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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 968< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|15604737|ref|NP_219521.1| isoleucyl-tRNA synthetase (CT019) [Chlamydia trachomatis D/UW-3/CX] 500 HGM_OVER 168-278 -3.420 10  PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;
22 gi|15604737|ref|NP_219521.1| isoleucyl-tRNA synthetase (CT019) [Chlamydia trachomatis D/UW-3/CX] 500 HGM_OVER 37-240 -3.250 PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823;
23 gi|15604737|ref|NP_219521.1| isoleucyl-tRNA synthetase (CT019) [Chlamydia trachomatis D/UW-3/CX] 286 HGM_OVER 7-285 -3.860 10  PB001232 gi|126647001|ref|ZP_01719511.1| hypothetical protein ALPR1_19713 [Algoriphagus sp. PR1]gi|126577049|gb|EAZ81297.1| hypothetical protein ALPR1_19713 [Algoriphagus sp. PR1]
24 gi|15604738|ref|NP_219522.1| signal peptidase I (CT020) [Chlamydia trachomatis D/UW-3/CX] 628 HGM_OVER 41-201 -5.640 PB015266 gi|154494998|ref|ZP_02034003.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]gi|154085548|gb|EDN84593.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]
25 gi|15604739|ref|NP_219523.1|(removed signalp:1-31) hypothetical protein (CT021) [Chlamydia trachomatis D/UW-3/CX] 216 HGM_OVER 13-162 -4.990 PB019279 Q5LE73_BACFN/1-147 PB019279; Pfam-B_19279;
26 gi|15604740|ref|NP_219524.1| 50S ribosomal protein L31 type B (CT022) [Chlamydia trachomatis D/UW-3/CX] 108 HGM_OVER 38-92 -4.320 13  PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;
27 gi|15604741|ref|NP_219525.1| peptide chain release factor 1 (CT023) [Chlamydia trachomatis D/UW-3/CX] 359 HGM_OVER 102-328 -3.640 PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;
28 gi|15604742|ref|NP_219526.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (CT024) [Chlamydia trachomatis D/UW-3/CX] 290 HGM_OVER 89-270 -3.370 10  PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]
29 gi|15604743|ref|NP_219527.1| signal recognition particle, subunit FFH/SRP54 (CT025) [Chlamydia trachomatis D/UW-3/CX] 448 HGM_OVER 268-441 -3.010 PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]
30 gi|15604744|ref|NP_219528.1| 30S ribosomal protein S16 (CT026) [Chlamydia trachomatis D/UW-3/CX] 116 HGM_OVER 32-116 -4.810 10  PB019278 gi|154508461|ref|ZP_02044103.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi|153798095|gb|EDN80515.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]
31 gi|15604745|ref|NP_219529.1| fused tRNA (guanine-N(1)-)-methyltransferase/uncharacterized domain-containing protein (CT027) [Chlamydia trachomatis D/UW-3/CX] 352 HGM_OVER 80-241 -3.890 PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;
32 gi|15604746|ref|NP_219530.1| 50S ribosomal protein L19 (CT028) [Chlamydia trachomatis D/UW-3/CX] 121 HGM_OVER 2-102 -5.720 22  HGC00787 gi|162657578|dbj|BAAX01002027.1|2.0 TMP01033;
33 gi|15604747|ref|NP_219531.1| ribonuclease HII (CT029) [Chlamydia trachomatis D/UW-3/CX] 217 HGM_OVER 33-135 -3.660 12  HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;
34 gi|15604748|ref|NP_219532.1| guanylate kinase (CT030) [Chlamydia trachomatis D/UW-3/CX] 205 HGM_OVER 32-205 -4.560 14  PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;
35 gi|15604749|ref|NP_219533.1| hypothetical protein (CT031) [Chlamydia trachomatis D/UW-3/CX] 100 HGM_OVER 39-99 -3.030 21  PB009661 _Gut.Meta.Jp.0000785_ gi|162567239|dbj|BAAU01000237.1||2 (- 3549:4008~0 complete)
36 gi|15604750|ref|NP_219534.1| methionyl-tRNA synthetase (CT032) [Chlamydia trachomatis D/UW-3/CX] 550 HGM_OVER 126-203 -4.700 12  HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;
37 gi|15604751|ref|NP_219535.1| exodeoxyribonuclease V alpha chain (CT033) [Chlamydia trachomatis D/UW-3/CX] 746 HGM_OVER 380-742 -5.740 11  PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;
38 gi|15604752|ref|NP_219536.1| cationic amino acid transporter (CT034) [Chlamydia trachomatis D/UW-3/CX] 341 HGM_OVER 103-179 -4.870 21  PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;
39 gi|15604753|ref|NP_219537.1| biotin protein ligase (CT035) [Chlamydia trachomatis D/UW-3/CX] 257 HGM_OVER 39-94 -3.840 19  PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]
40 gi|15604754|ref|NP_219538.1| hypothetical protein (CT036) [Chlamydia trachomatis D/UW-3/CX] 403 HGM_OVER 8-71 -4.150 25  HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;


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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Doctor KS, Reed JC, Godzik A., Bourne PE. The apoptosis database. Cell Death Differ. 2003 Jun;10(6):621-33. Review.