides thetaiotaomicron VPI-5482]`	`152`	`HGM_OVER`	`35-90`	`-3.210`	`7`	`PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823;`