FFAS03 list of results C.acetobutylicum / CSGID

Shows best template from each database, and all templates with significant scores covering different query fragments

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# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15894240|ref|NP_347589.1| hypothetical protein (CA_C0953) [Clostridium acetobutylicum ATCC 824] 132 CSGID 2-132 -5.120 12 IDP00762 staphylocoagulase precursor SACOL0209 [Staphylococcus aureus subsp. aureus COL]
2 gi|15895268|ref|NP_348617.1| ABC-type transport system, ATPase component (CA_C1998) [Clostridium acetobutylicum ATCC 824] 224 CSGID 4-224 -110.000 42 IDP02070 ABC transporter, ATP-binding protein [Coxiella burnetii RSA 493] CBU_1809 [Coxiella burnetii RSA 493]
3 gi|15895079|ref|NP_348428.1| ribosome-binding factor A (CA_C1803) [Clostridium acetobutylicum ATCC 824] 121 CSGID 3-119 -54.300 26 IDP06174 gene: rbfA; ribosome-binding factor A [Helicobacter pylori J99] NP_223097 [Helicobacter pylori J99]
4 gi|15896238|ref|NP_349587.1| dimethyladenosine transferase (CA_C2986) [Clostridium acetobutylicum ATCC 824] 276 CSGID 1-276 -112.000 68 IDP04517 gene: ksgA; dimethyladenosine transferase [Clostridium perfringens ATCC 13124] CPF_2840 [Clostridium perfringens ATCC 13124]
5 gi|15894673|ref|NP_348022.1| phosphoribosylglycinamide formyltransferase (CA_C1394) [Clostridium acetobutylicum ATCC 824] 204 CSGID 1-204 -88.500 55 IDP04229 gene: purN; phosphoribosylglycinamide formyltransferase [Clostridium perfringens ATCC 13124] CPF_0676 [Clostridium perfringens ATCC 13124]
6 gi|15894664|ref|NP_348013.1| Alpha-ribazole-5'-phosphate phosphatase, CobC (CA_C1385) [Clostridium acetobutylicum ATCC 824] 191 CSGID 2-191 -90.900 31 IDP90806 gene: phpB; alpha-ribazole phosphatase [Shigella flexneri 2a str. 2457T] S0665 [Shigella flexneri 2a str. 2457T]
7 gi|15894369|ref|NP_347718.1| Beta-glucosidase family protein (CA_C1084) [Clostridium acetobutylicum ATCC 824] 474 CSGID 2-471 -136.000 37 IDP04454 gene: bglA; 6-phospho-beta-glucosidase [Yersinia pestis CO92] YPO1254 [Yersinia pestis CO92]
8 gi|15896898|ref|NP_350247.1| alpha/beta fold family hydrolase (CA_C3665) [Clostridium acetobutylicum ATCC 824] 265 CSGID 4-264 -44.700 18 IDP06504 Surface protein from Gram-positive cocci, anchor region [Enterococcus faecium DO] EAN10897 [Enterococcus faecium DO]
9 gi|15895531|ref|NP_348880.1| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] 500 CSGID 5-498 -43.400 13 IDP05220 putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1101 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]
10 gi|15895531|ref|NP_348880.1| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] 500 CSGID 42-429 -40.300 12 IDP04218 gene: recC; exonuclease V subunit gamma [Salmonella typhimurium LT2] STM2996_1_1123 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
11 gi|15895531|ref|NP_348880.1| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] 500 CSGID 2-431 -12.100 10 IDP04218 gene: recC; exonuclease V subunit gamma [Salmonella typhimurium LT2] STM2996_1_1123 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
419-494 -13.500 17 IDP92662 hypothetical protein LPW_01811 [Legionella pneumophila 130b] CBW98325 [Legionella pneumophila 130b]
12 gi|15895531|ref|NP_348880.1| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] 403 CSGID 169-363 -17.700 16 IDP92662 hypothetical protein LPW_01811 [Legionella pneumophila 130b] CBW98325 [Legionella pneumophila 130b]
13 gi|15895492|ref|NP_348841.1| chemotaxis protein CheW (CA_C2224) [Clostridium acetobutylicum ATCC 824] 147 CSGID 2-147 -72.200 32 IDP00100 gene: cheW; positive regulator of CheA protein activity NT01SF2345 [Shigella flexneri 2a str. 2457T]
14 gi|15894672|ref|NP_348021.1| phosphoribosylaminoimidazole synthetase (CA_C1393) [Clostridium acetobutylicum ATCC 824] 332 CSGID 1-332 -101.000 69 IDP04228 gene: purM; phosphoribosylaminoimidazole synthetase [Clostridium perfringens ATCC 13124] CPF_0675 [Clostridium perfringens ATCC 13124]
15 gi|15893880|ref|NP_347229.1| riboflavin synthase subunit alpha (CA_C0591) [Clostridium acetobutylicum ATCC 824] 213 CSGID 1-212 -96.100 46 IDP05517 gene: ribB; riboflavin synthase subunit alpha [Clostridium difficile 630] CD1699 [Peptoclostridium difficile 630]
16 gi|15893578|ref|NP_346927.1| hypothetical protein (CA_C0286) [Clostridium acetobutylicum ATCC 824] 244 CSGID 1-241 -14.700 10 IDP00178 putative ABC transporter, integral membrane protein YPO3405 [Yersinia pestis CO92]
17 gi|15896862|ref|NP_350211.1| oligopeptide ABC transporter, ATPase component (CA_C3628) [Clostridium acetobutylicum ATCC 824] 322 CSGID 7-322 -125.000 52 IDP01146 oligopeptide ABC transporter, ATP-binding protein BA_0235 [Bacillus anthracis str. Ames]
18 gi|15895331|ref|NP_348680.1| segregation and condensation protein A (CA_C2061) [Clostridium acetobutylicum ATCC 824] 249 CSGID 44-108 -5.940 13 IDP91730 gene: CCL28; C-C motif chemokine 28 precursor [Homo sapiens] NP_683513 [Homo sapiens]
19 gi|15894096|ref|NP_347445.1| hydrogenase formation factor (hypE) (CA_C0809) [Clostridium acetobutylicum ATCC 824] 335 CSGID 14-333 -66.700 17 IDP00521 gene: thiL; thiamine monophosphate kinase YPO3180 [Yersinia pestis CO92]
20 gi|15895945|ref|NP_349294.1| DNA helicase (CA_C2687) [Clostridium acetobutylicum ATCC 824] 714 CSGID 1-344 -33.800 19 IDP06316 DEAD/DEAH box helicase [Streptococcus pneumoniae TIGR4] NP_345259 [Streptococcus pneumoniae TIGR4]
2-191 -68.700 30 IDP05084 putative ATP-dependent DNA helicase (together with adjacent 3 orfs) [Escherichia coli O157:H7 EDL933] Z4803 [Escherichia coli O157:H7 str. EDL933]
5-382 -11.100 18 IDP01191 Protein translocase subunit secA 2 BA_0882 [Bacillus anthracis str. Ames]

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|15894240\|ref\|NP_347589.1\| hypothetical protein (CA_C0953) [Clostridium acetobutylicum ATCC 824]`	`132`	`CSGID`	`2-132`	`-5.120`	`12`	`IDP00762 staphylocoagulase precursor SACOL0209 [Staphylococcus aureus subsp. aureus COL]`
2	`gi\|15895268\|ref\|NP_348617.1\| ABC-type transport system, ATPase component (CA_C1998) [Clostridium acetobutylicum ATCC 824]`	`224`	`CSGID`	`4-224`	`-110.000`	`42`	`IDP02070 ABC transporter, ATP-binding protein [Coxiella burnetii RSA 493] CBU_1809 [Coxiella burnetii RSA 493]`
3	`gi\|15895079\|ref\|NP_348428.1\| ribosome-binding factor A (CA_C1803) [Clostridium acetobutylicum ATCC 824]`	`121`	`CSGID`	`3-119`	`-54.300`	`26`	`IDP06174 gene: rbfA; ribosome-binding factor A [Helicobacter pylori J99] NP_223097 [Helicobacter pylori J99]`
4	`gi\|15896238\|ref\|NP_349587.1\| dimethyladenosine transferase (CA_C2986) [Clostridium acetobutylicum ATCC 824]`	`276`	`CSGID`	`1-276`	`-112.000`	`68`	`IDP04517 gene: ksgA; dimethyladenosine transferase [Clostridium perfringens ATCC 13124] CPF_2840 [Clostridium perfringens ATCC 13124]`
5	`gi\|15894673\|ref\|NP_348022.1\| phosphoribosylglycinamide formyltransferase (CA_C1394) [Clostridium acetobutylicum ATCC 824]`	`204`	`CSGID`	`1-204`	`-88.500`	`55`	`IDP04229 gene: purN; phosphoribosylglycinamide formyltransferase [Clostridium perfringens ATCC 13124] CPF_0676 [Clostridium perfringens ATCC 13124]`
6	`gi\|15894664\|ref\|NP_348013.1\| Alpha-ribazole-5'-phosphate phosphatase, CobC (CA_C1385) [Clostridium acetobutylicum ATCC 824]`	`191`	`CSGID`	`2-191`	`-90.900`	`31`	`IDP90806 gene: phpB; alpha-ribazole phosphatase [Shigella flexneri 2a str. 2457T] S0665 [Shigella flexneri 2a str. 2457T]`
7	`gi\|15894369\|ref\|NP_347718.1\| Beta-glucosidase family protein (CA_C1084) [Clostridium acetobutylicum ATCC 824]`	`474`	`CSGID`	`2-471`	`-136.000`	`37`	`IDP04454 gene: bglA; 6-phospho-beta-glucosidase [Yersinia pestis CO92] YPO1254 [Yersinia pestis CO92]`
8	`gi\|15896898\|ref\|NP_350247.1\| alpha/beta fold family hydrolase (CA_C3665) [Clostridium acetobutylicum ATCC 824]`	`265`	`CSGID`	`4-264`	`-44.700`	`18`	`IDP06504 Surface protein from Gram-positive cocci, anchor region [Enterococcus faecium DO] EAN10897 [Enterococcus faecium DO]`
9	`gi\|15895531\|ref\|NP_348880.1\| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824]`	`500`	`CSGID`	`5-498`	`-43.400`	`13`	`IDP05220 putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1101 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]`
10	`gi\|15895531\|ref\|NP_348880.1\| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824]`	`500`	`CSGID`	`42-429`	`-40.300`	`12`	`IDP04218 gene: recC; exonuclease V subunit gamma [Salmonella typhimurium LT2] STM2996_1_1123 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`
11	`gi\|15895531\|ref\|NP_348880.1\| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824]`	`500`	`CSGID`	`2-431`	`-12.100`	`10`	`IDP04218 gene: recC; exonuclease V subunit gamma [Salmonella typhimurium LT2] STM2996_1_1123 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`
				`419-494`	`-13.500`	`17`	`IDP92662 hypothetical protein LPW_01811 [Legionella pneumophila 130b] CBW98325 [Legionella pneumophila 130b]`
12	`gi\|15895531\|ref\|NP_348880.1\| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824]`	`403`	`CSGID`	`169-363`	`-17.700`	`16`	`IDP92662 hypothetical protein LPW_01811 [Legionella pneumophila 130b] CBW98325 [Legionella pneumophila 130b]`
13	`gi\|15895492\|ref\|NP_348841.1\| chemotaxis protein CheW (CA_C2224) [Clostridium acetobutylicum ATCC 824]`	`147`	`CSGID`	`2-147`	`-72.200`	`32`	`IDP00100 gene: cheW; positive regulator of CheA protein activity NT01SF2345 [Shigella flexneri 2a str. 2457T]`
14	`gi\|15894672\|ref\|NP_348021.1\| phosphoribosylaminoimidazole synthetase (CA_C1393) [Clostridium acetobutylicum ATCC 824]`	`332`	`CSGID`	`1-332`	`-101.000`	`69`	`IDP04228 gene: purM; phosphoribosylaminoimidazole synthetase [Clostridium perfringens ATCC 13124] CPF_0675 [Clostridium perfringens ATCC 13124]`
15	`gi\|15893880\|ref\|NP_347229.1\| riboflavin synthase subunit alpha (CA_C0591) [Clostridium acetobutylicum ATCC 824]`	`213`	`CSGID`	`1-212`	`-96.100`	`46`	`IDP05517 gene: ribB; riboflavin synthase subunit alpha [Clostridium difficile 630] CD1699 [Peptoclostridium difficile 630]`
16	`gi\|15893578\|ref\|NP_346927.1\| hypothetical protein (CA_C0286) [Clostridium acetobutylicum ATCC 824]`	`244`	`CSGID`	`1-241`	`-14.700`	`10`	`IDP00178 putative ABC transporter, integral membrane protein YPO3405 [Yersinia pestis CO92]`
17	`gi\|15896862\|ref\|NP_350211.1\| oligopeptide ABC transporter, ATPase component (CA_C3628) [Clostridium acetobutylicum ATCC 824]`	`322`	`CSGID`	`7-322`	`-125.000`	`52`	`IDP01146 oligopeptide ABC transporter, ATP-binding protein BA_0235 [Bacillus anthracis str. Ames]`
18	`gi\|15895331\|ref\|NP_348680.1\| segregation and condensation protein A (CA_C2061) [Clostridium acetobutylicum ATCC 824]`	`249`	`CSGID`	`44-108`	`-5.940`	`13`	`IDP91730 gene: CCL28; C-C motif chemokine 28 precursor [Homo sapiens] NP_683513 [Homo sapiens]`
19	`gi\|15894096\|ref\|NP_347445.1\| hydrogenase formation factor (hypE) (CA_C0809) [Clostridium acetobutylicum ATCC 824]`	`335`	`CSGID`	`14-333`	`-66.700`	`17`	`IDP00521 gene: thiL; thiamine monophosphate kinase YPO3180 [Yersinia pestis CO92]`
20	`gi\|15895945\|ref\|NP_349294.1\| DNA helicase (CA_C2687) [Clostridium acetobutylicum ATCC 824]`	`714`	`CSGID`	`1-344`	`-33.800`	`19`	`IDP06316 DEAD/DEAH box helicase [Streptococcus pneumoniae TIGR4] NP_345259 [Streptococcus pneumoniae TIGR4]`
				`2-191`	`-68.700`	`30`	`IDP05084 putative ATP-dependent DNA helicase (together with adjacent 3 orfs) [Escherichia coli O157:H7 EDL933] Z4803 [Escherichia coli O157:H7 str. EDL933]`
				`5-382`	`-11.100`	`18`	`IDP01191 Protein translocase subunit secA 2 BA_0882 [Bacillus anthracis str. Ames]`