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Shows best template from each database, and all templates with significant scores covering different query fragments

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# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15604718|ref|NP_219502.1| hypothetical protein (CT875) [Chlamydia trachomatis D/UW-3/CX] 591 PDB1018 299-398 -6.940 13  3lmf_A mol:protein length:121 Uncharacterized protein
2 gi|15604719|ref|NP_219503.1| hypothetical protein (CT001) [Chlamydia trachomatis D/UW-3/CX] 90 PDB1018 4-90 -7.820 1kqf_C mol:protein length:217 FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, CYTOCHROME B556(FDN) SUBUNIT
3 gi|15604720|ref|NP_219504.1| aspartyl/glutamyl-tRNA amidotransferase subunit C (CT002) [Chlamydia trachomatis D/UW-3/CX] 100 PDB1018 2-100 -51.000 24  4wj3_C mol:protein length:104 Glutamyl-tRNA(Gln) amidotransferase subunit C
4 gi|15604721|ref|NP_219505.1| aspartyl/glutamyl-tRNA amidotransferase subunit A (CT003) [Chlamydia trachomatis D/UW-3/CX] 491 PDB1018 1-481 -138.000 44  2df4_A mol:protein length:485 Glutamyl-tRNA(Gln) amidotransferase subunit A
5 gi|15604722|ref|NP_219506.1| aspartyl/glutamyl-tRNA amidotransferase subunit B (CT004) [Chlamydia trachomatis D/UW-3/CX] 488 PDB1018 7-487 -149.000 41  2df4_B mol:protein length:483 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
6 gi|15604723|ref|NP_219507.1| hypothetical protein (CT005) [Chlamydia trachomatis D/UW-3/CX] 363 PDB1018 34-353 -11.600 6d4h_A mol:protein length:1455 Protein patched homolog 1
7 gi|15604724|ref|NP_219508.1| hypothetical protein (CT006) [Chlamydia trachomatis D/UW-3/CX] 189 PDB1018 100-189 -7.040 14  1bui_C mol:protein length:128 Staphylokinase
8 gi|15604725|ref|NP_219509.1| hypothetical protein (CT007) [Chlamydia trachomatis D/UW-3/CX] 316 PDB1018 1-316 -14.500 4rl9_A mol:protein length:255 Carbapenem-associated resistance protein
36-316 -20.900 2f1c_X mol:protein length:286 Outer membrane protein G
9 gi|15604726|ref|NP_219510.1| ribonuclease HIII (CT008) [Chlamydia trachomatis D/UW-3/CX] 300 PDB1018 2-300 -96.200 26  2d0a_A mol:protein length:310 ribonuclease HIII
10 gi|15604727|ref|NP_219511.1| HTH transcriptional regulator (CT009) [Chlamydia trachomatis D/UW-3/CX] 143 PDB1018 9-137 -51.700 19  3fym_A mol:protein length:130 Putative uncharacterized protein
11 gi|15604728|ref|NP_219512.1| lipid A biosynthesis lauroyl acyltransferase (CT010) [Chlamydia trachomatis D/UW-3/CX] 455 PDB1018 13-345 -90.600 18  5kn7_B mol:protein length:333 Lipid A biosynthesis lauroyl acyltransferase
12 gi|15604729|ref|NP_219513.1| hypothetical protein (CT011) [Chlamydia trachomatis D/UW-3/CX] 418 PDB1018 31-231 -34.700 4qdy_A mol:protein length:227 conserved hypothetical protein
13 gi|15604730|ref|NP_219514.1| hypothetical protein (CT012) [Chlamydia trachomatis D/UW-3/CX] 264 PDB1018 44-232 -74.200 32  2fb5_A mol:protein length:205 hypothetical Membrane Spanning Protein
79-264 -72.000 34  4rv7_A mol:protein length:192 Diadenylate cyclase
14 gi|15604731|ref|NP_219515.1| cytochrome d ubiquinol oxidase subunit I (CT013) [Chlamydia trachomatis D/UW-3/CX] 446 PDB1018 1-445 -130.000 27  5doq_A mol:protein length:448 Bd-type quinol oxidase subunit I
15 gi|15604732|ref|NP_219516.1| cytochrome d ubiquinol oxidase subunit II (CT014) [Chlamydia trachomatis D/UW-3/CX] 353 PDB1018 7-351 -92.800 17  5doq_B mol:protein length:342 Bd-type quinol oxidase subunit II
16 gi|15604733|ref|NP_219517.1| ATPase (CT015) [Chlamydia trachomatis D/UW-3/CX] 434 PDB1018 1-140 -27.200 19  2dok_A mol:protein length:186 Telomerase-binding protein EST1A
221-434 -72.400 29  3b85_A mol:protein length:208 Phosphate starvation-inducible protein
17 gi|15604734|ref|NP_219518.1| hypothetical protein (CT016) [Chlamydia trachomatis D/UW-3/CX] 242 PDB1018 65-237 -8.780 16  1jpy_A mol:protein length:137 interleukin 17F
18 gi|15604735|ref|NP_219519.1| hypothetical protein (CT017) [Chlamydia trachomatis D/UW-3/CX] 433 PDB1018 9-315 -19.200 10  4epc_A mol:protein length:334 N-acetylmuramoyl-L-alanine amidase
11-235 -22.300 5jqc_A mol:protein length:259 Lmo1076 protein
33-176 -28.200 13  3pvq_A mol:protein length:308 Dipeptidyl-peptidase VI
19 gi|15604736|ref|NP_219520.1| hypothetical protein (CT018) [Chlamydia trachomatis D/UW-3/CX] 157 PDB1018 17-140 -7.830 4yeu_A mol:protein length:312 Cys-loop ligand-gated ion channel,Proton-gated ion channel
20 gi|15604737|ref|NP_219521.1| isoleucyl-tRNA synthetase (CT019) [Chlamydia trachomatis D/UW-3/CX] 500 PDB1018 5-499 -126.000 42  1ile_A mol:protein length:821 ISOLEUCYL-TRNA SYNTHETASE

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Q, Zmasek CM, Dishaw LJ, Mueller MG, Ye Y, Litman GW, Godzik A. Novel genes dramatically alter regulatory network topology in amphioxus. Genome Biol.2008 Aug 4;9(8):R123.